RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 TEX29Q8N6K0 151 aa0.39□□□□□ -2.35
CD46-218ENST00000496723 MORN4Q8NDC4 146 aa0.39□□□□□ -2.35
CD46-218ENST00000496723 THEM6Q8WUY1 208 aa0.39□□□□□ -2.35
CD46-218ENST00000496723 MED31Q9Y3C7 131 aa0.39□□□□□ -2.35
CD46-218ENST00000496723 DSPPQ9NZW4 1301 aa0.38□□□□□ -2.35
CD46-218ENST00000496723 ESPL1Q14674 2120 aa0.38□□□□□ -2.35
CD46-218ENST00000496723 A2MP01023 1474 aa0.38□□□□□ -2.35
CD46-218ENST00000496723 LOC107984156A0A0G2JMH3 177 aa0.38□□□□□ -2.35
CD46-218ENST00000496723 A0A1W2PPB8 328 aa0.38□□□□□ -2.35
CD46-218ENST00000496723 A0A1W2PRS3 328 aa0.38□□□□□ -2.35
CD46-218ENST00000496723 PRORSD1PA6NEY8 169 aa0.38□□□□□ -2.35
CD46-218ENST00000496723 KIR3DP1A8MWS1 328 aa0.38□□□□□ -2.35
CD46-218ENST00000496723 FABP1P07148 127 aa0.38□□□□□ -2.35
CD46-218ENST00000496723 TFAMQ00059 246 aaKnown RBP0.38□□□□□ -2.35
CD46-218ENST00000496723 KRTAP21-1Q3LI58 79 aa0.38□□□□□ -2.35
CD46-218ENST00000496723 XAF1Q6GPH4 301 aa0.38□□□□□ -2.35
CD46-218ENST00000496723 C10orf99Q6UWK7 81 aa0.38□□□□□ -2.35
CD46-218ENST00000496723 ARL17AQ8IVW1 177 aa0.38□□□□□ -2.35
CD46-218ENST00000496723 TMEM229BQ8NBD8 167 aa0.38□□□□□ -2.35
CD46-218ENST00000496723 PLAC4Q8WY50 150 aa0.38□□□□□ -2.35
CD46-218ENST00000496723 MPC1Q9Y5U8 109 aa0.38□□□□□ -2.35
CD46-218ENST00000496723 SPAG17Q6Q759 2223 aa0.38□□□□□ -2.35
CD46-218ENST00000496723 HELZP42694 1942 aaKnown RBP0.38□□□□□ -2.35
CD46-218ENST00000496723 FAM135BQ49AJ0 1406 aa0.38□□□□□ -2.35
CD46-218ENST00000496723 MAP2P11137 1827 aaKnown RBP0.37□□□□□ -2.35
CD46-218ENST00000496723 LOC107984640A0A0U1RRK4 108 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 IFITM5A6NNB3 132 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 H3BMG7 143 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 EDF1O60869 148 aaKnown RBP0.37□□□□□ -2.35
CD46-218ENST00000496723 IFNA21P01568 189 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 CRYGSP22914 178 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 ETV6P41212 452 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 POLR2HP52434 150 aaKnown RBP0.37□□□□□ -2.35
CD46-218ENST00000496723 QRFPP83859 136 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 SPINK13Q1W4C9 94 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 SAMD13Q5VXD3 122 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 HRCT1Q6UXD1 115 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 TOMM20LQ6UXN7 152 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 OR8J3Q8NGG0 315 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 OR51A4Q8NGJ6 313 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 OR9Q1Q8NGQ5 310 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 NABP2Q9BQ15 211 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 C19orf12Q9NSK7 152 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 FKBP11Q9NYL4 201 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 MRPL35Q9NZE8 188 aaKnown RBP0.37□□□□□ -2.35
CD46-218ENST00000496723 SMPXQ9UHP9 88 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 RBBP6Q7Z6E9 1792 aaKnown RBP0.37□□□□□ -2.35
CD46-218ENST00000496723 DLEC1Q9Y238 1755 aa0.37□□□□□ -2.35
CD46-218ENST00000496723 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
CD46-218ENST00000496723 PGRMC1O00264 195 aaKnown RBP0.36□□□□□ -2.35
CD46-218ENST00000496723 PRH1P02810 166 aa0.36□□□□□ -2.35
CD46-218ENST00000496723 EVI2AP22794 236 aa0.36□□□□□ -2.35
CD46-218ENST00000496723 TSKUQ8WUA8 353 aa0.36□□□□□ -2.35
CD46-218ENST00000496723 SMIM7Q9BQ49 75 aa0.36□□□□□ -2.35
CD46-218ENST00000496723 TRAPPC2LQ9UL33 140 aa0.36□□□□□ -2.35
CD46-218ENST00000496723 RREB1Q92766 1687 aa0.36□□□□□ -2.35
CD46-218ENST00000496723 TNCP24821 2201 aa0.36□□□□□ -2.35
CD46-218ENST00000496723 TMEM30CPA0ZSE6 113 aa0.35□□□□□ -2.35
CD46-218ENST00000496723 IGF2P01344 180 aa0.35□□□□□ -2.35
CD46-218ENST00000496723 SLC25A4P12235 298 aa0.35□□□□□ -2.35
CD46-218ENST00000496723 S100GP29377 79 aa0.35□□□□□ -2.35
CD46-218ENST00000496723 GTF2A1P52655 376 aaPredicted RBP0.35□□□□□ -2.35
CD46-218ENST00000496723 BLCAPP62952 87 aa0.35□□□□□ -2.35
CD46-218ENST00000496723 CSAG1Q6PB30 78 aa0.35□□□□□ -2.35
CD46-218ENST00000496723 SMIM15Q7Z3B0 74 aa0.35□□□□□ -2.35
CD46-218ENST00000496723 OR5A2Q8NGI9 324 aa0.35□□□□□ -2.35
CD46-218ENST00000496723 SMR3AQ99954 134 aa0.35□□□□□ -2.35
CD46-218ENST00000496723 SELENOSQ9BQE4 189 aa0.35□□□□□ -2.35
CD46-218ENST00000496723 FAM103A1Q9BTL3 118 aaKnown RBP0.35□□□□□ -2.35
CD46-218ENST00000496723 CBLN4Q9NTU7 201 aa0.35□□□□□ -2.35
CD46-218ENST00000496723 ASH1LQ9NR48 2969 aaKnown RBP0.35□□□□□ -2.35
CD46-218ENST00000496723 PLXNA2O75051 1894 aa0.35□□□□□ -2.35
CD46-218ENST00000496723 CDK12Q9NYV4 1490 aaPredicted RBP0.35□□□□□ -2.35
CD46-218ENST00000496723 TMEM189A5PLL7 270 aa0.34□□□□□ -2.36
CD46-218ENST00000496723 HBDP02042 147 aa0.34□□□□□ -2.36
CD46-218ENST00000496723 RPL7P18124 248 aaKnown RBP0.34□□□□□ -2.36
CD46-218ENST00000496723 KDM5CP41229 1560 aa0.34□□□□□ -2.36
CD46-218ENST00000496723 TMEM128Q5BJH2 165 aa0.34□□□□□ -2.36
CD46-218ENST00000496723 GLYATL3Q5SZD4 288 aa0.34□□□□□ -2.36
CD46-218ENST00000496723 BRK1Q8WUW1 75 aa0.34□□□□□ -2.36
CD46-218ENST00000496723 NAT14Q8WUY8 206 aa0.34□□□□□ -2.36
CD46-218ENST00000496723 SKA2Q8WVK7 121 aaPredicted RBP0.34□□□□□ -2.36
CD46-218ENST00000496723 CCDC115Q96NT0 180 aa0.34□□□□□ -2.36
CD46-218ENST00000496723 DDA1Q9BW61 102 aa0.34□□□□□ -2.36
CD46-218ENST00000496723 MRPL36Q9P0J6 103 aaKnown RBP0.34□□□□□ -2.36
CD46-218ENST00000496723 KIDINS220Q9ULH0 1771 aa0.34□□□□□ -2.36
CD46-218ENST00000496723 WDR97A6NE52 1622 aa0.34□□□□□ -2.36
CD46-218ENST00000496723 APCP25054 2843 aa0.33□□□□□ -2.36
CD46-218ENST00000496723 ABCA1O95477 2261 aa0.33□□□□□ -2.36
CD46-218ENST00000496723 PNMA8CA0A1B0GUJ8 204 aa0.33□□□□□ -2.36
CD46-218ENST00000496723 HIGD1CA8MV81 97 aa0.33□□□□□ -2.36
CD46-218ENST00000496723 M0QZK8 103 aa0.33□□□□□ -2.36
CD46-218ENST00000496723 TPST1O60507 370 aa0.33□□□□□ -2.36
CD46-218ENST00000496723 LY6G6CO95867 125 aa0.33□□□□□ -2.36
CD46-218ENST00000496723 CKS2P33552 79 aa0.33□□□□□ -2.36
CD46-218ENST00000496723 RPL22P35268 128 aaKnown RBP0.33□□□□□ -2.36
CD46-218ENST00000496723 FXYD3Q14802 87 aa0.33□□□□□ -2.36
CD46-218ENST00000496723 IDO2Q6ZQW0 420 aa0.33□□□□□ -2.36
CD46-218ENST00000496723 TMEM35BQ8NCS4 154 aa0.33□□□□□ -2.36
CD46-218ENST00000496723 DMAC1Q96GE9 116 aa0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms