RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 IGFL3Q6UXB1 125 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 ZNF767PQ75MW2 155 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 TERB2Q8NHR7 220 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 HIST1H2BAQ96A08 127 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 NAA38Q9BRA0 125 aaKnown RBP1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 OR2J1Q9GZK6 312 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 TAF9BQ9HBM6 251 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 SPTBN1Q01082 2364 aaKnown RBP1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 NUP210LQ5VU65 1888 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 MAST4O15021 2626 aa1.94□□□□□ -2.1
DEPDC1-204ENST00000489862 ZGRF1Q86YA3 2104 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 POLQO75417 2590 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 ABCA12Q86UK0 2595 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 NCKAP5O14513 1909 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 CPAMD8Q8IZJ3 1885 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 ICE1Q9Y2F5 2266 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 DOPEY2Q9Y3R5 2298 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 LY6LH3BQJ8 138 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 TMEM256-PLSCR3K7ERE1 68 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 BET1O15155 118 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 GNG7O60262 68 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 SMIM24O75264 130 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 CDS2O95674 445 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 APOA2P02652 100 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 FREM3P0C091 2139 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 PTHLHP12272 177 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 CRHBPP24387 322 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 RTL8BQ17RB0 113 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 RRN3P1Q2M238 152 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 NOXRED1Q6NXP6 359 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 SLC48A1Q6P1K1 146 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 Q6ZS92 163 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 C2orf91Q6ZV80 131 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 PRR15Q8IV56 129 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 C10orf111Q8N326 155 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 NUP35Q8NFH5 326 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 OR4C16Q8NGL9 310 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 RTL8AQ9BWD3 113 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 TMEM126AQ9H061 195 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 ZNF443Q9Y2A4 671 aaPredicted RBP1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 DNAJC13O75165 2243 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 ESPL1Q14674 2120 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 MYO7BQ6PIF6 2116 aa1.93□□□□□ -2.1
DEPDC1-204ENST00000489862 CELSR1Q9NYQ6 3014 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 DIDO1Q9BTC0 2240 aaKnown RBP1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 NAV2Q8IVL1 2488 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 PRR14LQ5THK1 2151 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 LEUTXA8MZ59 168 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 H3BQ85 93 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 K7ERJ3 54 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 TXNDC9O14530 226 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 UBE2L6O14933 153 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 FAM107AO95990 144 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 BCL2P10415 239 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 RNASE4P34096 147 aaKnown RBP1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 SSR2P43308 183 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 PSG9Q00887 426 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 MEF2BQ02080 365 aaPredicted RBP1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 ZNF791Q3KP31 576 aaPredicted RBP1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 LYRM7Q5U5X0 104 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 SDIM1Q6ZPB5 146 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 RPS19BP1Q86WX3 136 aaKnown RBP1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 ZNF695Q8IW36 515 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 MSRB3Q8IXL7 192 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 CNEP1R1Q8N9A8 125 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 RMI2Q96E14 147 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 SLC25A21Q9BQT8 299 aaPredicted RBP1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 NIT2Q9NQR4 276 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 ASF1BQ9NVP2 202 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 MARCOQ9UEW3 520 aaPredicted RBP1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 MCTS1Q9ULC4 181 aaKnown RBP1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 CHCHD2Q9Y6H1 151 aaPredicted RBP1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 OTOGQ6ZRI0 2925 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 ZFHX3Q15911 3703 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 KIAA1549Q9HCM3 1950 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 ALPK2Q86TB3 2170 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 SVEP1Q4LDE5 3571 aa1.92□□□□□ -2.1
DEPDC1-204ENST00000489862 EXPH5Q8NEV8 1989 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 TRBV24-1A0A075B6N3 115 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 A0A096LPI6 279 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 TRAV38-1A0A0B4J264 116 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 GADD45GO95257 159 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 SLC25A16P16260 332 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 RBM11P57052 281 aaKnown RBP1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 RPL38P63173 70 aaKnown RBP1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 RHOGP84095 191 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 EMX2Q04743 252 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 FUT5Q11128 374 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 ZNF141Q15928 474 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 NNATQ16517 81 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 CLECL1Q8IZS7 167 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 RPRMLQ8N4K4 120 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 TEX29Q8N6K0 151 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 MORN4Q8NDC4 146 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 CANT1Q8WVQ1 401 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 WFDC6Q9BQY6 131 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 IMUPQ9GZP8 106 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 NAT8BQ9UHF3 227 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 TNFSF18Q9UNG2 199 aa1.91□□□□□ -2.1
DEPDC1-204ENST00000489862 LAMTOR2Q9Y2Q5 125 aa1.91□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms