RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 PCNX3Q9H6A9 2034 aa10.13□□□□□ -0.79
PTCH1-207ENST00000429896 PSG3Q16557 428 aa10.12□□□□□ -0.79
PTCH1-207ENST00000429896 ZNF114Q8NC26 417 aa10.12□□□□□ -0.79
PTCH1-207ENST00000429896 CACNA1AO00555 2505 aa10.12□□□□□ -0.79
PTCH1-207ENST00000429896 ORMDL2Q53FV1 153 aa10.12□□□□□ -0.79
PTCH1-207ENST00000429896 TEX43Q6ZNM6 134 aa10.12□□□□□ -0.79
PTCH1-207ENST00000429896 C5orf30Q96GV9 206 aa10.12□□□□□ -0.79
PTCH1-207ENST00000429896 PAX9P55771 341 aa10.12□□□□□ -0.79
PTCH1-207ENST00000429896 RPL36AP83881 106 aaKnown RBP10.12□□□□□ -0.79
PTCH1-207ENST00000429896 DYNAPQ8N1N2 210 aa10.12□□□□□ -0.79
PTCH1-207ENST00000429896 RPL36ALQ969Q0 106 aaKnown RBP10.12□□□□□ -0.79
PTCH1-207ENST00000429896 A0A1B0GW15 77 aa10.12□□□□□ -0.79
PTCH1-207ENST00000429896 GAGE12JA6NER3 117 aa10.12□□□□□ -0.79
PTCH1-207ENST00000429896 SLURP1P55000 103 aa10.12□□□□□ -0.79
PTCH1-207ENST00000429896 RPL32P62910 135 aaKnown RBP10.12□□□□□ -0.79
PTCH1-207ENST00000429896 GAGE1Q13065 139 aa10.12□□□□□ -0.79
PTCH1-207ENST00000429896 GAGE4Q13068 117 aa10.12□□□□□ -0.79
PTCH1-207ENST00000429896 GAGE5Q13069 117 aa10.12□□□□□ -0.79
PTCH1-207ENST00000429896 GAGE13Q4V321 117 aa10.12□□□□□ -0.79
PTCH1-207ENST00000429896 MYCNOSP40205 109 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 SAMD5Q5TGI4 173 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 TMEM170AQ8WVE7 144 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 C4orf3Q8WVX3 66 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 A0A087X0K7 114 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 OCIAD2Q56VL3 154 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 MALRD1Q5VYJ5 2156 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 THAP8Q8NA92 274 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 TRAV12-2A0A075B6T6 113 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 F8WEM9 126 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 HIST1H2BKO60814 126 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 HIST1H2BJP06899 126 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 CXCL1P09341 107 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 IGLC1P0CG04 106 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 HIST1H2BOP23527 126 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 HIST1H2BBP33778 126 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 HIST1H2BDP58876 126 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 HIST1H2BCP62807 126 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 HIST2H2BEQ16778 126 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.11□□□□□ -0.79
PTCH1-207ENST00000429896 HIST1H2BHQ93079 126 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 HIST1H2BNQ99877 126 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 HIST1H2BMQ99879 126 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 FREM1Q5H8C1 2179 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 C8orf49Q96NF6 230 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 CENPFP49454 3210 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 APOC4P55056 127 aa10.11□□□□□ -0.79
PTCH1-207ENST00000429896 PDE6HQ13956 83 aa10.1□□□□□ -0.79
PTCH1-207ENST00000429896 ATXN8Q156A1 80 aa10.1□□□□□ -0.79
PTCH1-207ENST00000429896 SPINK13Q1W4C9 94 aa10.1□□□□□ -0.79
PTCH1-207ENST00000429896 IGLV11-55A0A075B6I3 123 aa10.1□□□□□ -0.79
PTCH1-207ENST00000429896 TRBV24-1A0A075B6N3 115 aa10.1□□□□□ -0.79
PTCH1-207ENST00000429896 IL15RAQ13261 267 aa10.1□□□□□ -0.79
PTCH1-207ENST00000429896 ORAOV1Q8WV07 137 aa10.1□□□□□ -0.79
PTCH1-207ENST00000429896 VWC2LB2RUY7 222 aa10.1□□□□□ -0.79
PTCH1-207ENST00000429896 MORN3Q6PF18 240 aaPredicted RBP10.1□□□□□ -0.79
PTCH1-207ENST00000429896 ZNF479Q96JC4 524 aa10.1□□□□□ -0.79
PTCH1-207ENST00000429896 PFN2P35080 140 aa10.1□□□□□ -0.79
PTCH1-207ENST00000429896 RPP25LQ8N5L8 163 aaKnown RBP10.1□□□□□ -0.79
PTCH1-207ENST00000429896 TSKUQ8WUA8 353 aa10.1□□□□□ -0.79
PTCH1-207ENST00000429896 H3BRN7 92 aa10.09□□□□□ -0.79
PTCH1-207ENST00000429896 AJUBAQ96IF1 538 aa10.09□□□□□ -0.79
PTCH1-207ENST00000429896 AMBPP02760 352 aa10.09□□□□□ -0.79
PTCH1-207ENST00000429896 LINC00479Q96M42 142 aa10.09□□□□□ -0.79
PTCH1-207ENST00000429896 DYSFO75923 2080 aa10.09□□□□□ -0.79
PTCH1-207ENST00000429896 F2Z2F3 143 aa10.09□□□□□ -0.79
PTCH1-207ENST00000429896 IGLV2-14P01704 120 aa10.09□□□□□ -0.79
PTCH1-207ENST00000429896 GAGE2EQ4V326 116 aa10.09□□□□□ -0.79
PTCH1-207ENST00000429896 GAGE2DQ9UEU5 116 aa10.09□□□□□ -0.79
PTCH1-207ENST00000429896 KIAA2026Q5HYC2 2103 aa10.09□□□□□ -0.79
PTCH1-207ENST00000429896 AKAP6Q13023 2319 aa10.09□□□□□ -0.79
PTCH1-207ENST00000429896 LINC00587B1AMM8 73 aa10.09□□□□□ -0.79
PTCH1-207ENST00000429896 NCKAP5O14513 1909 aa10.09□□□□□ -0.79
PTCH1-207ENST00000429896 A8MWV9 139 aa10.09□□□□□ -0.79
PTCH1-207ENST00000429896 SMPXQ9UHP9 88 aa10.09□□□□□ -0.79
PTCH1-207ENST00000429896 C9JQL5 133 aa10.08□□□□□ -0.8
PTCH1-207ENST00000429896 GAGE2AQ6NT46 116 aa10.08□□□□□ -0.8
PTCH1-207ENST00000429896 MS4A6AQ9H2W1 248 aa10.08□□□□□ -0.8
PTCH1-207ENST00000429896 SMR3AQ99954 134 aa10.08□□□□□ -0.8
PTCH1-207ENST00000429896 IGHV4OR15-8A0A075B7B6 117 aa10.08□□□□□ -0.8
PTCH1-207ENST00000429896 TRAV9-2A0A087WT02 112 aa10.08□□□□□ -0.8
PTCH1-207ENST00000429896 A0A087WW49 117 aa10.08□□□□□ -0.8
PTCH1-207ENST00000429896 AMN1Q8IY45 258 aa10.08□□□□□ -0.8
PTCH1-207ENST00000429896 GAGE12BA1L429 117 aa10.08□□□□□ -0.8
PTCH1-207ENST00000429896 GAGE7O76087 117 aa10.08□□□□□ -0.8
PTCH1-207ENST00000429896 GAGE12FP0CL80 117 aa10.08□□□□□ -0.8
PTCH1-207ENST00000429896 GAGE12GP0CL81 117 aa10.08□□□□□ -0.8
PTCH1-207ENST00000429896 GAGE12IP0CL82 117 aa10.08□□□□□ -0.8
PTCH1-207ENST00000429896 NDUFA11Q86Y39 141 aa10.08□□□□□ -0.8
PTCH1-207ENST00000429896 TRAV26-2A0A0B4J265 109 aa10.07□□□□□ -0.8
PTCH1-207ENST00000429896 TEX22C9J3V5 150 aa10.07□□□□□ -0.8
PTCH1-207ENST00000429896 OSTCQ9NRP0 149 aa10.07□□□□□ -0.8
PTCH1-207ENST00000429896 ARHGAP21Q5T5U3 1957 aa10.07□□□□□ -0.8
PTCH1-207ENST00000429896 NXPH4O95158 308 aa10.07□□□□□ -0.8
PTCH1-207ENST00000429896 TNFRSF6BO95407 300 aa10.07□□□□□ -0.8
PTCH1-207ENST00000429896 ESDP10768 282 aa10.07□□□□□ -0.8
PTCH1-207ENST00000429896 NUP35Q8NFH5 326 aa10.07□□□□□ -0.8
PTCH1-207ENST00000429896 I3L2K1 104 aa10.07□□□□□ -0.8
PTCH1-207ENST00000429896 LY6LH3BQJ8 138 aa10.07□□□□□ -0.8
PTCH1-207ENST00000429896 DAD1P61803 113 aa10.07□□□□□ -0.8
PTCH1-207ENST00000429896 SS18Q15532 418 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms