RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 SCTP09683 121 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ZNF32P17041 273 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 AZU1P20160 251 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 RAB13P51153 203 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 CMC4P56277 68 aaPredicted RBP2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 BSPH1Q075Z2 132 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 RPL22L1Q6P5R6 122 aaKnown RBP2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ZNF322Q6U7Q0 402 aaPredicted RBP2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 LINC00299Q6ZSB3 139 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 LINC01551Q86U37 167 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 GPHB5Q86YW7 130 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 H1FOOQ8IZA3 346 aaPredicted RBP2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TCTE3Q8IZS6 198 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ZNF433Q8N7K0 673 aaPredicted RBP2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 Q8N7P7 452 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 C15orf56Q8N910 161 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 Q8N976 141 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 SLC30A7Q8NEW0 376 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 OR51T1Q8NGJ9 327 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 OTOSQ8NHW6 89 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 SPTSSAQ969W0 71 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 Q96M85 177 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 SHANK2-AS3Q9BTD1 123 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 PRR34Q9NV39 138 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 C21orf62Q9NYP8 219 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 CKLFQ9UBR5 152 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TRAPPC2LQ9UL33 140 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 HIGD1AQ9Y241 93 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 RAI1Q7Z5J4 1906 aaPredicted RBP2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 NBEAL2Q6ZNJ1 2754 aa2.87□□□□□ -1.95
PDLIM1P4-201ENST00000504327 DSCAMO60469 2012 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ARFGEF3Q5TH69 2177 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 MEIKINA0A087WXM9 373 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 IGHV3-21A0A0B4J1V1 117 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 A6NDX4 124 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 LEUTXA8MZ59 168 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 OVOL1O14753 267 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 LYZL6O75951 148 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 OR2H2O95918 312 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 CD2P06729 351 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TLX1NBP0CAT3 122 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 PTHLHP12272 177 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 CRYGSP22914 178 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 HIST1H2BOP23527 126 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 SRIP30626 198 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 S100A11P31949 105 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 HIST1H2BBP33778 126 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 EVX1P49640 407 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 KLF3P57682 345 aaPredicted RBP2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 HIST1H2BDP58876 126 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 HIST1H2BCP62807 126 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 HIST2H2BEQ16778 126 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 RTL8BQ17RB0 113 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TMEM244Q5VVB8 128 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 FAM104BQ5XKR9 115 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 KTN1-AS1Q86SY8 53 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 Q8N9W7 124 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 HIST1H2BHQ93079 126 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 MUCL1Q96DR8 90 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 NARS2Q96I59 477 aaKnown RBP2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 MGLLQ99685 303 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 HIST1H2BNQ99877 126 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 HIST1H2BMQ99879 126 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 RERGLQ9H628 205 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 NDUFB11Q9NX14 153 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ZNRD1Q9P1U0 126 aa2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 NOP16Q9Y3C1 178 aaKnown RBP2.86□□□□□ -1.95
PDLIM1P4-201ENST00000504327 IGKV1D-43A0A0B4J1Z2 117 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 IGHV1-3A0A0C4DH29 117 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 IGKV1-12A0A0C4DH73 117 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 IGHV3-64DA0A0J9YX35 117 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TRDV1A0A1B0GX56 115 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 TMEM223A0PJW6 202 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 I3L521 148 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 J3QLW9 94 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 PDCD5O14737 125 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 RBFOX2O43251 390 aaKnown RBP eCLIP2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 IGKV1D-12P01611 117 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 UCHL1P09936 223 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 LINC00869P0C866 280 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 SMIM6P0DI80 62 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ZNF19P17023 458 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 CCL20P78556 96 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 HIST1H1AQ02539 215 aaPredicted RBP2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 NEDD8Q15843 81 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 C9orf129Q5T035 196 aaKnown RBP2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 NCMAPQ5T1S8 102 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 LINC01590Q5TEZ4 76 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 XAF1Q6GPH4 301 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 SLC25A34Q6PIV7 304 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 AMTNQ6UX39 209 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 HRCT1Q6UXD1 115 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 NTM-AS1Q6ZSK4 140 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 AMN1Q8IY45 258 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 OR5D14Q8NGL3 314 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 OR5AK2Q8NH90 309 aa2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 H1FXQ92522 213 aaKnown RBP2.85□□□□□ -1.95
PDLIM1P4-201ENST00000504327 ARL11Q969Q4 196 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms