RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 TRBV24-1A0A075B6N3 115 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 FABP1P07148 127 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 CXCL1P09341 107 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 RD3LP0DJH9 198 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 RPL35P42766 123 aaKnown RBP4.66□□□□□ -1.66
SPEN-202ENST00000438066 YPEL3P61236 119 aaPredicted RBP4.66□□□□□ -1.66
SPEN-202ENST00000438066 LYZP61626 148 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 TCEAL7Q9BRU2 100 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 MRPL27Q9P0M9 148 aaKnown RBP4.66□□□□□ -1.66
SPEN-202ENST00000438066 HIGD1AQ9Y241 93 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 URGCP-MRPS24S4R325 110 aa4.66□□□□□ -1.66
SPEN-202ENST00000438066 PDZD2O15018 2839 aa4.65□□□□□ -1.66
SPEN-202ENST00000438066 CCDC168Q8NDH2 2452 aa4.65□□□□□ -1.66
SPEN-202ENST00000438066 ZFHX3Q15911 3703 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 TRAV30A0A087WSZ9 112 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 TGIF2-C20orf24A0A0A6YYL0 155 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 WI2-2373I1.2A0A1W2PRP0 233 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 H3BRN7 92 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 H7BYZ3 331 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 K7EN84 100 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 PFN1P07737 140 aaKnown RBP4.65□□□□□ -1.67
SPEN-202ENST00000438066 IGLL1P15814 213 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 HIST1H1BP16401 226 aaKnown RBP4.65□□□□□ -1.67
SPEN-202ENST00000438066 CRYBB3P26998 211 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 LOXL1Q08397 574 aaPredicted RBP4.65□□□□□ -1.67
SPEN-202ENST00000438066 KRTAP24-1Q3LI83 254 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 ZNF329Q86UD4 541 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 Q8N377 158 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 OR5T1Q8NG75 326 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 ZNF414Q96IQ9 312 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 IGF2BP2-AS1Q96M15 143 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 PYGO2Q9BRQ0 406 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 SHANK2-AS3Q9BTD1 123 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 SLC25A39Q9BZJ4 359 aaPredicted RBP4.65□□□□□ -1.67
SPEN-202ENST00000438066 RETNQ9HD89 108 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 C21orf62Q9NYP8 219 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 TMEM14CQ9P0S9 112 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 S4R3C0 116 aa4.65□□□□□ -1.67
SPEN-202ENST00000438066 MYO9AB2RTY4 2548 aa4.64□□□□□ -1.67
SPEN-202ENST00000438066 A6NDX4 124 aa4.64□□□□□ -1.67
SPEN-202ENST00000438066 C1orf196B1AJZ1 125 aa4.64□□□□□ -1.67
SPEN-202ENST00000438066 J3QLI3 93 aa4.64□□□□□ -1.67
SPEN-202ENST00000438066 GNG7O60262 68 aa4.64□□□□□ -1.67
SPEN-202ENST00000438066 IL4P05112 153 aa4.64□□□□□ -1.67
SPEN-202ENST00000438066 CTSGP08311 255 aa4.64□□□□□ -1.67
SPEN-202ENST00000438066 RAB5BP61020 215 aa4.64□□□□□ -1.67
SPEN-202ENST00000438066 USF2Q15853 346 aaPredicted RBP4.64□□□□□ -1.67
SPEN-202ENST00000438066 DEFB113Q30KQ7 82 aa4.64□□□□□ -1.67
SPEN-202ENST00000438066 CENPWQ5EE01 88 aa4.64□□□□□ -1.67
SPEN-202ENST00000438066 UNQ5815/PRO19632Q6UWF5 114 aa4.64□□□□□ -1.67
SPEN-202ENST00000438066 ZNF502Q8TBZ5 544 aa4.64□□□□□ -1.67
SPEN-202ENST00000438066 SFRP2Q96HF1 295 aa4.64□□□□□ -1.67
SPEN-202ENST00000438066 SOX21Q9Y651 276 aaPredicted RBP4.64□□□□□ -1.67
SPEN-202ENST00000438066 G3V318 75 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 H3BUX3 64 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 PEX7O00628 323 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 PHOX2AO14813 284 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 MRPS12O15235 138 aaKnown RBP4.63□□□□□ -1.67
SPEN-202ENST00000438066 GGCTO75223 188 aaKnown RBP4.63□□□□□ -1.67
SPEN-202ENST00000438066 IGLV2-8P01709 118 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 NBEAP1P0C6P0 100 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 IGLC2P0DOY2 106 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 SRP14P37108 136 aaKnown RBP4.63□□□□□ -1.67
SPEN-202ENST00000438066 GALR1P47211 349 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 GNG4P50150 75 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 RHOGP84095 191 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 C15orf32Q32M92 178 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 Q56UQ5 140 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 ZFP82Q8N141 532 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 NECAP1Q8NC96 275 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 FAM210BQ96KR6 192 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 IMMP2LQ96T52 175 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 GNB4Q9HAV0 340 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 ZMAT5Q9UDW3 170 aaKnown RBP4.63□□□□□ -1.67
SPEN-202ENST00000438066 MDFIC2A0A1B0GVS7 189 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 OR2T8A6NH00 312 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 M0QZK8 103 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 DUSP14O95147 198 aaKnown RBP4.63□□□□□ -1.67
SPEN-202ENST00000438066 IGHG2P01859 326 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 TYMSP04818 313 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 HIST1H1EP10412 219 aaKnown RBP4.63□□□□□ -1.67
SPEN-202ENST00000438066 RPS10P46783 165 aaKnown RBP4.63□□□□□ -1.67
SPEN-202ENST00000438066 TAS2R60P59551 318 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 RANP62826 216 aaKnown RBP4.63□□□□□ -1.67
SPEN-202ENST00000438066 SLAQ13239 276 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 C5orf17Q8NAS9 161 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 BLNKQ8WV28 456 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 CHCHD10Q8WYQ3 142 aaPredicted RBP4.63□□□□□ -1.67
SPEN-202ENST00000438066 LINC00479Q96M42 142 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 OR5B12Q96R08 314 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 BIN3Q9NQY0 253 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 ZNF586Q9NXT0 402 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 KLF12Q9Y4X4 402 aa4.63□□□□□ -1.67
SPEN-202ENST00000438066 NBPF19A0A087WUL8 3843 aa4.62□□□□□ -1.67
SPEN-202ENST00000438066 TRBV19A0A075B6N1 114 aa4.62□□□□□ -1.67
SPEN-202ENST00000438066 A0A087WYN8 130 aa4.62□□□□□ -1.67
SPEN-202ENST00000438066 TRAV41A0A0B4J266 112 aa4.62□□□□□ -1.67
SPEN-202ENST00000438066 FAM231BA6NCW3 169 aa4.62□□□□□ -1.67
SPEN-202ENST00000438066 RBMY1BA6NDE4 496 aaKnown RBP4.62□□□□□ -1.67
SPEN-202ENST00000438066 RBMY1EA6NEQ0 496 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms