RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 BAXQ07812 192 aa7.97□□□□□ -1.13
HDAC6-219ENST00000476625 Q6ZRG5 221 aa7.97□□□□□ -1.13
HDAC6-219ENST00000476625 SRRQ9GZT4 340 aa7.97□□□□□ -1.13
HDAC6-219ENST00000476625 ZNF492Q9P255 531 aa7.97□□□□□ -1.13
HDAC6-219ENST00000476625 RNF24Q9Y225 148 aa7.97□□□□□ -1.13
HDAC6-219ENST00000476625 FAT3Q8TDW7 4589 aa7.97□□□□□ -1.13
HDAC6-219ENST00000476625 KRTAP29-1A8MX34 341 aaPredicted RBP7.96□□□□□ -1.14
HDAC6-219ENST00000476625 L7N2F9 121 aa7.96□□□□□ -1.14
HDAC6-219ENST00000476625 ZNF253O75346 499 aa7.96□□□□□ -1.14
HDAC6-219ENST00000476625 EIF3GO75821 320 aaKnown RBP eCLIP7.96□□□□□ -1.14
HDAC6-219ENST00000476625 HIST1H1EP10412 219 aaKnown RBP7.96□□□□□ -1.14
HDAC6-219ENST00000476625 CAV2P51636 162 aa7.96□□□□□ -1.14
HDAC6-219ENST00000476625 VAMP2P63027 116 aa7.96□□□□□ -1.14
HDAC6-219ENST00000476625 TMEM183BQ1AE95 376 aa7.96□□□□□ -1.14
HDAC6-219ENST00000476625 MIR17HGQ75NE6 70 aa7.96□□□□□ -1.14
HDAC6-219ENST00000476625 TMEM183AQ8IXX5 376 aa7.96□□□□□ -1.14
HDAC6-219ENST00000476625 OR1L4Q8NGR5 311 aa7.96□□□□□ -1.14
HDAC6-219ENST00000476625 PCNPQ8WW12 178 aaKnown RBP7.96□□□□□ -1.14
HDAC6-219ENST00000476625 PHYHIPLQ96FC7 376 aa7.96□□□□□ -1.14
HDAC6-219ENST00000476625 GGACTQ9BVM4 153 aa7.96□□□□□ -1.14
HDAC6-219ENST00000476625 FAM25EA8MYX2 175 aa7.95□□□□□ -1.14
HDAC6-219ENST00000476625 OR10J4P0C629 311 aa7.95□□□□□ -1.14
HDAC6-219ENST00000476625 FGF7P21781 194 aa7.95□□□□□ -1.14
HDAC6-219ENST00000476625 INPP1P49441 399 aa7.95□□□□□ -1.14
HDAC6-219ENST00000476625 CNPY1Q3B7I2 92 aa7.95□□□□□ -1.14
HDAC6-219ENST00000476625 TMEM78Q5T7P6 136 aa7.95□□□□□ -1.14
HDAC6-219ENST00000476625 OR10G4Q8NGN3 311 aa7.95□□□□□ -1.14
HDAC6-219ENST00000476625 FAM167A-AS1Q96KT0 104 aa7.95□□□□□ -1.14
HDAC6-219ENST00000476625 PFDN5Q99471 154 aa7.95□□□□□ -1.14
HDAC6-219ENST00000476625 SDHCQ99643 169 aaPredicted RBP7.95□□□□□ -1.14
HDAC6-219ENST00000476625 SLC25A31Q9H0C2 315 aa7.95□□□□□ -1.14
HDAC6-219ENST00000476625 UQCC1Q9NVA1 299 aa7.95□□□□□ -1.14
HDAC6-219ENST00000476625 TMEM14CQ9P0S9 112 aa7.95□□□□□ -1.14
HDAC6-219ENST00000476625 PKHD1L1Q86WI1 4243 aa7.95□□□□□ -1.14
HDAC6-219ENST00000476625 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.94□□□□□ -1.14
HDAC6-219ENST00000476625 CENPXA8MT69 81 aa7.94□□□□□ -1.14
HDAC6-219ENST00000476625 GNRH2O43555 120 aa7.94□□□□□ -1.14
HDAC6-219ENST00000476625 RPL29P47914 159 aaKnown RBP7.94□□□□□ -1.14
HDAC6-219ENST00000476625 KRTAP10-4P60372 401 aaPredicted RBP7.94□□□□□ -1.14
HDAC6-219ENST00000476625 VWC2Q2TAL6 325 aa7.94□□□□□ -1.14
HDAC6-219ENST00000476625 NHLRC2Q8NBF2 726 aa7.94□□□□□ -1.14
HDAC6-219ENST00000476625 MITD1Q8WV92 249 aa7.94□□□□□ -1.14
HDAC6-219ENST00000476625 SEC22CQ9BRL7 303 aa7.94□□□□□ -1.14
HDAC6-219ENST00000476625 NAGKQ9UJ70 344 aa7.94□□□□□ -1.14
HDAC6-219ENST00000476625 PRELID1Q9Y255 219 aa7.94□□□□□ -1.14
HDAC6-219ENST00000476625 IGHV3-38A0A0C4DH36 116 aa7.93□□□□□ -1.14
HDAC6-219ENST00000476625 NAP1L6A6NFF2 107 aa7.93□□□□□ -1.14
HDAC6-219ENST00000476625 IBA57-AS1B1ANH7 110 aa7.93□□□□□ -1.14
HDAC6-219ENST00000476625 PPT1P50897 306 aa7.93□□□□□ -1.14
HDAC6-219ENST00000476625 ZNF138P52744 262 aa7.93□□□□□ -1.14
HDAC6-219ENST00000476625 SLAQ13239 276 aa7.93□□□□□ -1.14
HDAC6-219ENST00000476625 TRIQKQ629K1 86 aa7.93□□□□□ -1.14
HDAC6-219ENST00000476625 IQCF2Q8IXL9 164 aa7.93□□□□□ -1.14
HDAC6-219ENST00000476625 THAP6Q8TBB0 222 aa7.93□□□□□ -1.14
HDAC6-219ENST00000476625 NTN5Q8WTR8 489 aaPredicted RBP7.93□□□□□ -1.14
HDAC6-219ENST00000476625 CCDC32Q9BV29 185 aa7.93□□□□□ -1.14
HDAC6-219ENST00000476625 AAMDCQ9H7C9 122 aa7.93□□□□□ -1.14
HDAC6-219ENST00000476625 IGHV3-73A0A0B4J1V6 119 aa7.92□□□□□ -1.14
HDAC6-219ENST00000476625 S100A10P60903 97 aa7.92□□□□□ -1.14
HDAC6-219ENST00000476625 RAB31Q13636 194 aa7.92□□□□□ -1.14
HDAC6-219ENST00000476625 Q6ZSA8 131 aa7.92□□□□□ -1.14
HDAC6-219ENST00000476625 SCXQ7RTU7 201 aa7.92□□□□□ -1.14
HDAC6-219ENST00000476625 RASL10AQ92737 203 aa7.92□□□□□ -1.14
HDAC6-219ENST00000476625 FXYD5Q96DB9 178 aa7.92□□□□□ -1.14
HDAC6-219ENST00000476625 DNAJC30Q96LL9 226 aa7.92□□□□□ -1.14
HDAC6-219ENST00000476625 GPN1Q9HCN4 374 aaPredicted RBP7.92□□□□□ -1.14
HDAC6-219ENST00000476625 TRAV4A0A0B4J268 109 aa7.91□□□□□ -1.14
HDAC6-219ENST00000476625 C9JCJ5 164 aa7.91□□□□□ -1.14
HDAC6-219ENST00000476625 F6UZH7 168 aa7.91□□□□□ -1.14
HDAC6-219ENST00000476625 ORM1P02763 201 aa7.91□□□□□ -1.14
HDAC6-219ENST00000476625 PLA2G1BP04054 148 aaKnown RBP7.91□□□□□ -1.14
HDAC6-219ENST00000476625 RAB32Q13637 225 aa7.91□□□□□ -1.14
HDAC6-219ENST00000476625 PDE6HQ13956 83 aa7.91□□□□□ -1.14
HDAC6-219ENST00000476625 ZNF266Q14584 549 aa7.91□□□□□ -1.14
HDAC6-219ENST00000476625 ZNF846Q147U1 533 aa7.91□□□□□ -1.14
HDAC6-219ENST00000476625 LINC01556Q5JQF7 62 aa7.91□□□□□ -1.14
HDAC6-219ENST00000476625 OR10J3Q5JRS4 329 aa7.91□□□□□ -1.14
HDAC6-219ENST00000476625 C10orf126Q8N4M7 172 aa7.91□□□□□ -1.14
HDAC6-219ENST00000476625 TMEM252Q8N6L7 170 aa7.91□□□□□ -1.14
HDAC6-219ENST00000476625 OR4C5Q8NGB2 326 aa7.91□□□□□ -1.14
HDAC6-219ENST00000476625 TXNDC17Q9BRA2 123 aa7.91□□□□□ -1.14
HDAC6-219ENST00000476625 NPCDR1Q9BY65 106 aa7.91□□□□□ -1.14
HDAC6-219ENST00000476625 RPH3ALQ9UNE2 315 aa7.91□□□□□ -1.14
HDAC6-219ENST00000476625 TRAV6A0A075B6T7 132 aa7.9□□□□□ -1.14
HDAC6-219ENST00000476625 C5orf51A6NDU8 294 aa7.9□□□□□ -1.14
HDAC6-219ENST00000476625 TYMSP04818 313 aa7.9□□□□□ -1.14
HDAC6-219ENST00000476625 NMBP08949 121 aa7.9□□□□□ -1.14
HDAC6-219ENST00000476625 NBEAP1P0C6P0 100 aa7.9□□□□□ -1.14
HDAC6-219ENST00000476625 SULT1A1P50225 295 aa7.9□□□□□ -1.14
HDAC6-219ENST00000476625 RANP62826 216 aaKnown RBP7.9□□□□□ -1.14
HDAC6-219ENST00000476625 DPPA3Q6W0C5 159 aa7.9□□□□□ -1.14
HDAC6-219ENST00000476625 C12orf45Q8N5I9 185 aaPredicted RBP7.9□□□□□ -1.14
HDAC6-219ENST00000476625 C20orf85Q9H1P6 137 aa7.9□□□□□ -1.14
HDAC6-219ENST00000476625 OR51M1Q9H341 326 aa7.9□□□□□ -1.14
HDAC6-219ENST00000476625 GATA1P15976 413 aaPredicted RBP7.89□□□□□ -1.15
HDAC6-219ENST00000476625 NHLH2Q02577 135 aa7.89□□□□□ -1.15
HDAC6-219ENST00000476625 Q6AWC8 147 aa7.89□□□□□ -1.15
HDAC6-219ENST00000476625 FAM159AQ6UWV7 190 aa7.89□□□□□ -1.15
HDAC6-219ENST00000476625 SLC25A29Q8N8R3 303 aa7.89□□□□□ -1.15
HDAC6-219ENST00000476625 DEFB104AQ8WTQ1 72 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms