RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 NPYP01303 97 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 IGHV4-39P01824 125 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 IGKV1-13P0DP09 117 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 PCBD1P61457 104 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 ZIC1Q15915 447 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 TAL2Q16559 108 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 CR1LQ2VPA4 569 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 ZNF493Q6ZR52 646 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 GOLT1AQ6ZVE7 132 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 DTX2Q86UW9 622 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 MKXQ8IYA7 352 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 FGFRL1Q8N441 504 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 RNF152Q8N8N0 203 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 GJC3Q8NFK1 279 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 MBD3L2Q8NHZ7 208 aaPredicted RBP2.23□□□□□ -2.05
LIG4-203ENST00000442234 UBALD1Q8TB05 177 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 C20orf173Q96LM9 149 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 CARD19Q96LW7 228 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 MGST2Q99735 147 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 CALYQ9NYX4 217 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 PRO0461Q9UI25 63 aa2.23□□□□□ -2.05
LIG4-203ENST00000442234 KLF13Q9Y2Y9 288 aaPredicted RBP2.23□□□□□ -2.05
LIG4-203ENST00000442234 AMMECR1Q9Y4X0 333 aaPredicted RBP2.23□□□□□ -2.05
LIG4-203ENST00000442234 MYO16Q9Y6X6 1858 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 PCNX3Q9H6A9 2034 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 IGKV1D-42A0A075B6H8 117 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 M0R1B8 84 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 LYZL6O75951 148 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 PLAUP00749 431 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 IGLV3-27P01718 113 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 RPS28P62857 69 aaKnown RBP2.22□□□□□ -2.05
LIG4-203ENST00000442234 TNFAIP6P98066 277 aaPredicted RBP2.22□□□□□ -2.05
LIG4-203ENST00000442234 MS4A18Q3C1V0 323 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 FAM120AOSQ5T036 256 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 CBLN3Q6UW01 205 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 Q6ZS92 163 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 C8orf31Q8N9H6 132 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 C10orf105Q8TEF2 133 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 C11orf52Q96A22 123 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 SLC25A2Q9BXI2 301 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 TMEM133Q9H2Q1 129 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 DKK2Q9UBU2 259 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 WDR83OSQ9Y284 106 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 PLXNB3Q9ULL4 1909 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 HECTD4Q9Y4D8 3996 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 IGKV1-9A0A0C4DH69 117 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 MGST3O14880 152 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 NDUFC2O95298 119 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 IFI27P40305 119 aaPredicted RBP2.22□□□□□ -2.05
LIG4-203ENST00000442234 TMEM258P61165 79 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 EFNB3Q15768 340 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 TMEM170BQ5T4T1 132 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 ZFP2Q6ZN57 461 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 Q6ZR03 302 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 MIR17HGQ75NE6 70 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 LYPD6Q86Y78 171 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 SPTSSAQ969W0 71 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 COQ2Q96H96 371 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 C1orf159Q96HA4 380 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 SPANXDQ9BXN6 97 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 MRPL20Q9BYC9 149 aaKnown RBP2.22□□□□□ -2.05
LIG4-203ENST00000442234 RPP21Q9H633 154 aaKnown RBP2.22□□□□□ -2.05
LIG4-203ENST00000442234 FOXA2Q9Y261 457 aaPredicted RBP2.22□□□□□ -2.05
LIG4-203ENST00000442234 LRRK1Q38SD2 2015 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 NUP210LQ5VU65 1888 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 TRAV41A0A0B4J266 112 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 M0R2P5 195 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 ZIC3O60481 467 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 CT62P0C5K7 136 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 CDAP32320 146 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 SSR4P51571 173 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 ADORA2A-AS1P86434 159 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 TMEM52BQ4KMG9 183 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 GDF5OSQ5U4N7 250 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 C2orf82Q6UX34 121 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 Q8N1Y9 231 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 ABHD12Q8N2K0 398 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 LINC00526Q96FQ7 95 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 URB1-AS1Q96HZ7 61 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 FBN3Q75N90 2809 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 DSCAML1Q8TD84 2053 aa2.22□□□□□ -2.05
LIG4-203ENST00000442234 A0A1B0GUT8 65 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 C15orf62A8K5M9 175 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 C4orf51C9J302 202 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 NDUFA3O95167 84 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 TCL1BO95988 128 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 IGHG1P01857 330 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 CRYGBP07316 175 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 COX6A1P12074 109 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 CKS2P33552 79 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 CT83Q5H943 113 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 DEFB108BQ8NET1 73 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 MYOZ3Q8TDC0 251 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 PHLDA1Q8WV24 401 aaPredicted RBP2.21□□□□□ -2.06
LIG4-203ENST00000442234 TMEM158Q8WZ71 300 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 AICDAQ9GZX7 198 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 FAM90A10PA6NDY2 464 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 FRG2CA6NGY1 282 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 M0R135 149 aa2.21□□□□□ -2.06
LIG4-203ENST00000442234 PEX7O00628 323 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms