RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 SGK494Q96LW2 274 aa11.16□□□□□ -0.62
CPNE1-228ENST00000498814 LINC00467Q9BRT7 94 aa11.16□□□□□ -0.62
CPNE1-228ENST00000498814 MANBALQ9NQG1 85 aa11.16□□□□□ -0.62
CPNE1-228ENST00000498814 PSG8Q9UQ74 426 aa11.16□□□□□ -0.62
CPNE1-228ENST00000498814 CXorf65A6NEN9 183 aa11.15□□□□□ -0.62
CPNE1-228ENST00000498814 HTN1P15515 57 aa11.15□□□□□ -0.62
CPNE1-228ENST00000498814 EMP1P54849 157 aa11.15□□□□□ -0.62
CPNE1-228ENST00000498814 NANOS2P60321 138 aaKnown RBP11.15□□□□□ -0.62
CPNE1-228ENST00000498814 PMS2P11Q13670 270 aa11.15□□□□□ -0.62
CPNE1-228ENST00000498814 Q6AWC8 147 aa11.15□□□□□ -0.62
CPNE1-228ENST00000498814 ZNF493Q6ZR52 646 aa11.15□□□□□ -0.62
CPNE1-228ENST00000498814 NDFIP1Q9BT67 221 aa11.15□□□□□ -0.62
CPNE1-228ENST00000498814 TREM1Q9NP99 234 aa11.15□□□□□ -0.62
CPNE1-228ENST00000498814 TEX48A0A1B0GUV7 120 aa11.14□□□□□ -0.63
CPNE1-228ENST00000498814 SPART-AS1P0CW21 52 aa11.14□□□□□ -0.63
CPNE1-228ENST00000498814 BLOC1S1P78537 153 aa11.14□□□□□ -0.63
CPNE1-228ENST00000498814 SAPCD1Q5SSQ6 148 aa11.14□□□□□ -0.63
CPNE1-228ENST00000498814 CASC10Q5T4H9 136 aa11.14□□□□□ -0.63
CPNE1-228ENST00000498814 PRNTQ86SH4 94 aa11.14□□□□□ -0.63
CPNE1-228ENST00000498814 RNASE8Q8TDE3 154 aaKnown RBP11.14□□□□□ -0.63
CPNE1-228ENST00000498814 TMEM263Q8WUH6 116 aaKnown RBP11.14□□□□□ -0.63
CPNE1-228ENST00000498814 C16orf74Q96GX8 76 aa11.14□□□□□ -0.63
CPNE1-228ENST00000498814 LINC00479Q96M42 142 aa11.14□□□□□ -0.63
CPNE1-228ENST00000498814 GNG13Q9P2W3 67 aa11.14□□□□□ -0.63
CPNE1-228ENST00000498814 DKK2Q9UBU2 259 aa11.14□□□□□ -0.63
CPNE1-228ENST00000498814 CELA1Q9UNI1 258 aa11.14□□□□□ -0.63
CPNE1-228ENST00000498814 KLF12Q9Y4X4 402 aa11.14□□□□□ -0.63
CPNE1-228ENST00000498814 TRAV34A0A0B4J273 112 aa11.13□□□□□ -0.63
CPNE1-228ENST00000498814 PLAC8L1A1L4L8 177 aa11.13□□□□□ -0.63
CPNE1-228ENST00000498814 C11orf94C9JXX5 98 aa11.13□□□□□ -0.63
CPNE1-228ENST00000498814 ZFAND6Q6FIF0 208 aa11.13□□□□□ -0.63
CPNE1-228ENST00000498814 Q6ZQT7 251 aa11.13□□□□□ -0.63
CPNE1-228ENST00000498814 TXNDC17Q9BRA2 123 aa11.13□□□□□ -0.63
CPNE1-228ENST00000498814 RGS13O14921 159 aa11.12□□□□□ -0.63
CPNE1-228ENST00000498814 C12orf74Q32Q52 190 aa11.12□□□□□ -0.63
CPNE1-228ENST00000498814 ANXA2RQ3ZCQ2 193 aa11.12□□□□□ -0.63
CPNE1-228ENST00000498814 FAM222AQ5U5X8 452 aa11.12□□□□□ -0.63
CPNE1-228ENST00000498814 EIF4E3Q8N5X7 224 aaKnown RBP11.12□□□□□ -0.63
CPNE1-228ENST00000498814 FMC1Q96HJ9 113 aa11.12□□□□□ -0.63
CPNE1-228ENST00000498814 TENM2Q9NT68 2774 aa11.12□□□□□ -0.63
CPNE1-228ENST00000498814 STARD9Q9P2P6 4700 aa11.11□□□□□ -0.63
CPNE1-228ENST00000498814 IGHV1OR15-1A0A075B7D0 117 aa11.11□□□□□ -0.63
CPNE1-228ENST00000498814 TRBV6-1A0A0K0K1D8 114 aa11.11□□□□□ -0.63
CPNE1-228ENST00000498814 LYRM9A8MSI8 78 aa11.11□□□□□ -0.63
CPNE1-228ENST00000498814 IFNA1P01562 189 aa11.11□□□□□ -0.63
CPNE1-228ENST00000498814 TMEM183BQ1AE95 376 aa11.11□□□□□ -0.63
CPNE1-228ENST00000498814 Q86TA4 180 aa11.11□□□□□ -0.63
CPNE1-228ENST00000498814 LYPD6BQ8NI32 183 aa11.11□□□□□ -0.63
CPNE1-228ENST00000498814 C8orf49Q96NF6 230 aa11.11□□□□□ -0.63
CPNE1-228ENST00000498814 TIMM8BQ9Y5J9 83 aaPredicted RBP11.11□□□□□ -0.63
CPNE1-228ENST00000498814 TRAV21A0A0B4J279 112 aa11.1□□□□□ -0.63
CPNE1-228ENST00000498814 NUPR2A6NF83 97 aa11.1□□□□□ -0.63
CPNE1-228ENST00000498814 CBY3A6NI87 242 aa11.1□□□□□ -0.63
CPNE1-228ENST00000498814 S100A9P06702 114 aaKnown RBP11.1□□□□□ -0.63
CPNE1-228ENST00000498814 TAGLN2P37802 199 aaKnown RBP11.1□□□□□ -0.63
CPNE1-228ENST00000498814 AKR1C3P42330 323 aa11.1□□□□□ -0.63
CPNE1-228ENST00000498814 UBE2G1P62253 170 aa11.1□□□□□ -0.63
CPNE1-228ENST00000498814 SMUG1Q53HV7 270 aa11.1□□□□□ -0.63
CPNE1-228ENST00000498814 ZNF680Q8NEM1 530 aa11.1□□□□□ -0.63
CPNE1-228ENST00000498814 C2CD4CQ8TF44 421 aa11.1□□□□□ -0.63
CPNE1-228ENST00000498814 PHLDA1Q8WV24 401 aaPredicted RBP11.1□□□□□ -0.63
CPNE1-228ENST00000498814 ZFP30Q9Y2G7 519 aa11.1□□□□□ -0.63
CPNE1-228ENST00000498814 SCO2A0A1W2PP80 73 aa11.09□□□□□ -0.63
CPNE1-228ENST00000498814 GCGP01275 180 aa11.09□□□□□ -0.63
CPNE1-228ENST00000498814 BCL2P10415 239 aa11.09□□□□□ -0.63
CPNE1-228ENST00000498814 ZNF80P51504 273 aaPredicted RBP11.09□□□□□ -0.63
CPNE1-228ENST00000498814 MEF2BQ02080 365 aaPredicted RBP11.09□□□□□ -0.63
CPNE1-228ENST00000498814 TDRG1Q3Y452 100 aa11.09□□□□□ -0.63
CPNE1-228ENST00000498814 CEMP1Q6PRD7 247 aaPredicted RBP11.09□□□□□ -0.63
CPNE1-228ENST00000498814 TEX261Q6UWH6 196 aa11.09□□□□□ -0.63
CPNE1-228ENST00000498814 Q6ZTC4 211 aa11.09□□□□□ -0.63
CPNE1-228ENST00000498814 COX8CQ7Z4L0 72 aa11.09□□□□□ -0.63
CPNE1-228ENST00000498814 C11orf52Q96A22 123 aa11.09□□□□□ -0.63
CPNE1-228ENST00000498814 SNURFLB1AK76 121 aa11.08□□□□□ -0.64
CPNE1-228ENST00000498814 LTAP01374 205 aa11.08□□□□□ -0.64
CPNE1-228ENST00000498814 PFN1P07737 140 aaKnown RBP11.08□□□□□ -0.64
CPNE1-228ENST00000498814 DAZ2Q13117 558 aaKnown RBP11.08□□□□□ -0.64
CPNE1-228ENST00000498814 MUC21Q5SSG8 566 aa11.08□□□□□ -0.64
CPNE1-228ENST00000498814 IBA57Q5T440 356 aaKnown RBP11.08□□□□□ -0.64
CPNE1-228ENST00000498814 FAM159AQ6UWV7 190 aa11.08□□□□□ -0.64
CPNE1-228ENST00000498814 ZNF767PQ75MW2 155 aa11.08□□□□□ -0.64
CPNE1-228ENST00000498814 C11orf72Q8NBR9 251 aa11.08□□□□□ -0.64
CPNE1-228ENST00000498814 NOP10Q9NPE3 64 aaKnown RBP11.08□□□□□ -0.64
CPNE1-228ENST00000498814 VAX2Q9UIW0 290 aa11.08□□□□□ -0.64
CPNE1-228ENST00000498814 TP53TG3Q9ULZ0 132 aa11.08□□□□□ -0.64
CPNE1-228ENST00000498814 TRAV10A0A0B4J240 114 aa11.07□□□□□ -0.64
CPNE1-228ENST00000498814 PDE6DO43924 150 aa11.07□□□□□ -0.64
CPNE1-228ENST00000498814 GSN-AS1Q9NRJ2 163 aa11.07□□□□□ -0.64
CPNE1-228ENST00000498814 KLK5Q9Y337 293 aaPredicted RBP11.07□□□□□ -0.64
CPNE1-228ENST00000498814 TCL1AP56279 114 aa11.06□□□□□ -0.64
CPNE1-228ENST00000498814 DAD1P61803 113 aa11.06□□□□□ -0.64
CPNE1-228ENST00000498814 KCNS1Q96KK3 526 aa11.06□□□□□ -0.64
CPNE1-228ENST00000498814 NAGKQ9UJ70 344 aa11.06□□□□□ -0.64
CPNE1-228ENST00000498814 TRGV11A0A075B6L2 103 aa11.05□□□□□ -0.64
CPNE1-228ENST00000498814 FABP5P3A8MUU1 101 aa11.05□□□□□ -0.64
CPNE1-228ENST00000498814 DEFB130BP0DP73 79 aa11.05□□□□□ -0.64
CPNE1-228ENST00000498814 DEFB130AP0DP74 79 aa11.05□□□□□ -0.64
CPNE1-228ENST00000498814 TMEM183AQ8IXX5 376 aa11.05□□□□□ -0.64
CPNE1-228ENST00000498814 LINC00612Q8N6U2 182 aa11.05□□□□□ -0.64
CPNE1-228ENST00000498814 ZC2HC1AQ96GY0 325 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms