RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 PLXNB3Q9ULL4 1909 aa9.31□□□□□ -0.92
PTCH1-209ENST00000437951 PRDM6Q9NQX0 595 aa9.31□□□□□ -0.92
PTCH1-209ENST00000437951 C9JQL5 133 aa9.31□□□□□ -0.92
PTCH1-209ENST00000437951 RFPL3SP0C7P2 107 aa9.31□□□□□ -0.92
PTCH1-209ENST00000437951 CGB3P0DN86 165 aa9.31□□□□□ -0.92
PTCH1-209ENST00000437951 OTOGLQ3ZCN5 2332 aa9.31□□□□□ -0.92
PTCH1-209ENST00000437951 TMEM213A2RRL7 107 aa9.31□□□□□ -0.92
PTCH1-209ENST00000437951 UBE2BP63146 152 aa9.31□□□□□ -0.92
PTCH1-209ENST00000437951 MRPL23Q16540 153 aaKnown RBP9.31□□□□□ -0.92
PTCH1-209ENST00000437951 FAM201AQ5SY85 155 aa9.31□□□□□ -0.92
PTCH1-209ENST00000437951 TRBV19A0A075B6N1 114 aa9.31□□□□□ -0.92
PTCH1-209ENST00000437951 CGB7P0DN87 165 aa9.31□□□□□ -0.92
PTCH1-209ENST00000437951 UQCRQO14949 82 aa9.3□□□□□ -0.92
PTCH1-209ENST00000437951 PNRC2Q9NPJ4 139 aaKnown RBP9.3□□□□□ -0.92
PTCH1-209ENST00000437951 DUX4L9Q6RFH8 374 aaPredicted RBP9.3□□□□□ -0.92
PTCH1-209ENST00000437951 SLC25A29Q8N8R3 303 aa9.3□□□□□ -0.92
PTCH1-209ENST00000437951 ZNF883P0CG24 379 aa9.3□□□□□ -0.92
PTCH1-209ENST00000437951 CR1LQ2VPA4 569 aa9.3□□□□□ -0.92
PTCH1-209ENST00000437951 VMO1Q7Z5L0 202 aa9.3□□□□□ -0.92
PTCH1-209ENST00000437951 VSIG2Q96IQ7 327 aa9.3□□□□□ -0.92
PTCH1-209ENST00000437951 ARHGAP32A7KAX9 2087 aa9.3□□□□□ -0.92
PTCH1-209ENST00000437951 PROP1O75360 226 aa9.3□□□□□ -0.92
PTCH1-209ENST00000437951 ZMAT4Q9H898 229 aa9.3□□□□□ -0.92
PTCH1-209ENST00000437951 NDUFC2-KCTD14E9PQ53 114 aa9.3□□□□□ -0.92
PTCH1-209ENST00000437951 IGLV3-12A0A075B6K2 115 aa9.29□□□□□ -0.92
PTCH1-209ENST00000437951 LINC01620Q4KN68 170 aa9.29□□□□□ -0.92
PTCH1-209ENST00000437951 AMTNQ6UX39 209 aa9.29□□□□□ -0.92
PTCH1-209ENST00000437951 PRRC2AP48634 2157 aaKnown RBP9.29□□□□□ -0.92
PTCH1-209ENST00000437951 IGKV1-12A0A0C4DH73 117 aa9.29□□□□□ -0.92
PTCH1-209ENST00000437951 IGKV1D-12P01611 117 aa9.29□□□□□ -0.92
PTCH1-209ENST00000437951 SP7Q8TDD2 431 aaPredicted RBP9.29□□□□□ -0.92
PTCH1-209ENST00000437951 PTPRQQ9UMZ3 2332 aa9.29□□□□□ -0.92
PTCH1-209ENST00000437951 ADAMTS9Q9P2N4 1935 aa9.29□□□□□ -0.92
PTCH1-209ENST00000437951 CLPSL1A2RUU4 121 aa9.29□□□□□ -0.92
PTCH1-209ENST00000437951 ZNF134P52741 427 aa9.29□□□□□ -0.92
PTCH1-209ENST00000437951 C3orf36Q3SXR2 165 aa9.29□□□□□ -0.92
PTCH1-209ENST00000437951 ZNF747Q9BV97 191 aa9.29□□□□□ -0.92
PTCH1-209ENST00000437951 RBAKDNA6NC62 111 aa9.29□□□□□ -0.92
PTCH1-209ENST00000437951 FAM27E3Q08E93 113 aa9.29□□□□□ -0.92
PTCH1-209ENST00000437951 Q6P435 159 aa9.29□□□□□ -0.92
PTCH1-209ENST00000437951 C8orf49Q96NF6 230 aa9.28□□□□□ -0.92
PTCH1-209ENST00000437951 IGHV1-46P01743 117 aa9.28□□□□□ -0.92
PTCH1-209ENST00000437951 IGHV1OR15-1A0A075B7D0 117 aa9.28□□□□□ -0.92
PTCH1-209ENST00000437951 IGHV1-18A0A0C4DH31 117 aa9.28□□□□□ -0.92
PTCH1-209ENST00000437951 ZFP2Q6ZN57 461 aa9.28□□□□□ -0.92
PTCH1-209ENST00000437951 RHPN1-AS1Q9BWJ2 59 aa9.28□□□□□ -0.92
PTCH1-209ENST00000437951 A0A1B0GUS0 222 aa9.28□□□□□ -0.92
PTCH1-209ENST00000437951 C20orf204Q6ZNR8 217 aa9.28□□□□□ -0.92
PTCH1-209ENST00000437951 SPACA3Q8IXA5 215 aa9.28□□□□□ -0.92
PTCH1-209ENST00000437951 C11orf44Q8N8P7 122 aa9.28□□□□□ -0.92
PTCH1-209ENST00000437951 PRR25Q96S07 402 aa9.28□□□□□ -0.92
PTCH1-209ENST00000437951 IGKV1-27A0A075B6S5 117 aa9.28□□□□□ -0.92
PTCH1-209ENST00000437951 LINC00473A8K010 186 aa9.28□□□□□ -0.92
PTCH1-209ENST00000437951 TRAV26-1A0A087WT03 109 aa9.27□□□□□ -0.92
PTCH1-209ENST00000437951 TRAV3A0A0B4J244 114 aa9.27□□□□□ -0.92
PTCH1-209ENST00000437951 TMEM178BH3BS89 294 aa9.27□□□□□ -0.92
PTCH1-209ENST00000437951 NDUFC1O43677 76 aa9.27□□□□□ -0.92
PTCH1-209ENST00000437951 C8orf31Q8N9H6 132 aa9.27□□□□□ -0.92
PTCH1-209ENST00000437951 LYPD6BQ8NI32 183 aa9.27□□□□□ -0.92
PTCH1-209ENST00000437951 LINC00643Q86TS7 51 aa9.27□□□□□ -0.93
PTCH1-209ENST00000437951 TRBV10-2A0A0K0K1G8 114 aa9.27□□□□□ -0.93
PTCH1-209ENST00000437951 LTAP01374 205 aa9.27□□□□□ -0.93
PTCH1-209ENST00000437951 ATP5EP2Q5VTU8 51 aa9.27□□□□□ -0.93
PTCH1-209ENST00000437951 LINC00527Q9UJ94 153 aa9.27□□□□□ -0.93
PTCH1-209ENST00000437951 PAX9P55771 341 aa9.27□□□□□ -0.93
PTCH1-209ENST00000437951 NREPQ16612 68 aa9.27□□□□□ -0.93
PTCH1-209ENST00000437951 FGFBP3Q8TAT2 258 aa9.27□□□□□ -0.93
PTCH1-209ENST00000437951 WFDC12Q8WWY7 111 aa9.27□□□□□ -0.93
PTCH1-209ENST00000437951 K7EM74 188 aa9.26□□□□□ -0.93
PTCH1-209ENST00000437951 ZNF837Q96EG3 531 aaPredicted RBP9.26□□□□□ -0.93
PTCH1-209ENST00000437951 LENEPQ9Y5L5 61 aa9.26□□□□□ -0.93
PTCH1-209ENST00000437951 MALRD1Q5VYJ5 2156 aa9.26□□□□□ -0.93
PTCH1-209ENST00000437951 CRYGCP07315 174 aa9.26□□□□□ -0.93
PTCH1-209ENST00000437951 C20orf173Q96LM9 149 aa9.26□□□□□ -0.93
PTCH1-209ENST00000437951 TMEM256-PLSCR3K7ERE1 68 aa9.26□□□□□ -0.93
PTCH1-209ENST00000437951 NDUFA4L2Q9NRX3 87 aa9.26□□□□□ -0.93
PTCH1-209ENST00000437951 EML5Q05BV3 1969 aa9.26□□□□□ -0.93
PTCH1-209ENST00000437951 PRR15LQ9BU68 103 aa9.26□□□□□ -0.93
PTCH1-209ENST00000437951 U3KQE9 123 aa9.26□□□□□ -0.93
PTCH1-209ENST00000437951 K7ERS5 55 aa9.26□□□□□ -0.93
PTCH1-209ENST00000437951 OPRPNQ99935 248 aaPredicted RBP9.26□□□□□ -0.93
PTCH1-209ENST00000437951 H3BRN7 92 aa9.26□□□□□ -0.93
PTCH1-209ENST00000437951 NDUFV3P56181 108 aaKnown RBP9.26□□□□□ -0.93
PTCH1-209ENST00000437951 MRPL53Q96EL3 112 aaKnown RBP9.26□□□□□ -0.93
PTCH1-209ENST00000437951 CYYR1Q96J86 154 aa9.26□□□□□ -0.93
PTCH1-209ENST00000437951 IGHV3-53P01767 116 aa9.25□□□□□ -0.93
PTCH1-209ENST00000437951 Q6ZUT4 128 aa9.25□□□□□ -0.93
PTCH1-209ENST00000437951 DSCAML1Q8TD84 2053 aa9.25□□□□□ -0.93
PTCH1-209ENST00000437951 DYNAPQ8N1N2 210 aa9.25□□□□□ -0.93
PTCH1-209ENST00000437951 LINC00479Q96M42 142 aa9.25□□□□□ -0.93
PTCH1-209ENST00000437951 DKK2Q9UBU2 259 aa9.25□□□□□ -0.93
PTCH1-209ENST00000437951 SH2D6Q7Z4S9 175 aa9.25□□□□□ -0.93
PTCH1-209ENST00000437951 FAM110DQ8TAY7 271 aaPredicted RBP9.25□□□□□ -0.93
PTCH1-209ENST00000437951 CRYGBP07316 175 aa9.25□□□□□ -0.93
PTCH1-209ENST00000437951 NDPQ00604 133 aa9.25□□□□□ -0.93
PTCH1-209ENST00000437951 RPL35AP18077 110 aaKnown RBP9.25□□□□□ -0.93
PTCH1-209ENST00000437951 PIP4P2Q8N4L2 257 aa9.25□□□□□ -0.93
PTCH1-209ENST00000437951 CD177Q8N6Q3 437 aa9.25□□□□□ -0.93
PTCH1-209ENST00000437951 C9orf106Q8NAJ2 232 aa9.25□□□□□ -0.93
PTCH1-209ENST00000437951 SLX1AQ9BQ83 275 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms