RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 OR52I2Q8NH67 350 aa3.89□□□□□ -1.79
SPTA1-209ENST00000498708 MCFD2Q8NI22 146 aa3.89□□□□□ -1.79
SPTA1-209ENST00000498708 OCC1Q8TAD7 63 aa3.89□□□□□ -1.79
SPTA1-209ENST00000498708 THAP6Q8TBB0 222 aa3.89□□□□□ -1.79
SPTA1-209ENST00000498708 GPR146Q96CH1 333 aa3.89□□□□□ -1.79
SPTA1-209ENST00000498708 YIPF6Q96EC8 236 aa3.89□□□□□ -1.79
SPTA1-209ENST00000498708 MRAP2Q96G30 205 aa3.89□□□□□ -1.79
SPTA1-209ENST00000498708 C20orf144Q9BQM9 153 aa3.89□□□□□ -1.79
SPTA1-209ENST00000498708 NIPSNAP3BQ9BS92 247 aa3.89□□□□□ -1.79
SPTA1-209ENST00000498708 ATG101Q9BSB4 218 aa3.89□□□□□ -1.79
SPTA1-209ENST00000498708 CST9LQ9H4G1 147 aa3.89□□□□□ -1.79
SPTA1-209ENST00000498708 CACNG5Q9UF02 275 aa3.89□□□□□ -1.79
SPTA1-209ENST00000498708 TMED3Q9Y3Q3 217 aa3.89□□□□□ -1.79
SPTA1-209ENST00000498708 YTHDF2Q9Y5A9 579 aaKnown RBP3.89□□□□□ -1.79
SPTA1-209ENST00000498708 RFNGQ9Y644 331 aa3.89□□□□□ -1.79
SPTA1-209ENST00000498708 HLA-DRB4X5D2U9 266 aa3.89□□□□□ -1.79
SPTA1-209ENST00000498708 LOC102723971A0A1B0GUV8 181 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 GAGE10A6NGK3 116 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 ZNF705FA8MVS1 300 aaPredicted RBP3.88□□□□□ -1.79
SPTA1-209ENST00000498708 INS-IGF2F8WCM5 200 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 M0QXV9 152 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 SIVA1O15304 175 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 RS1O15537 224 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 BUB3O43684 328 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 PDE6DO43924 150 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 HBE1P02100 147 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 TYMSP04818 313 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 ZNF705DP0CH99 300 aaPredicted RBP3.88□□□□□ -1.79
SPTA1-209ENST00000498708 ZNF705BP0CI00 300 aaPredicted RBP3.88□□□□□ -1.79
SPTA1-209ENST00000498708 SMIM17P0DL12 118 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 PSG1P11464 419 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 SLC25A4P12235 298 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 NKX2-1P43699 371 aaPredicted RBP3.88□□□□□ -1.79
SPTA1-209ENST00000498708 SEC61GP60059 68 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 YPEL3P61236 119 aaPredicted RBP3.88□□□□□ -1.79
SPTA1-209ENST00000498708 LYZP61626 148 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 DAD1P61803 113 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 RPL32P62910 135 aaKnown RBP3.88□□□□□ -1.79
SPTA1-209ENST00000498708 BAXQ07812 192 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 C2orf83Q53S99 150 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 PDZD11Q5EBL8 140 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 TMEM268Q5VZI3 342 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 PRR27Q6MZM9 219 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 RNASEKQ6P5S7 137 aaKnown RBP3.88□□□□□ -1.79
SPTA1-209ENST00000498708 ZNF705AQ6ZN79 300 aaPredicted RBP3.88□□□□□ -1.79
SPTA1-209ENST00000498708 LHFPL1Q86WI0 220 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 C1orf158Q8N1D5 194 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 C6orf223Q8N319 242 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 TMEM170AQ8WVE7 144 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 C17orf77Q96MU5 243 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 MAP1LC3CQ9BXW4 147 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 SEC11CQ9BY50 192 aa3.88□□□□□ -1.79
SPTA1-209ENST00000498708 NAA50Q9GZZ1 169 aaKnown RBP3.88□□□□□ -1.79
SPTA1-209ENST00000498708 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.88□□□□□ -1.79
SPTA1-209ENST00000498708 C14orf166Q9Y224 244 aaKnown RBP3.88□□□□□ -1.79
SPTA1-209ENST00000498708 MUC2Q02817 5179 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 TMEM189A5PLL7 270 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 ZFP92A6NM28 416 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 ZNF705GA8MUZ8 300 aaPredicted RBP3.87□□□□□ -1.79
SPTA1-209ENST00000498708 CCL25O15444 150 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 GSTZ1O43708 216 aaPredicted RBP3.87□□□□□ -1.79
SPTA1-209ENST00000498708 MPC2O95563 127 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 SNRPCP09234 159 aaKnown RBP3.87□□□□□ -1.79
SPTA1-209ENST00000498708 DEFB130BP0DP73 79 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 DEFB130AP0DP74 79 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 CNN1P51911 297 aaKnown RBP3.87□□□□□ -1.79
SPTA1-209ENST00000498708 CKS1BP61024 79 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 PSG9Q00887 426 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 ZNF90Q03938 601 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 OR5I1Q13606 314 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 RRN3P1Q2M238 152 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 FAM78BQ5VT40 261 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 EBLN2Q6P2I7 272 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 RTBDNQ9BSG5 229 aaPredicted RBP3.87□□□□□ -1.79
SPTA1-209ENST00000498708 TMEM222Q9H0R3 208 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 C20orf85Q9H1P6 137 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 NAA60Q9H7X0 242 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 SLC25A22Q9H936 323 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 SPANXCQ9NY87 97 aa3.87□□□□□ -1.79
SPTA1-209ENST00000498708 TRAV12-2A0A075B6T6 113 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 C7orf66A4D0T2 115 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 SMIM9A6NGZ8 99 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 F5H768 121 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 M0R2Z0 102 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 PHOX2AO14813 284 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 CDS2O95674 445 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 SULT1A3P0DMM9 295 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 SULT1A4P0DMN0 295 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 IAPPP10997 89 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 HTN1P15515 57 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 TAS2R19P59542 299 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 HAMPP81172 84 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 KLF9Q13886 244 aaPredicted RBP3.86□□□□□ -1.79
SPTA1-209ENST00000498708 RHEBQ15382 184 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 SPINK13Q1W4C9 94 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 NMSQ5H8A3 153 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 C6orf226Q5I0X4 101 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 C1orf194Q5T5A4 169 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 FOXI2Q6ZQN5 318 aa3.86□□□□□ -1.79
SPTA1-209ENST00000498708 FAM219AQ8IW50 185 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms