RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SPART-AS1P0CW21 52 aa8.92□□□□□ -0.98
DDX56-209ENST00000473924 AZU1P20160 251 aa8.92□□□□□ -0.98
DDX56-209ENST00000473924 ATP5G3P48201 142 aa8.92□□□□□ -0.98
DDX56-209ENST00000473924 PRR9Q5T870 116 aa8.92□□□□□ -0.98
DDX56-209ENST00000473924 PRNTQ86SH4 94 aa8.92□□□□□ -0.98
DDX56-209ENST00000473924 TMEM75Q8N9X5 138 aa8.92□□□□□ -0.98
DDX56-209ENST00000473924 C16orf74Q96GX8 76 aa8.92□□□□□ -0.98
DDX56-209ENST00000473924 MANBALQ9NQG1 85 aa8.92□□□□□ -0.98
DDX56-209ENST00000473924 GNG13Q9P2W3 67 aa8.92□□□□□ -0.98
DDX56-209ENST00000473924 TEX48A0A1B0GUV7 120 aa8.91□□□□□ -0.98
DDX56-209ENST00000473924 ZNF324O75467 553 aaPredicted RBP8.91□□□□□ -0.98
DDX56-209ENST00000473924 UBE2G1P62253 170 aa8.91□□□□□ -0.98
DDX56-209ENST00000473924 CCL20P78556 96 aa8.91□□□□□ -0.98
DDX56-209ENST00000473924 CASC10Q5T4H9 136 aa8.91□□□□□ -0.98
DDX56-209ENST00000473924 ZNF493Q6ZR52 646 aa8.91□□□□□ -0.98
DDX56-209ENST00000473924 TMEM263Q8WUH6 116 aaKnown RBP8.91□□□□□ -0.98
DDX56-209ENST00000473924 LINC00479Q96M42 142 aa8.91□□□□□ -0.98
DDX56-209ENST00000473924 TCEAL7Q9BRU2 100 aa8.91□□□□□ -0.98
DDX56-209ENST00000473924 CELA1Q9UNI1 258 aa8.91□□□□□ -0.98
DDX56-209ENST00000473924 TRAV34A0A0B4J273 112 aa8.9□□□□□ -0.98
DDX56-209ENST00000473924 CBY3A6NI87 242 aa8.9□□□□□ -0.98
DDX56-209ENST00000473924 C11orf94C9JXX5 98 aa8.9□□□□□ -0.98
DDX56-209ENST00000473924 IFNA1P01562 189 aa8.9□□□□□ -0.98
DDX56-209ENST00000473924 IGLV2-11P01706 119 aa8.9□□□□□ -0.98
DDX56-209ENST00000473924 BLOC1S1P78537 153 aa8.9□□□□□ -0.98
DDX56-209ENST00000473924 SAPCD1Q5SSQ6 148 aa8.9□□□□□ -0.98
DDX56-209ENST00000473924 FAM222AQ5U5X8 452 aa8.9□□□□□ -0.98
DDX56-209ENST00000473924 EIF4E3Q8N5X7 224 aaKnown RBP8.9□□□□□ -0.98
DDX56-209ENST00000473924 TVP23CQ96ET8 276 aa8.9□□□□□ -0.98
DDX56-209ENST00000473924 DKK2Q9UBU2 259 aa8.9□□□□□ -0.98
DDX56-209ENST00000473924 IGHV1OR15-1A0A075B7D0 117 aa8.89□□□□□ -0.99
DDX56-209ENST00000473924 NUPR2A6NF83 97 aa8.89□□□□□ -0.99
DDX56-209ENST00000473924 SNURFLB1AK76 121 aa8.89□□□□□ -0.99
DDX56-209ENST00000473924 AKR1C3P42330 323 aa8.89□□□□□ -0.99
DDX56-209ENST00000473924 Q6AWC8 147 aa8.89□□□□□ -0.99
DDX56-209ENST00000473924 Q6ZQT7 251 aa8.89□□□□□ -0.99
DDX56-209ENST00000473924 ZNF767PQ75MW2 155 aa8.89□□□□□ -0.99
DDX56-209ENST00000473924 RNASE8Q8TDE3 154 aaKnown RBP8.89□□□□□ -0.99
DDX56-209ENST00000473924 PHLDA1Q8WV24 401 aaPredicted RBP8.89□□□□□ -0.99
DDX56-209ENST00000473924 FMC1Q96HJ9 113 aa8.89□□□□□ -0.99
DDX56-209ENST00000473924 C8orf49Q96NF6 230 aa8.89□□□□□ -0.99
DDX56-209ENST00000473924 TIMM8BQ9Y5J9 83 aaPredicted RBP8.89□□□□□ -0.99
DDX56-209ENST00000473924 TRAV21A0A0B4J279 112 aa8.88□□□□□ -0.99
DDX56-209ENST00000473924 LYRM9A8MSI8 78 aa8.88□□□□□ -0.99
DDX56-209ENST00000473924 DAD1P61803 113 aa8.88□□□□□ -0.99
DDX56-209ENST00000473924 C12orf74Q32Q52 190 aa8.88□□□□□ -0.99
DDX56-209ENST00000473924 SMUG1Q53HV7 270 aa8.88□□□□□ -0.99
DDX56-209ENST00000473924 MUC21Q5SSG8 566 aa8.88□□□□□ -0.99
DDX56-209ENST00000473924 FAM159AQ6UWV7 190 aa8.88□□□□□ -0.99
DDX56-209ENST00000473924 Q6ZTC4 211 aa8.88□□□□□ -0.99
DDX56-209ENST00000473924 ZNF680Q8NEM1 530 aa8.88□□□□□ -0.99
DDX56-209ENST00000473924 LINC00467Q9BRT7 94 aa8.88□□□□□ -0.99
DDX56-209ENST00000473924 NAGKQ9UJ70 344 aa8.88□□□□□ -0.99
DDX56-209ENST00000473924 TRAV10A0A0B4J240 114 aa8.87□□□□□ -0.99
DDX56-209ENST00000473924 SCO2A0A1W2PP80 73 aa8.87□□□□□ -0.99
DDX56-209ENST00000473924 PLAC8L1A1L4L8 177 aa8.87□□□□□ -0.99
DDX56-209ENST00000473924 GCGP01275 180 aa8.87□□□□□ -0.99
DDX56-209ENST00000473924 ANXA2RQ3ZCQ2 193 aa8.87□□□□□ -0.99
DDX56-209ENST00000473924 CEMP1Q6PRD7 247 aaPredicted RBP8.87□□□□□ -0.99
DDX56-209ENST00000473924 Q86TA4 180 aa8.87□□□□□ -0.99
DDX56-209ENST00000473924 TXNDC17Q9BRA2 123 aa8.87□□□□□ -0.99
DDX56-209ENST00000473924 NOP10Q9NPE3 64 aaKnown RBP8.87□□□□□ -0.99
DDX56-209ENST00000473924 KLK5Q9Y337 293 aaPredicted RBP8.87□□□□□ -0.99
DDX56-209ENST00000473924 S100A9P06702 114 aaKnown RBP8.86□□□□□ -0.99
DDX56-209ENST00000473924 DEFB130BP0DP73 79 aa8.86□□□□□ -0.99
DDX56-209ENST00000473924 DEFB130AP0DP74 79 aa8.86□□□□□ -0.99
DDX56-209ENST00000473924 TAGLN2P37802 199 aaKnown RBP8.86□□□□□ -0.99
DDX56-209ENST00000473924 MEF2BQ02080 365 aaPredicted RBP8.86□□□□□ -0.99
DDX56-209ENST00000473924 TMEM183BQ1AE95 376 aa8.86□□□□□ -0.99
DDX56-209ENST00000473924 GSN-AS1Q9NRJ2 163 aa8.86□□□□□ -0.99
DDX56-209ENST00000473924 TP53TG3Q9ULZ0 132 aa8.86□□□□□ -0.99
DDX56-209ENST00000473924 ZFP30Q9Y2G7 519 aa8.86□□□□□ -0.99
DDX56-209ENST00000473924 KLF12Q9Y4X4 402 aa8.86□□□□□ -0.99
DDX56-209ENST00000473924 TRGV11A0A075B6L2 103 aa8.85□□□□□ -0.99
DDX56-209ENST00000473924 PFN1P07737 140 aaKnown RBP8.85□□□□□ -0.99
DDX56-209ENST00000473924 BCL2P10415 239 aa8.85□□□□□ -0.99
DDX56-209ENST00000473924 ZNF80P51504 273 aaPredicted RBP8.85□□□□□ -0.99
DDX56-209ENST00000473924 ZNF415Q09FC8 603 aa8.85□□□□□ -0.99
DDX56-209ENST00000473924 IBA57Q5T440 356 aaKnown RBP8.85□□□□□ -0.99
DDX56-209ENST00000473924 TEX261Q6UWH6 196 aa8.85□□□□□ -0.99
DDX56-209ENST00000473924 TMEM183AQ8IXX5 376 aa8.85□□□□□ -0.99
DDX56-209ENST00000473924 C2CD4CQ8TF44 421 aa8.85□□□□□ -0.99
DDX56-209ENST00000473924 VAX2Q9UIW0 290 aa8.85□□□□□ -0.99
DDX56-209ENST00000473924 DEFB131BA0A096LNP1 70 aa8.84□□□□□ -0.99
DDX56-209ENST00000473924 TRBV6-1A0A0K0K1D8 114 aa8.84□□□□□ -0.99
DDX56-209ENST00000473924 PDE6DO43924 150 aa8.84□□□□□ -0.99
DDX56-209ENST00000473924 HTN3P15516 51 aa8.84□□□□□ -0.99
DDX56-209ENST00000473924 C11orf72Q8NBR9 251 aa8.84□□□□□ -0.99
DDX56-209ENST00000473924 KCNS1Q96KK3 526 aa8.84□□□□□ -0.99
DDX56-209ENST00000473924 SDF2L1Q9HCN8 221 aa8.84□□□□□ -0.99
DDX56-209ENST00000473924 GAGE12BA1L429 117 aa8.83□□□□□ -1
DDX56-209ENST00000473924 FABP5P3A8MUU1 101 aa8.83□□□□□ -1
DDX56-209ENST00000473924 GAGE7O76087 117 aa8.83□□□□□ -1
DDX56-209ENST00000473924 LTAP01374 205 aa8.83□□□□□ -1
DDX56-209ENST00000473924 GAGE12FP0CL80 117 aa8.83□□□□□ -1
DDX56-209ENST00000473924 GAGE12GP0CL81 117 aa8.83□□□□□ -1
DDX56-209ENST00000473924 GAGE12IP0CL82 117 aa8.83□□□□□ -1
DDX56-209ENST00000473924 TCL1AP56279 114 aa8.83□□□□□ -1
DDX56-209ENST00000473924 DAZ2Q13117 558 aaKnown RBP8.83□□□□□ -1
DDX56-209ENST00000473924 TDRG1Q3Y452 100 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms