RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 LINC01559Q495D7 138 aa16.45■□□□□ 0.22
CNEP1R1-202ENST00000427478 GATD1Q8NB37 220 aa16.45■□□□□ 0.22
CNEP1R1-202ENST00000427478 YAE1D1Q9NRH1 226 aa16.45■□□□□ 0.22
CNEP1R1-202ENST00000427478 PPP1R14DQ9NXH3 145 aa16.45■□□□□ 0.22
CNEP1R1-202ENST00000427478 CD5LO43866 347 aa16.45■□□□□ 0.22
CNEP1R1-202ENST00000427478 IGLC6P0CF74 106 aa16.45■□□□□ 0.22
CNEP1R1-202ENST00000427478 HOXD3P31249 432 aaPredicted RBP16.45■□□□□ 0.22
CNEP1R1-202ENST00000427478 S100A12P80511 92 aa16.45■□□□□ 0.22
CNEP1R1-202ENST00000427478 DNLZQ5SXM8 178 aa16.45■□□□□ 0.22
CNEP1R1-202ENST00000427478 C18orf65Q6ZTR6 163 aa16.45■□□□□ 0.22
CNEP1R1-202ENST00000427478 Q6ZWC4 215 aa16.45■□□□□ 0.22
CNEP1R1-202ENST00000427478 F6UB75 175 aa16.44■□□□□ 0.22
CNEP1R1-202ENST00000427478 CTRLP40313 264 aa16.44■□□□□ 0.22
CNEP1R1-202ENST00000427478 AMTP48728 403 aa16.44■□□□□ 0.22
CNEP1R1-202ENST00000427478 HIST1H1AQ02539 215 aaPredicted RBP16.44■□□□□ 0.22
CNEP1R1-202ENST00000427478 REC114Q7Z4M0 266 aa16.44■□□□□ 0.22
CNEP1R1-202ENST00000427478 TLN2Q9Y4G6 2542 aa16.44■□□□□ 0.22
CNEP1R1-202ENST00000427478 GPX1P07203 203 aa16.43■□□□□ 0.22
CNEP1R1-202ENST00000427478 WFDC3Q8IUB2 231 aa16.43■□□□□ 0.22
CNEP1R1-202ENST00000427478 C11orf21Q9P2W6 132 aa16.43■□□□□ 0.22
CNEP1R1-202ENST00000427478 CD33P20138 364 aa16.43■□□□□ 0.22
CNEP1R1-202ENST00000427478 DEFB136Q30KP8 78 aa16.43■□□□□ 0.22
CNEP1R1-202ENST00000427478 PRR9Q5T870 116 aa16.43■□□□□ 0.22
CNEP1R1-202ENST00000427478 LINC00477Q96M19 166 aa16.43■□□□□ 0.22
CNEP1R1-202ENST00000427478 IGKV3D-20A0A0C4DH25 116 aa16.42■□□□□ 0.22
CNEP1R1-202ENST00000427478 J3KRW8 73 aa16.42■□□□□ 0.22
CNEP1R1-202ENST00000427478 ZNF324O75467 553 aaPredicted RBP16.42■□□□□ 0.22
CNEP1R1-202ENST00000427478 Q6ZQT7 251 aa16.42■□□□□ 0.22
CNEP1R1-202ENST00000427478 DCANP1Q8TF63 244 aa16.42■□□□□ 0.22
CNEP1R1-202ENST00000427478 RNASEKQ6P5S7 137 aaKnown RBP16.42■□□□□ 0.22
CNEP1R1-202ENST00000427478 Q6ZSV7 163 aa16.42■□□□□ 0.22
CNEP1R1-202ENST00000427478 FAM19A2Q8N3H0 131 aa16.42■□□□□ 0.22
CNEP1R1-202ENST00000427478 OR8A1Q8NGG7 326 aa16.42■□□□□ 0.22
CNEP1R1-202ENST00000427478 ESM1Q9NQ30 184 aa16.42■□□□□ 0.22
CNEP1R1-202ENST00000427478 LENEPQ9Y5L5 61 aa16.42■□□□□ 0.22
CNEP1R1-202ENST00000427478 LGALS9O00182 355 aa16.41■□□□□ 0.22
CNEP1R1-202ENST00000427478 SCGB1D1O95968 90 aa16.4■□□□□ 0.22
CNEP1R1-202ENST00000427478 TFPI2P48307 235 aa16.4■□□□□ 0.22
CNEP1R1-202ENST00000427478 ZNF493Q6ZR52 646 aa16.4■□□□□ 0.22
CNEP1R1-202ENST00000427478 M0QZ24 198 aa16.4■□□□□ 0.22
CNEP1R1-202ENST00000427478 NTF3P20783 257 aa16.4■□□□□ 0.22
CNEP1R1-202ENST00000427478 ID1P41134 155 aa16.4■□□□□ 0.22
CNEP1R1-202ENST00000427478 TWIST1Q15672 202 aa16.4■□□□□ 0.22
CNEP1R1-202ENST00000427478 KHDC1LQ5JSQ8 128 aa16.4■□□□□ 0.22
CNEP1R1-202ENST00000427478 MS4A6AQ9H2W1 248 aa16.4■□□□□ 0.22
CNEP1R1-202ENST00000427478 HSBP1O75506 76 aa16.39■□□□□ 0.21
CNEP1R1-202ENST00000427478 SLURP1P55000 103 aa16.39■□□□□ 0.21
CNEP1R1-202ENST00000427478 TCTEX1D4Q5JR98 221 aa16.39■□□□□ 0.21
CNEP1R1-202ENST00000427478 URB1-AS1Q96HZ7 61 aa16.39■□□□□ 0.21
CNEP1R1-202ENST00000427478 RNF114Q9Y508 228 aa16.39■□□□□ 0.21
CNEP1R1-202ENST00000427478 SONP18583 2426 aaKnown RBP16.39■□□□□ 0.21
CNEP1R1-202ENST00000427478 NIT1Q86X76 327 aa16.39■□□□□ 0.21
CNEP1R1-202ENST00000427478 ZFAND2AQ8N6M9 145 aa16.39■□□□□ 0.21
CNEP1R1-202ENST00000427478 ITPR2Q14571 2701 aa16.38■□□□□ 0.21
CNEP1R1-202ENST00000427478 SAMD13Q5VXD3 122 aa16.38■□□□□ 0.21
CNEP1R1-202ENST00000427478 HIST2H2BDQ6DRA6 164 aa16.38■□□□□ 0.21
CNEP1R1-202ENST00000427478 C2orf70A6NJV1 201 aa16.37■□□□□ 0.21
CNEP1R1-202ENST00000427478 AMN1Q8IY45 258 aa16.37■□□□□ 0.21
CNEP1R1-202ENST00000427478 NAGKQ9UJ70 344 aa16.37■□□□□ 0.21
CNEP1R1-202ENST00000427478 AKAP9Q99996 3911 aa16.36■□□□□ 0.21
CNEP1R1-202ENST00000427478 FAM19A4Q96LR4 140 aa16.36■□□□□ 0.21
CNEP1R1-202ENST00000427478 MSRB1Q9NZV6 116 aa16.36■□□□□ 0.21
CNEP1R1-202ENST00000427478 UNC79Q9P2D8 2635 aa16.36■□□□□ 0.21
CNEP1R1-202ENST00000427478 ZNF688P0C7X2 276 aa16.36■□□□□ 0.21
CNEP1R1-202ENST00000427478 FAM104BQ5XKR9 115 aa16.36■□□□□ 0.21
CNEP1R1-202ENST00000427478 C4orf3Q8WVX3 66 aa16.36■□□□□ 0.21
CNEP1R1-202ENST00000427478 DUX3Q96PT4 197 aa16.36■□□□□ 0.21
CNEP1R1-202ENST00000427478 CNFNQ9BYD5 112 aa16.36■□□□□ 0.21
CNEP1R1-202ENST00000427478 KRTDAPP60985 99 aa16.35■□□□□ 0.21
CNEP1R1-202ENST00000427478 OR11H1Q8NG94 326 aa16.35■□□□□ 0.21
CNEP1R1-202ENST00000427478 GCN1Q92616 2671 aaKnown RBP16.35■□□□□ 0.21
CNEP1R1-202ENST00000427478 LINC00587B1AMM8 73 aa16.34■□□□□ 0.21
CNEP1R1-202ENST00000427478 LINC01619G3V211 115 aa16.34■□□□□ 0.21
CNEP1R1-202ENST00000427478 M0R2Z0 102 aa16.34■□□□□ 0.21
CNEP1R1-202ENST00000427478 PSMG4Q5JS54 123 aa16.34■□□□□ 0.21
CNEP1R1-202ENST00000427478 KLHL30-AS1Q8NEE0 82 aa16.34■□□□□ 0.21
CNEP1R1-202ENST00000427478 PRO1933Q9H354 126 aa16.34■□□□□ 0.21
CNEP1R1-202ENST00000427478 CUBNO60494 3623 aa16.34■□□□□ 0.21
CNEP1R1-202ENST00000427478 D6R8Y8 96 aa16.33■□□□□ 0.21
CNEP1R1-202ENST00000427478 K7EQG2 157 aa16.33■□□□□ 0.21
CNEP1R1-202ENST00000427478 CSN3P07498 182 aa16.33■□□□□ 0.21
CNEP1R1-202ENST00000427478 KIR3DS1Q14943 382 aa16.33■□□□□ 0.21
CNEP1R1-202ENST00000427478 DPF1Q92782 380 aa16.33■□□□□ 0.21
CNEP1R1-202ENST00000427478 TRAV21A0A0B4J279 112 aa16.33■□□□□ 0.2
CNEP1R1-202ENST00000427478 RNASE4P34096 147 aaKnown RBP16.33■□□□□ 0.2
CNEP1R1-202ENST00000427478 ADAMTSL5Q6ZMM2 481 aa16.33■□□□□ 0.2
CNEP1R1-202ENST00000427478 PMCHL1Q16048 86 aa16.32■□□□□ 0.2
CNEP1R1-202ENST00000427478 MRPL51Q4U2R6 128 aaKnown RBP16.32■□□□□ 0.2
CNEP1R1-202ENST00000427478 CHCHD1Q96BP2 118 aaKnown RBP16.32■□□□□ 0.2
CNEP1R1-202ENST00000427478 LINC00614P0C842 121 aa16.31■□□□□ 0.2
CNEP1R1-202ENST00000427478 SNRPD3P62318 126 aaKnown RBP16.31■□□□□ 0.2
CNEP1R1-202ENST00000427478 OR1N2Q8NGR9 330 aa16.31■□□□□ 0.2
CNEP1R1-202ENST00000427478 OR10AG1Q8NH19 301 aa16.31■□□□□ 0.2
CNEP1R1-202ENST00000427478 TMEM191AQ9H0A3 160 aa16.31■□□□□ 0.2
CNEP1R1-202ENST00000427478 APRG1Q8IVJ8 170 aa16.31■□□□□ 0.2
CNEP1R1-202ENST00000427478 TRBV7-9A0A0J9YWB2 115 aa16.3■□□□□ 0.2
CNEP1R1-202ENST00000427478 PKIAP61925 76 aa16.3■□□□□ 0.2
CNEP1R1-202ENST00000427478 ZNF664Q8N3J9 261 aa16.3■□□□□ 0.2
CNEP1R1-202ENST00000427478 SMR3AQ99954 134 aa16.3■□□□□ 0.2
CNEP1R1-202ENST00000427478 H3BVH4 76 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms