RNA–Protein interactions for RNA: ENST00000441080.2

PFDN4-202, Transcript of prefoldin subunit 4, humanhuman

TSL 5

Gene PFDN4, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-202ENST00000441080 CCSMST1Q4G0I0 132 aa0.18□□□□□ -2.38
PFDN4-202ENST00000441080 LXNQ9BS40 222 aa0.18□□□□□ -2.38
PFDN4-202ENST00000441080 MRPL35Q9NZE8 188 aaKnown RBP0.18□□□□□ -2.38
PFDN4-202ENST00000441080 FGD6Q6ZV73 1430 aa0.18□□□□□ -2.38
PFDN4-202ENST00000441080 SYNMO15061 1565 aa0.18□□□□□ -2.38
PFDN4-202ENST00000441080 ROCK1Q13464 1354 aa0.18□□□□□ -2.38
PFDN4-202ENST00000441080 DLC1Q96QB1 1528 aa0.18□□□□□ -2.38
PFDN4-202ENST00000441080 BDP1A6H8Y1 2624 aa0.17□□□□□ -2.38
PFDN4-202ENST00000441080 TRAV13-1A0A0B4J241 112 aa0.17□□□□□ -2.38
PFDN4-202ENST00000441080 RPL37P61927 97 aaKnown RBP0.17□□□□□ -2.38
PFDN4-202ENST00000441080 FXYD3Q14802 87 aa0.17□□□□□ -2.38
PFDN4-202ENST00000441080 MRPL36Q9P0J6 103 aaKnown RBP0.17□□□□□ -2.38
PFDN4-202ENST00000441080 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.16□□□□□ -2.38
PFDN4-202ENST00000441080 LOC101927531A0A1B0GV80 90 aa0.16□□□□□ -2.38
PFDN4-202ENST00000441080 H3BMG7 143 aa0.16□□□□□ -2.38
PFDN4-202ENST00000441080 PPP1R2P3Q6NXS1 205 aa0.16□□□□□ -2.38
PFDN4-202ENST00000441080 PCBD2Q9H0N5 130 aa0.16□□□□□ -2.38
PFDN4-202ENST00000441080 C19orf12Q9NSK7 152 aa0.16□□□□□ -2.38
PFDN4-202ENST00000441080 COMMD3Q9UBI1 195 aa0.16□□□□□ -2.38
PFDN4-202ENST00000441080 CTTNBP2Q8WZ74 1663 aa0.16□□□□□ -2.38
PFDN4-202ENST00000441080 SSPOA2VEC9 5147 aa0.15□□□□□ -2.38
PFDN4-202ENST00000441080 NBDYA0A0U1RRE5 68 aa0.15□□□□□ -2.39
PFDN4-202ENST00000441080 A0A1W2PRE2 83 aa0.15□□□□□ -2.39
PFDN4-202ENST00000441080 HRCT1Q6UXD1 115 aa0.15□□□□□ -2.39
PFDN4-202ENST00000441080 DEFB132Q7Z7B7 95 aa0.15□□□□□ -2.39
PFDN4-202ENST00000441080 MORN4Q8NDC4 146 aa0.15□□□□□ -2.39
PFDN4-202ENST00000441080 ATPIF1Q9UII2 106 aa0.15□□□□□ -2.39
PFDN4-202ENST00000441080 TCOF1Q13428 1488 aaKnown RBP0.15□□□□□ -2.39
PFDN4-202ENST00000441080 MYH3P11055 1940 aa0.15□□□□□ -2.39
PFDN4-202ENST00000441080 SYNE1Q8NF91 8797 aaKnown RBP0.15□□□□□ -2.39
PFDN4-202ENST00000441080 HIGD1CA8MV81 97 aa0.14□□□□□ -2.39
PFDN4-202ENST00000441080 EDF1O60869 148 aaKnown RBP0.14□□□□□ -2.39
PFDN4-202ENST00000441080 IGF2P01344 180 aa0.14□□□□□ -2.39
PFDN4-202ENST00000441080 SLC25A4P12235 298 aa0.14□□□□□ -2.39
PFDN4-202ENST00000441080 SRP9P49458 86 aaKnown RBP0.14□□□□□ -2.39
PFDN4-202ENST00000441080 GTF2A1P52655 376 aaPredicted RBP0.14□□□□□ -2.39
PFDN4-202ENST00000441080 ASB16-AS1Q495Z4 193 aa0.14□□□□□ -2.39
PFDN4-202ENST00000441080 C5orf56Q8N8D9 126 aa0.14□□□□□ -2.39
PFDN4-202ENST00000441080 OR8J3Q8NGG0 315 aa0.14□□□□□ -2.39
PFDN4-202ENST00000441080 MED31Q9Y3C7 131 aa0.14□□□□□ -2.39
PFDN4-202ENST00000441080 MAST4O15021 2626 aa0.13□□□□□ -2.39
PFDN4-202ENST00000441080 TMEM30CPA0ZSE6 113 aa0.13□□□□□ -2.39
PFDN4-202ENST00000441080 TMEM189A5PLL7 270 aa0.13□□□□□ -2.39
PFDN4-202ENST00000441080 IFITM5A6NNB3 132 aa0.13□□□□□ -2.39
PFDN4-202ENST00000441080 E7EQ34 232 aa0.13□□□□□ -2.39
PFDN4-202ENST00000441080 FXYD1O00168 92 aa0.13□□□□□ -2.39
PFDN4-202ENST00000441080 FAM107AO95990 144 aa0.13□□□□□ -2.39
PFDN4-202ENST00000441080 BLCAPP62952 87 aa0.13□□□□□ -2.39
PFDN4-202ENST00000441080 OR51A4Q8NGJ6 313 aa0.13□□□□□ -2.39
PFDN4-202ENST00000441080 BCORL1Q5H9F3 1711 aa0.13□□□□□ -2.39
PFDN4-202ENST00000441080 TRBV7-6A0A0J9YX20 115 aa0.12□□□□□ -2.39
PFDN4-202ENST00000441080 CRYGSP22914 178 aa0.12□□□□□ -2.39
PFDN4-202ENST00000441080 ETV6P41212 452 aa0.12□□□□□ -2.39
PFDN4-202ENST00000441080 LYPD5Q6UWN5 251 aa0.12□□□□□ -2.39
PFDN4-202ENST00000441080 THEM6Q8WUY1 208 aa0.12□□□□□ -2.39
PFDN4-202ENST00000441080 SMIM7Q9BQ49 75 aa0.12□□□□□ -2.39
PFDN4-202ENST00000441080 SPRR2GQ9BYE4 73 aa0.12□□□□□ -2.39
PFDN4-202ENST00000441080 CDC42EP2O14613 210 aa0.11□□□□□ -2.39
PFDN4-202ENST00000441080 TPST1O60507 370 aa0.11□□□□□ -2.39
PFDN4-202ENST00000441080 CD3DP04234 171 aa0.11□□□□□ -2.39
PFDN4-202ENST00000441080 LSM3P62310 102 aaKnown RBP0.11□□□□□ -2.39
PFDN4-202ENST00000441080 TRAPPC2LQ9UL33 140 aa0.11□□□□□ -2.39
PFDN4-202ENST00000441080 FAM135BQ49AJ0 1406 aa0.11□□□□□ -2.39
PFDN4-202ENST00000441080 IGKCP01834 107 aa0.1□□□□□ -2.39
PFDN4-202ENST00000441080 IFITM1P13164 125 aa0.1□□□□□ -2.39
PFDN4-202ENST00000441080 RHOHQ15669 191 aa0.1□□□□□ -2.39
PFDN4-202ENST00000441080 CBLN4Q9NTU7 201 aa0.1□□□□□ -2.39
PFDN4-202ENST00000441080 USP54Q70EL1 1684 aa0.09□□□□□ -2.39
PFDN4-202ENST00000441080 LOC107984640A0A0U1RRK4 108 aa0.09□□□□□ -2.4
PFDN4-202ENST00000441080 TNFP01375 233 aa0.09□□□□□ -2.4
PFDN4-202ENST00000441080 IL7P13232 177 aa0.09□□□□□ -2.4
PFDN4-202ENST00000441080 POLR2HP52434 150 aaKnown RBP0.09□□□□□ -2.4
PFDN4-202ENST00000441080 IDO2Q6ZQW0 420 aa0.09□□□□□ -2.4
PFDN4-202ENST00000441080 DMAC1Q96GE9 116 aa0.09□□□□□ -2.4
PFDN4-202ENST00000441080 ANKRD31Q8N7Z5 1873 aa0.09□□□□□ -2.4
PFDN4-202ENST00000441080 KIAA1549LQ6ZVL6 1849 aa0.08□□□□□ -2.4
PFDN4-202ENST00000441080 NUP210Q8TEM1 1887 aaPredicted RBP0.08□□□□□ -2.4
PFDN4-202ENST00000441080 TPRP12270 2363 aaKnown RBP0.08□□□□□ -2.4
PFDN4-202ENST00000441080 A0A0G2JMM0 328 aa0.08□□□□□ -2.4
PFDN4-202ENST00000441080 M0QZK8 103 aa0.08□□□□□ -2.4
PFDN4-202ENST00000441080 HBDP02042 147 aa0.08□□□□□ -2.4
PFDN4-202ENST00000441080 IQCJQ1A5X6 159 aa0.08□□□□□ -2.4
PFDN4-202ENST00000441080 TANC2Q9HCD6 1990 aa0.08□□□□□ -2.4
PFDN4-202ENST00000441080 RPL7P18124 248 aaKnown RBP0.07□□□□□ -2.4
PFDN4-202ENST00000441080 BRK1Q8WUW1 75 aa0.07□□□□□ -2.4
PFDN4-202ENST00000441080 NAT14Q8WUY8 206 aa0.07□□□□□ -2.4
PFDN4-202ENST00000441080 ATG5Q9H1Y0 275 aa0.07□□□□□ -2.4
PFDN4-202ENST00000441080 ZCCHC11Q5TAX3 1644 aaKnown RBP0.06□□□□□ -2.4
PFDN4-202ENST00000441080 ANK1P16157 1881 aa0.06□□□□□ -2.4
PFDN4-202ENST00000441080 A2MP01023 1474 aa0.06□□□□□ -2.4
PFDN4-202ENST00000441080 LOC730098B7Z3J9 87 aa0.06□□□□□ -2.4
PFDN4-202ENST00000441080 CFDP00746 253 aaPredicted RBP0.06□□□□□ -2.4
PFDN4-202ENST00000441080 CKS2P33552 79 aa0.06□□□□□ -2.4
PFDN4-202ENST00000441080 RPL22P35268 128 aaKnown RBP0.06□□□□□ -2.4
PFDN4-202ENST00000441080 IGHV1-24A0A0C4DH33 117 aa0.05□□□□□ -2.4
PFDN4-202ENST00000441080 SPINK1P00995 79 aa0.05□□□□□ -2.4
PFDN4-202ENST00000441080 KLKP1Q107X0 134 aa0.05□□□□□ -2.4
PFDN4-202ENST00000441080 OR5A2Q8NGI9 324 aa0.05□□□□□ -2.4
PFDN4-202ENST00000441080 OR9Q1Q8NGQ5 310 aa0.05□□□□□ -2.4
PFDN4-202ENST00000441080 FAM213BQ8TBF2 198 aa0.05□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms