RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 IZUMO2Q6UXV1 221 aa8.66□□□□□ -1.02
EXOSC3-207ENST00000490516 SDIM1Q6ZPB5 146 aa8.66□□□□□ -1.02
EXOSC3-207ENST00000490516 EXOC3-AS1Q8N2X6 119 aa8.66□□□□□ -1.02
EXOSC3-207ENST00000490516 C9orf163Q8N9P6 203 aa8.66□□□□□ -1.02
EXOSC3-207ENST00000490516 Q8TAT8 98 aa8.66□□□□□ -1.02
EXOSC3-207ENST00000490516 UBE2WQ96B02 151 aa8.66□□□□□ -1.02
EXOSC3-207ENST00000490516 ZC2HC1AQ96GY0 325 aa8.66□□□□□ -1.02
EXOSC3-207ENST00000490516 NPVFQ9HCQ7 196 aa8.66□□□□□ -1.02
EXOSC3-207ENST00000490516 ZNF492Q9P255 531 aa8.66□□□□□ -1.02
EXOSC3-207ENST00000490516 TRGV11A0A075B6L2 103 aa8.65□□□□□ -1.02
EXOSC3-207ENST00000490516 TRBV19A0A075B6N1 114 aa8.65□□□□□ -1.02
EXOSC3-207ENST00000490516 ANKRD65E5RJM6 399 aa8.65□□□□□ -1.02
EXOSC3-207ENST00000490516 ZNF546Q86UE3 836 aa8.65□□□□□ -1.02
EXOSC3-207ENST00000490516 KIF25-AS1Q9Y6Z4 181 aa8.65□□□□□ -1.02
EXOSC3-207ENST00000490516 TRBV6-4A0A1B0GX49 114 aa8.64□□□□□ -1.03
EXOSC3-207ENST00000490516 PRSS1P07477 247 aa8.64□□□□□ -1.03
EXOSC3-207ENST00000490516 SLC25A6P12236 298 aa8.64□□□□□ -1.03
EXOSC3-207ENST00000490516 ANXA3P12429 323 aa8.64□□□□□ -1.03
EXOSC3-207ENST00000490516 C2orf50Q96LR7 162 aa8.64□□□□□ -1.03
EXOSC3-207ENST00000490516 SOSTQ9BQB4 213 aa8.64□□□□□ -1.03
EXOSC3-207ENST00000490516 EXTL2Q9UBQ6 330 aa8.64□□□□□ -1.03
EXOSC3-207ENST00000490516 PRELID1Q9Y255 219 aa8.64□□□□□ -1.03
EXOSC3-207ENST00000490516 DUXBA0A1W2PPF3 345 aa8.63□□□□□ -1.03
EXOSC3-207ENST00000490516 USP17L23D6RBM5 183 aa8.63□□□□□ -1.03
EXOSC3-207ENST00000490516 GNRH2O43555 120 aa8.63□□□□□ -1.03
EXOSC3-207ENST00000490516 HIST1H1EP10412 219 aaKnown RBP8.63□□□□□ -1.03
EXOSC3-207ENST00000490516 CIRBPQ14011 172 aaKnown RBP8.63□□□□□ -1.03
EXOSC3-207ENST00000490516 ATRAIDQ6UW56 229 aa8.63□□□□□ -1.03
EXOSC3-207ENST00000490516 FAM159AQ6UWV7 190 aa8.63□□□□□ -1.03
EXOSC3-207ENST00000490516 DPPA3Q6W0C5 159 aa8.63□□□□□ -1.03
EXOSC3-207ENST00000490516 NIT1Q86X76 327 aa8.63□□□□□ -1.03
EXOSC3-207ENST00000490516 PRRT1Q99946 306 aa8.63□□□□□ -1.03
EXOSC3-207ENST00000490516 OR51M1Q9H341 326 aa8.63□□□□□ -1.03
EXOSC3-207ENST00000490516 PSENENQ9NZ42 101 aa8.63□□□□□ -1.03
EXOSC3-207ENST00000490516 CCDC59Q9P031 241 aaKnown RBP8.63□□□□□ -1.03
EXOSC3-207ENST00000490516 NAGKQ9UJ70 344 aa8.63□□□□□ -1.03
EXOSC3-207ENST00000490516 A0A087WYN8 130 aa8.62□□□□□ -1.03
EXOSC3-207ENST00000490516 C5orf51A6NDU8 294 aa8.62□□□□□ -1.03
EXOSC3-207ENST00000490516 ZNF138P52744 262 aa8.62□□□□□ -1.03
EXOSC3-207ENST00000490516 POLR2GP62487 172 aaKnown RBP eCLIP8.62□□□□□ -1.03
EXOSC3-207ENST00000490516 ZNF266Q14584 549 aa8.62□□□□□ -1.03
EXOSC3-207ENST00000490516 CFAP126Q5VTH2 177 aa8.62□□□□□ -1.03
EXOSC3-207ENST00000490516 DGAT2L7PQ6IED9 249 aa8.62□□□□□ -1.03
EXOSC3-207ENST00000490516 CLVS1Q8IUQ0 354 aaPredicted RBP8.62□□□□□ -1.03
EXOSC3-207ENST00000490516 DPH3Q96FX2 82 aa8.62□□□□□ -1.03
EXOSC3-207ENST00000490516 MGST2Q99735 147 aa8.62□□□□□ -1.03
EXOSC3-207ENST00000490516 RABL2BQ9UNT1 228 aa8.62□□□□□ -1.03
EXOSC3-207ENST00000490516 TIMM9Q9Y5J7 89 aa8.62□□□□□ -1.03
EXOSC3-207ENST00000490516 URGCP-MRPS24S4R325 110 aa8.62□□□□□ -1.03
EXOSC3-207ENST00000490516 METTL15P1P0C7V9 234 aa8.61□□□□□ -1.03
EXOSC3-207ENST00000490516 AKAIN1P0CW23 69 aa8.61□□□□□ -1.03
EXOSC3-207ENST00000490516 RAB31Q13636 194 aa8.61□□□□□ -1.03
EXOSC3-207ENST00000490516 MGAT4CQ9UBM8 478 aa8.61□□□□□ -1.03
EXOSC3-207ENST00000490516 FSIP2Q5CZC0 6907 aa8.61□□□□□ -1.03
EXOSC3-207ENST00000490516 GAGE12JA6NER3 117 aa8.6□□□□□ -1.03
EXOSC3-207ENST00000490516 FNDC10F2Z333 226 aa8.6□□□□□ -1.03
EXOSC3-207ENST00000490516 CHTF8P0CG12 524 aa8.6□□□□□ -1.03
EXOSC3-207ENST00000490516 PYYP10082 97 aa8.6□□□□□ -1.03
EXOSC3-207ENST00000490516 GAGE1Q13065 139 aa8.6□□□□□ -1.03
EXOSC3-207ENST00000490516 GAGE4Q13068 117 aa8.6□□□□□ -1.03
EXOSC3-207ENST00000490516 GAGE5Q13069 117 aa8.6□□□□□ -1.03
EXOSC3-207ENST00000490516 GAGE13Q4V321 117 aa8.6□□□□□ -1.03
EXOSC3-207ENST00000490516 Q6AWC8 147 aa8.6□□□□□ -1.03
EXOSC3-207ENST00000490516 HOXB5P09067 269 aa8.59□□□□□ -1.03
EXOSC3-207ENST00000490516 SEC11BP0C7V7 166 aa8.59□□□□□ -1.03
EXOSC3-207ENST00000490516 LINC00694P0DN24 101 aa8.59□□□□□ -1.03
EXOSC3-207ENST00000490516 PRR3P79522 188 aaKnown RBP8.59□□□□□ -1.03
EXOSC3-207ENST00000490516 SSBP1Q04837 148 aaKnown RBP8.59□□□□□ -1.03
EXOSC3-207ENST00000490516 REG3GQ6UW15 175 aa8.59□□□□□ -1.03
EXOSC3-207ENST00000490516 C7orf33Q8WU49 177 aa8.59□□□□□ -1.03
EXOSC3-207ENST00000490516 SCGB3A2Q96PL1 93 aa8.59□□□□□ -1.03
EXOSC3-207ENST00000490516 C1orf43Q9BWL3 253 aa8.59□□□□□ -1.03
EXOSC3-207ENST00000490516 SH3BGRL3Q9H299 93 aa8.59□□□□□ -1.03
EXOSC3-207ENST00000490516 AAMDCQ9H7C9 122 aa8.59□□□□□ -1.03
EXOSC3-207ENST00000490516 Q9UF83 564 aa8.59□□□□□ -1.03
EXOSC3-207ENST00000490516 RAB26Q9ULW5 256 aa8.59□□□□□ -1.03
EXOSC3-207ENST00000490516 TRBV7-9A0A0J9YWB2 115 aa8.58□□□□□ -1.04
EXOSC3-207ENST00000490516 SSSCA1O60232 199 aa8.58□□□□□ -1.04
EXOSC3-207ENST00000490516 HLA-DQA1P01909 254 aa8.58□□□□□ -1.04
EXOSC3-207ENST00000490516 NCS1P62166 190 aa8.58□□□□□ -1.04
EXOSC3-207ENST00000490516 RPL19P84098 196 aaKnown RBP8.58□□□□□ -1.04
EXOSC3-207ENST00000490516 ARL16Q0P5N6 197 aa8.58□□□□□ -1.04
EXOSC3-207ENST00000490516 PDE6HQ13956 83 aa8.58□□□□□ -1.04
EXOSC3-207ENST00000490516 MIC13Q5XKP0 118 aa8.58□□□□□ -1.04
EXOSC3-207ENST00000490516 TMEM14EPQ6UXP3 125 aa8.58□□□□□ -1.04
EXOSC3-207ENST00000490516 CYB561D1Q8N8Q1 229 aa8.58□□□□□ -1.04
EXOSC3-207ENST00000490516 CRCT1Q9UGL9 99 aa8.58□□□□□ -1.04
EXOSC3-207ENST00000490516 A0A087WWC5 75 aa8.57□□□□□ -1.04
EXOSC3-207ENST00000490516 PIGBOS1A0A0B4J2F0 54 aa8.57□□□□□ -1.04
EXOSC3-207ENST00000490516 TYMSP04818 313 aa8.57□□□□□ -1.04
EXOSC3-207ENST00000490516 MGST1P10620 155 aaKnown RBP8.57□□□□□ -1.04
EXOSC3-207ENST00000490516 INPP1P49441 399 aa8.57□□□□□ -1.04
EXOSC3-207ENST00000490516 CAV2P51636 162 aa8.57□□□□□ -1.04
EXOSC3-207ENST00000490516 ID3Q02535 119 aa8.57□□□□□ -1.04
EXOSC3-207ENST00000490516 ZNF876PQ49A33 203 aa8.57□□□□□ -1.04
EXOSC3-207ENST00000490516 MZT2AQ6P582 158 aa8.57□□□□□ -1.04
EXOSC3-207ENST00000490516 Q6ZRG5 221 aa8.57□□□□□ -1.04
EXOSC3-207ENST00000490516 C15orf40Q8WUR7 153 aa8.57□□□□□ -1.04
EXOSC3-207ENST00000490516 VCX3BQ9H321 246 aa8.57□□□□□ -1.04
EXOSC3-207ENST00000490516 SCP2D1Q9UJQ7 156 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms