RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 SDIM1Q6ZPB5 146 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 MRPL55Q7Z7F7 128 aaKnown RBP3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 C3orf56Q8N813 242 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 MAPKAPK5-AS1Q8N8E1 139 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 S1PR3Q99500 378 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 PHPT1Q9NRX4 125 aaPredicted RBP3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 Q9Y3F1 56 aa3.72□□□□□ -1.81
HMGB1P19-201ENST00000517578 HEATR1Q9H583 2144 aaKnown RBP3.71□□□□□ -1.81
HMGB1P19-201ENST00000517578 GON4LQ3T8J9 2241 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 TANC2Q9HCD6 1990 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 IGKV1-12A0A0C4DH73 117 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 C17orf100A8MU93 164 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 SPINT2O43291 252 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 PPP1R17O96001 155 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 IGKV1D-12P01611 117 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 IGLV2-14P01704 120 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 IGHV3-33P01772 117 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 CD70P32970 193 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 MYCNOSP40205 109 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 ZNF134P52741 427 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 LAGE3Q14657 143 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 Q1RN00 199 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 ZNF672Q499Z4 452 aaPredicted RBP3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 ORMDL2Q53FV1 153 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 FAM27BQ5VT28 67 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 LYPD1Q8N2G4 141 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 LINC00311Q8N616 119 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 SLC25A29Q8N8R3 303 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 SRSF12Q8WXF0 261 aaKnown RBP3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 GNG12Q9UBI6 72 aa3.71□□□□□ -1.82
HMGB1P19-201ENST00000517578 IGKV1-27A0A075B6S5 117 aa3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 TRAV26-2A0A0B4J265 109 aa3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 CXCL13O43927 109 aa3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 TCRAP04437 139 aa3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 DEFA4P12838 97 aa3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 TCF15Q12870 199 aa3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 C2orf83Q53S99 150 aa3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 ATP5EP2Q5VTU8 51 aa3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 CD164L2Q6UWJ8 174 aa3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 FAM19A1Q7Z5A9 133 aa3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 PRR15Q8IV56 129 aa3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 NEXN-AS1Q8NBZ9 246 aa3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 NUP37Q8NFH4 326 aa3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 WFDC5Q8TCV5 224 aa3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 BRK1Q8WUW1 75 aa3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 TMEM243Q9BU79 118 aa3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 RETNQ9HD89 108 aa3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 MRPL35Q9NZE8 188 aaKnown RBP3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 KLK5Q9Y337 293 aaPredicted RBP3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 AGRNO00468 2067 aa3.7□□□□□ -1.82
HMGB1P19-201ENST00000517578 ARHGEF17Q96PE2 2063 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 TRBV19A0A075B6N1 114 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 IGKV1D-43A0A0B4J1Z2 117 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 TRBV7-6A0A0J9YX20 115 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 LYRM9A8MSI8 78 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 KRTAP29-1A8MX34 341 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 INS-IGF2F8WCM5 200 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 H0YGG7 62 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 H7C423 109 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 NDUFB3O43676 98 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 IGHV3-30P01768 117 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 STATHP02808 62 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 ARMS2P0C7Q2 107 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 IGHV3-30-5P0DP03 117 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 ERHP84090 104 aaKnown RBP3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 FOXF2Q12947 444 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 EIF4EBP1Q13541 118 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 MRPL51Q4U2R6 128 aaKnown RBP3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 DGAT2L7PQ6IED9 249 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 Q6ZRU5 148 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 LINC00305Q7Z4B0 112 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 TDHQ8IZJ6 230 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 TMEM75Q8N9X5 138 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 FAM110DQ8TAY7 271 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 ITLN1Q8WWA0 313 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 FAM167A-AS1Q96KT0 104 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 DSCR8Q96T75 97 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 OVOL2Q9BRP0 275 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 UPK3BQ9BT76 320 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 BPTFQ12830 3046 aa3.69□□□□□ -1.82
HMGB1P19-201ENST00000517578 COL5A1P20908 1838 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 TRBV7-1A0A0A6YYK4 115 aa3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 TRAV3A0A0B4J244 114 aa3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 A0A0J9YY99 117 aa3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 TMEM30CPA0ZSE6 113 aa3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 C5orf63A6NC05 138 aa3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 RBMY1BA6NDE4 496 aaKnown RBP3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 RBMY1EA6NEQ0 496 aaKnown RBP3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 H0YIG0 161 aa3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 NDUFA3O95167 84 aa3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 RBMY1DP0C7P1 496 aaKnown RBP3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 RBMY1A1P0DJD3 496 aaKnown RBP3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 RBMY1CP0DJD4 496 aa3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 VPREB1P12018 145 aa3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 RBMY1FQ15415 496 aaKnown RBP3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 FAM222AQ5U5X8 452 aa3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 Q6JHZ5 121 aa3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 MDS2Q8NDY4 140 aa3.68□□□□□ -1.82
HMGB1P19-201ENST00000517578 SAP25Q8TEE9 199 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms