RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 PCOTHQ58A44 107 aa1.83□□□□□ -2.12
VPS13A-210ENST00000471439 FAM78BQ5VT40 261 aa1.83□□□□□ -2.12
VPS13A-210ENST00000471439 THOC7Q6I9Y2 204 aaKnown RBP1.83□□□□□ -2.12
VPS13A-210ENST00000471439 Q6ZTI0 123 aa1.83□□□□□ -2.12
VPS13A-210ENST00000471439 TMEM144Q7Z5S9 345 aa1.83□□□□□ -2.12
VPS13A-210ENST00000471439 ZFAND1Q8TCF1 268 aa1.83□□□□□ -2.12
VPS13A-210ENST00000471439 MRPL48Q96GC5 212 aaKnown RBP1.83□□□□□ -2.12
VPS13A-210ENST00000471439 ZNF492Q9P255 531 aa1.83□□□□□ -2.12
VPS13A-210ENST00000471439 CD300AQ9UGN4 299 aa1.83□□□□□ -2.12
VPS13A-210ENST00000471439 V9GYS6 101 aa1.83□□□□□ -2.12
VPS13A-210ENST00000471439 V9GYY9 64 aa1.83□□□□□ -2.12
VPS13A-210ENST00000471439 IGHV3-64A0A075B6Q5 118 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 M0QX08 132 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 M0R2Z0 102 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 AIPO00170 330 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 YPEL1O60688 119 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 APOA2P02652 100 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 IGKV4-1P06312 121 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 ETV6P41212 452 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 MT4P47944 62 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 PSMB2P49721 201 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 RBP2P50120 134 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 TAS2R60P59551 318 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 FLI1Q01543 452 aaPredicted RBP1.82□□□□□ -2.12
VPS13A-210ENST00000471439 FADDQ13158 208 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 RBM48Q5RL73 367 aaKnown RBP1.82□□□□□ -2.12
VPS13A-210ENST00000471439 SYT6Q5T7P8 510 aaPredicted RBP1.82□□□□□ -2.12
VPS13A-210ENST00000471439 FA2HQ7L5A8 372 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 OR5H2Q8NGV7 314 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 TMEM263Q8WUH6 116 aaKnown RBP1.82□□□□□ -2.12
VPS13A-210ENST00000471439 ZCCHC13Q8WW36 166 aaKnown RBP1.82□□□□□ -2.12
VPS13A-210ENST00000471439 ASB17Q8WXJ9 295 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 LZICQ8WZA0 190 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 ADTRPQ96IZ2 230 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 YPEL2Q96QA6 119 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 LINC01587Q99440 93 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 PDCD1LG2Q9BQ51 273 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 GINS3Q9BRX5 216 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 PRO0255Q9UI72 69 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 HHLA3Q9XRX5 114 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 R4GN34 69 aa1.82□□□□□ -2.12
VPS13A-210ENST00000471439 TRGV2A0A075B6R0 118 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 IGKV2-24A0A0C4DH68 120 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 A0A1B0GTI1 187 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 TMEM269A0A1B0GVZ9 245 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 ANKRD20A5PA0PJZ0 165 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 TTRP02766 147 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 P0C880 135 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 HRES1P13985 223 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 CD36P16671 472 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 PSMD7P51665 324 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 NAA20P61599 178 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 RTL8BQ17RB0 113 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 SPINK13Q1W4C9 94 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 Q56UQ5 140 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 OR10J3Q5JRS4 329 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 AADACL4Q5VUY2 407 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 AMTNQ6UX39 209 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 TOMM20LQ6UXN7 152 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 FOXI2Q6ZQN5 318 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 BAP18Q8IXM2 172 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 GAPTQ8N292 157 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 OR5D18Q8NGL1 313 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 OR13C9Q8NGT0 318 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 OR6N2Q8NGY6 317 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 OR4K15Q8NH41 348 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 ORAOV1Q8WV07 137 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 SMIM8Q96KF7 97 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 METTL26Q96S19 204 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 TAF9BQ9HBM6 251 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 TAS2R1Q9NYW7 299 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 PRO0628Q9UI54 55 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 JPT1Q9UK76 154 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 TRAPPC2LQ9UL33 140 aa1.81□□□□□ -2.12
VPS13A-210ENST00000471439 CARHSP1Q9Y2V2 147 aaKnown RBP1.81□□□□□ -2.12
VPS13A-210ENST00000471439 TRAV12-2A0A075B6T6 113 aa1.8□□□□□ -2.12
VPS13A-210ENST00000471439 IGKV1-9A0A0C4DH69 117 aa1.8□□□□□ -2.12
VPS13A-210ENST00000471439 A0A1B0GVG6 124 aa1.8□□□□□ -2.12
VPS13A-210ENST00000471439 SC5DO75845 299 aa1.8□□□□□ -2.12
VPS13A-210ENST00000471439 CXorf1O96002 111 aa1.8□□□□□ -2.12
VPS13A-210ENST00000471439 IFNA7P01567 189 aa1.8□□□□□ -2.12
VPS13A-210ENST00000471439 IGHV3-53P01767 116 aa1.8□□□□□ -2.12
VPS13A-210ENST00000471439 RPL27AP46776 148 aaKnown RBP1.8□□□□□ -2.12
VPS13A-210ENST00000471439 TMEM241Q24JQ0 296 aa1.8□□□□□ -2.12
VPS13A-210ENST00000471439 PIGYQ3MUY2 71 aa1.8□□□□□ -2.12
VPS13A-210ENST00000471439 VMA21Q3ZAQ7 101 aa1.8□□□□□ -2.12
VPS13A-210ENST00000471439 C1orf137Q5JT78 98 aa1.8□□□□□ -2.12
VPS13A-210ENST00000471439 OR2T4Q8NH00 348 aa1.8□□□□□ -2.12
VPS13A-210ENST00000471439 SUN5Q8TC36 379 aa1.8□□□□□ -2.12
VPS13A-210ENST00000471439 MITD1Q8WV92 249 aa1.8□□□□□ -2.12
VPS13A-210ENST00000471439 OR52B2Q96RD2 323 aa1.8□□□□□ -2.12
VPS13A-210ENST00000471439 SLC25A31Q9H0C2 315 aa1.8□□□□□ -2.12
VPS13A-210ENST00000471439 RHOFQ9HBH0 211 aa1.8□□□□□ -2.12
VPS13A-210ENST00000471439 RBM12B-AS1Q9P1G2 102 aa1.8□□□□□ -2.12
VPS13A-210ENST00000471439 ZNF706Q9Y5V0 76 aaPredicted RBP1.8□□□□□ -2.12
VPS13A-210ENST00000471439 A0A0J9YX75 114 aa1.79□□□□□ -2.12
VPS13A-210ENST00000471439 TMEM235A6NFC5 223 aa1.79□□□□□ -2.12
VPS13A-210ENST00000471439 GGTLC3B5MD39 225 aa1.79□□□□□ -2.12
VPS13A-210ENST00000471439 MT-ND6P03923 174 aa1.79□□□□□ -2.12
VPS13A-210ENST00000471439 SAA1P0DJI8 122 aaPredicted RBP1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms