RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 ASB16-AS1Q495Z4 193 aa1.79□□□□□ -2.12
SMARCA1-204ENST00000478420 LINC01545Q5VT33 79 aa1.79□□□□□ -2.12
SMARCA1-204ENST00000478420 GKN2Q86XP6 184 aa1.79□□□□□ -2.12
SMARCA1-204ENST00000478420 LINC00269Q8N2A0 174 aa1.79□□□□□ -2.12
SMARCA1-204ENST00000478420 LSM10Q969L4 123 aaKnown RBP1.79□□□□□ -2.12
SMARCA1-204ENST00000478420 NDUFB11Q9NX14 153 aa1.79□□□□□ -2.12
SMARCA1-204ENST00000478420 CCL26Q9Y258 94 aa1.79□□□□□ -2.12
SMARCA1-204ENST00000478420 IER3IP1Q9Y5U9 82 aa1.79□□□□□ -2.12
SMARCA1-204ENST00000478420 SMARCA4P51532 1647 aa1.79□□□□□ -2.12
SMARCA1-204ENST00000478420 CUL7Q14999 1698 aa1.79□□□□□ -2.12
SMARCA1-204ENST00000478420 QRICH2Q9H0J4 1663 aa1.79□□□□□ -2.12
SMARCA1-204ENST00000478420 CPAMD8Q8IZJ3 1885 aa1.79□□□□□ -2.12
SMARCA1-204ENST00000478420 DIDO1Q9BTC0 2240 aaKnown RBP1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 MYH7P12883 1935 aa1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 ATG2AQ2TAZ0 1938 aa1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 STRCQ7RTU9 1775 aa1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 CFTRP13569 1480 aa1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 IGHV1-24A0A0C4DH33 117 aa1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 PVALEFA0A1B0GWK0 134 aa1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 ZNF705FA8MVS1 300 aaPredicted RBP1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 ZNF736B4DX44 427 aaPredicted RBP1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 E7EUB6 86 aa1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 YPEL1O60688 119 aa1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 PROSCO94903 275 aa1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 ETV6P41212 452 aa1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 ATP11AUNQ6ZP68 121 aa1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 GTF2H5Q6ZYL4 71 aa1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 ARPINQ7Z6K5 226 aa1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 MUCL1Q96DR8 90 aa1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 Q96M85 177 aa1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 NAA60Q9H7X0 242 aa1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 RPRMQ9NS64 109 aa1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 ZFHX2Q9C0A1 2572 aaPredicted RBP1.78□□□□□ -2.12
SMARCA1-204ENST00000478420 CCDC88CQ9P219 2028 aa1.78□□□□□ -2.13
SMARCA1-204ENST00000478420 ANAPC1Q9H1A4 1944 aa1.78□□□□□ -2.13
SMARCA1-204ENST00000478420 A0A087WSZ3 146 aa1.77□□□□□ -2.13
SMARCA1-204ENST00000478420 LOC107984156A0A0G2JMH3 177 aa1.77□□□□□ -2.13
SMARCA1-204ENST00000478420 C3orf85A0A1B0GTC6 90 aa1.77□□□□□ -2.13
SMARCA1-204ENST00000478420 GEMIN2O14893 280 aaKnown RBP1.77□□□□□ -2.13
SMARCA1-204ENST00000478420 HYPMO75409 117 aa1.77□□□□□ -2.13
SMARCA1-204ENST00000478420 TPRXLQ17RH7 258 aa1.77□□□□□ -2.13
SMARCA1-204ENST00000478420 ARL17AQ8IVW1 177 aa1.77□□□□□ -2.13
SMARCA1-204ENST00000478420 ATP6V0E2Q8NHE4 81 aa1.77□□□□□ -2.13
SMARCA1-204ENST00000478420 Q8TAT8 98 aa1.77□□□□□ -2.13
SMARCA1-204ENST00000478420 CMTM2Q8TAZ6 248 aa1.77□□□□□ -2.13
SMARCA1-204ENST00000478420 SNHG12Q9BXW3 62 aa1.77□□□□□ -2.13
SMARCA1-204ENST00000478420 CHCHD2Q9Y6H1 151 aaPredicted RBP1.77□□□□□ -2.13
SMARCA1-204ENST00000478420 SERP1Q9Y6X1 66 aa1.77□□□□□ -2.13
SMARCA1-204ENST00000478420 GLI3P10071 1580 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 ARHGAP32A7KAX9 2087 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 RAPGEF2Q9Y4G8 1499 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 MYH9P35579 1960 aaKnown RBP1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 ZSWIM8A7E2V4 1837 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 TRAV12-1A0A0B4J245 112 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 C2orf70A6NJV1 201 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 MCRIP1C9JLW8 97 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 E7EQL1 145 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 EDF1O60869 148 aaKnown RBP1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 MPC2O95563 127 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 Q56UQ5 140 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 Q6AWC8 147 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 KRTAP5-7Q6L8G8 165 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 HCP5Q6MZN7 132 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 MRPL54Q6P161 138 aaKnown RBP1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 ZCCHC23Q6ZST2 131 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 Q6ZTI0 123 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 FP248Q71RG6 208 aaPredicted RBP1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 TMEM254Q8TBM7 123 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 COPS9Q8WXC6 57 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 TAS2R8Q9NYW2 309 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 NOP16Q9Y3C1 178 aaKnown RBP1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 USP54Q70EL1 1684 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 TTC37Q6PGP7 1564 aa1.76□□□□□ -2.13
SMARCA1-204ENST00000478420 KIF13AQ9H1H9 1805 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 MYO9BQ13459 2157 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 KIAA2026Q5HYC2 2103 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 TRAV10A0A0B4J240 114 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 A0A0G2JQZ4 141 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 TCRBV4S1A1TA0A5B7 111 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 OOSP1A8MZH6 123 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 J3QLW9 94 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 SPINK8P0C7L1 97 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 KRTAP12-3P60328 96 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 S100A10P60903 97 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 RPL26P61254 145 aaKnown RBP1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 C9orf153Q5TBE3 101 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 CASC2Q6XLA1 102 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 Q6ZS92 163 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 C5orf17Q8NAS9 161 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 PLPP5Q8NEB5 264 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 VSTM2AQ8TAG5 236 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 SFT2D1Q8WV19 159 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 ZCCHC13Q8WW36 166 aaKnown RBP1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 LINC00526Q96FQ7 95 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 TIMM21Q9BVV7 248 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 PTPRBP23467 1997 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 RB1CC1Q8TDY2 1594 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 PLXNA3P51805 1871 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 MYO16Q9Y6X6 1858 aa1.75□□□□□ -2.13
SMARCA1-204ENST00000478420 KTN1Q86UP2 1357 aaKnown RBP1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms