RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 LINC01587Q99440 93 aa4.71□□□□□ -1.66
PTP4A1-202ENST00000470661 TMEM208Q9BTX3 173 aa4.71□□□□□ -1.66
PTP4A1-202ENST00000470661 GFRA4Q9GZZ7 299 aa4.71□□□□□ -1.66
PTP4A1-202ENST00000470661 LYRM2Q9NU23 88 aaPredicted RBP4.71□□□□□ -1.66
PTP4A1-202ENST00000470661 SLC39A9Q9NUM3 307 aa4.71□□□□□ -1.66
PTP4A1-202ENST00000470661 YTHDF2Q9Y5A9 579 aaKnown RBP4.71□□□□□ -1.66
PTP4A1-202ENST00000470661 PXMP4Q9Y6I8 212 aa4.71□□□□□ -1.66
PTP4A1-202ENST00000470661 NACAE9PAV3 2078 aa4.7□□□□□ -1.66
PTP4A1-202ENST00000470661 TRAV10A0A0B4J240 114 aa4.7□□□□□ -1.66
PTP4A1-202ENST00000470661 CT45A10P0DMU9 189 aa4.7□□□□□ -1.66
PTP4A1-202ENST00000470661 IGLC2P0DOY2 106 aa4.7□□□□□ -1.66
PTP4A1-202ENST00000470661 DEFB130BP0DP73 79 aa4.7□□□□□ -1.66
PTP4A1-202ENST00000470661 DEFB130AP0DP74 79 aa4.7□□□□□ -1.66
PTP4A1-202ENST00000470661 NUP62P37198 522 aaPredicted RBP4.7□□□□□ -1.66
PTP4A1-202ENST00000470661 B2MP61769 119 aa4.7□□□□□ -1.66
PTP4A1-202ENST00000470661 SELENOTP62341 195 aa4.7□□□□□ -1.66
PTP4A1-202ENST00000470661 VWC2Q2TAL6 325 aa4.7□□□□□ -1.66
PTP4A1-202ENST00000470661 FFAR4Q5NUL3 377 aa4.7□□□□□ -1.66
PTP4A1-202ENST00000470661 ZNF546Q86UE3 836 aa4.7□□□□□ -1.66
PTP4A1-202ENST00000470661 OR5C1Q8NGR4 320 aa4.7□□□□□ -1.66
PTP4A1-202ENST00000470661 IGF2BP2-AS1Q96M15 143 aa4.7□□□□□ -1.66
PTP4A1-202ENST00000470661 GGACTQ9BVM4 153 aa4.7□□□□□ -1.66
PTP4A1-202ENST00000470661 ZNF331Q9NQX6 463 aaPredicted RBP4.7□□□□□ -1.66
PTP4A1-202ENST00000470661 GOLT1BQ9Y3E0 138 aa4.7□□□□□ -1.66
PTP4A1-202ENST00000470661 ALG5Q9Y673 324 aa4.7□□□□□ -1.66
PTP4A1-202ENST00000470661 DNAH11Q96DT5 4516 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 IGLV2-18A0A075B6J9 118 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 A0A087X0K7 114 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 TRAV12-3A0A0B4J271 114 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 PLAC8L1A1L4L8 177 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 A8MTW9 85 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 FNDC10F2Z333 226 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 BOLA2-SMG1P6H3BVE0 249 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 DUSP14O95147 198 aaKnown RBP4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 HBE1P02100 147 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 OR10J4P0C629 311 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 SPART-AS1P0CW21 52 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 PVALBP20472 110 aaPredicted RBP4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 S100A11P31949 105 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 MEOX2P50222 304 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 PNRC1Q12796 327 aaPredicted RBP4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 RRN3P1Q2M238 152 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 LGALS9CQ6DKI2 356 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 Q6ZRG5 221 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 PPP1R1CQ8WVI7 109 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 FAM167A-AS1Q96KT0 104 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 MARVELD1Q9BSK0 173 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 SLC25A2Q9BXI2 301 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 NPCDR1Q9BY65 106 aa4.69□□□□□ -1.66
PTP4A1-202ENST00000470661 PKHD1P08F94 4074 aa4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 IGKV2-40A0A087WW87 121 aaPredicted RBP4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 HMGB3O15347 200 aaKnown RBP4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 MPC2O95563 127 aa4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 INSP01308 110 aa4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 IGKV2D-40P01614 121 aaPredicted RBP4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 RPL29P47914 159 aaKnown RBP4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 CD300CQ08708 224 aa4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 RAB31Q13636 194 aa4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 TMEM41BQ5BJD5 291 aa4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 LCE1FQ5T754 118 aa4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 STX12Q86Y82 276 aa4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 BPIFA4PQ86YQ2 179 aa4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 KRTAP7-1Q8IUC3 87 aa4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 GPR82Q96P67 336 aa4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 VGLL1Q99990 258 aa4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 NIPSNAP3BQ9BS92 247 aa4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 NMES1Q9C002 83 aa4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 AGPAT4-IT1Q9H0P7 198 aa4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 NOP10Q9NPE3 64 aaKnown RBP4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 MBD2Q9UBB5 411 aa4.68□□□□□ -1.66
PTP4A1-202ENST00000470661 TRBV19A0A075B6N1 114 aa4.67□□□□□ -1.66
PTP4A1-202ENST00000470661 SMIM9A6NGZ8 99 aa4.67□□□□□ -1.66
PTP4A1-202ENST00000470661 E5RGE8 158 aa4.67□□□□□ -1.66
PTP4A1-202ENST00000470661 RLN2P04090 185 aa4.67□□□□□ -1.66
PTP4A1-202ENST00000470661 RNASE4P34096 147 aaKnown RBP4.67□□□□□ -1.66
PTP4A1-202ENST00000470661 DAD1P61803 113 aa4.67□□□□□ -1.66
PTP4A1-202ENST00000470661 HBG1P69891 147 aa4.67□□□□□ -1.66
PTP4A1-202ENST00000470661 HBG2P69892 147 aa4.67□□□□□ -1.66
PTP4A1-202ENST00000470661 BTN1A1Q13410 526 aa4.67□□□□□ -1.66
PTP4A1-202ENST00000470661 ATP6V1FQ16864 119 aa4.67□□□□□ -1.66
PTP4A1-202ENST00000470661 PRR9Q5T870 116 aa4.67□□□□□ -1.66
PTP4A1-202ENST00000470661 LINC00299Q6ZSB3 139 aa4.67□□□□□ -1.66
PTP4A1-202ENST00000470661 OR1L4Q8NGR5 311 aa4.67□□□□□ -1.66
PTP4A1-202ENST00000470661 WDR61Q9GZS3 305 aaKnown RBP4.67□□□□□ -1.66
PTP4A1-202ENST00000470661 TP53TG3Q9ULZ0 132 aa4.67□□□□□ -1.66
PTP4A1-202ENST00000470661 TIMM9Q9Y5J7 89 aa4.67□□□□□ -1.66
PTP4A1-202ENST00000470661 PKD1P98161 4303 aa4.67□□□□□ -1.66
PTP4A1-202ENST00000470661 KIAA1109Q2LD37 5005 aa4.67□□□□□ -1.66
PTP4A1-202ENST00000470661 MUC4Q99102 2169 aa4.66□□□□□ -1.66
PTP4A1-202ENST00000470661 A0A0J9YY99 117 aa4.66□□□□□ -1.66
PTP4A1-202ENST00000470661 C11orf94C9JXX5 98 aa4.66□□□□□ -1.66
PTP4A1-202ENST00000470661 F5H768 121 aa4.66□□□□□ -1.66
PTP4A1-202ENST00000470661 SMLR1H3BR10 107 aa4.66□□□□□ -1.66
PTP4A1-202ENST00000470661 HIST1H1EP10412 219 aaKnown RBP4.66□□□□□ -1.66
PTP4A1-202ENST00000470661 VPREB1P12018 145 aa4.66□□□□□ -1.66
PTP4A1-202ENST00000470661 RPL12P30050 165 aaKnown RBP4.66□□□□□ -1.66
PTP4A1-202ENST00000470661 DEFA1P59665 94 aa4.66□□□□□ -1.66
PTP4A1-202ENST00000470661 DEFA3P59666 94 aa4.66□□□□□ -1.66
PTP4A1-202ENST00000470661 RAB2AP61019 212 aa4.66□□□□□ -1.66
PTP4A1-202ENST00000470661 RANP62826 216 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms