RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 HTN3P15516 51 aa12.16□□□□□ -0.46
LMCD1-204ENST00000426878 ATP5G3P48201 142 aa12.16□□□□□ -0.46
LMCD1-204ENST00000426878 Q6AWC8 147 aa12.16□□□□□ -0.46
LMCD1-204ENST00000426878 IGHV1OR15-1A0A075B7D0 117 aa12.15□□□□□ -0.46
LMCD1-204ENST00000426878 GGTLC3B5MD39 225 aa12.15□□□□□ -0.46
LMCD1-204ENST00000426878 BCL2L11O43521 198 aa12.15□□□□□ -0.46
LMCD1-204ENST00000426878 TCRAP04437 139 aa12.15□□□□□ -0.46
LMCD1-204ENST00000426878 SEC11BP0C7V7 166 aa12.15□□□□□ -0.46
LMCD1-204ENST00000426878 SUMO1P63165 101 aaKnown RBP12.15□□□□□ -0.46
LMCD1-204ENST00000426878 GNG5P63218 68 aa12.15□□□□□ -0.46
LMCD1-204ENST00000426878 IBA57Q5T440 356 aaKnown RBP12.15□□□□□ -0.46
LMCD1-204ENST00000426878 RPH3ALQ9UNE2 315 aa12.15□□□□□ -0.46
LMCD1-204ENST00000426878 RGS13O14921 159 aa12.14□□□□□ -0.47
LMCD1-204ENST00000426878 TMEM88Q6PEY1 159 aa12.14□□□□□ -0.47
LMCD1-204ENST00000426878 Q6ZQT7 251 aa12.14□□□□□ -0.47
LMCD1-204ENST00000426878 TCTE3Q8IZS6 198 aa12.14□□□□□ -0.47
LMCD1-204ENST00000426878 GSN-AS1Q9NRJ2 163 aa12.14□□□□□ -0.47
LMCD1-204ENST00000426878 EPDR1Q9UM22 224 aa12.14□□□□□ -0.47
LMCD1-204ENST00000426878 TRAV8-1A0A0A6YYK1 113 aa12.13□□□□□ -0.47
LMCD1-204ENST00000426878 KANTRA0A1W2PQU2 76 aa12.13□□□□□ -0.47
LMCD1-204ENST00000426878 P0DMU3 169 aa12.13□□□□□ -0.47
LMCD1-204ENST00000426878 FAM231AP0DMU4 169 aa12.13□□□□□ -0.47
LMCD1-204ENST00000426878 FAM231CP0DMU5 169 aa12.13□□□□□ -0.47
LMCD1-204ENST00000426878 TVP23CQ96ET8 276 aa12.13□□□□□ -0.47
LMCD1-204ENST00000426878 NKX6-2Q9C056 277 aaPredicted RBP12.13□□□□□ -0.47
LMCD1-204ENST00000426878 UMAD1C9J7I0 102 aa12.12□□□□□ -0.47
LMCD1-204ENST00000426878 K7EQM0 130 aa12.12□□□□□ -0.47
LMCD1-204ENST00000426878 TCL1AP56279 114 aa12.12□□□□□ -0.47
LMCD1-204ENST00000426878 EIF5AP63241 154 aaKnown RBP12.12□□□□□ -0.47
LMCD1-204ENST00000426878 IQCF2Q8IXL9 164 aa12.12□□□□□ -0.47
LMCD1-204ENST00000426878 C15orf53Q8NAA6 179 aa12.12□□□□□ -0.47
LMCD1-204ENST00000426878 C18orf15Q96N68 181 aa12.12□□□□□ -0.47
LMCD1-204ENST00000426878 ZNF471Q9BX82 626 aaPredicted RBP12.12□□□□□ -0.47
LMCD1-204ENST00000426878 TMPRSS5Q9H3S3 457 aa12.12□□□□□ -0.47
LMCD1-204ENST00000426878 MAP1LC3B2A6NCE7 125 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 FBLL1A6NHQ2 334 aaKnown RBP12.11□□□□□ -0.47
LMCD1-204ENST00000426878 F5H768 121 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 TDRG1Q3Y452 100 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 TMUB2Q71RG4 321 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 CYB561D1Q8N8Q1 229 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 ATG101Q9BSB4 218 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 MAP1LC3BQ9GZQ8 125 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 TREM1Q9NP99 234 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 TP53TG3Q9ULZ0 132 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 GAGE12BA1L429 117 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 SPINK4O60575 86 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 GAGE7O76087 117 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 IGLV2-11P01706 119 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 GAGE12FP0CL80 117 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 GAGE12GP0CL81 117 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 GAGE12IP0CL82 117 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 FGF8P55075 233 aaPredicted RBP12.11□□□□□ -0.47
LMCD1-204ENST00000426878 Q6ZTI0 123 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 POM121L12Q8N7R1 296 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 TMEM75Q8N9X5 138 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 STOML3Q8TAV4 291 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 NDFIP1Q9BT67 221 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 KLF12Q9Y4X4 402 aa12.11□□□□□ -0.47
LMCD1-204ENST00000426878 TRAV21A0A0B4J279 112 aa12.1□□□□□ -0.47
LMCD1-204ENST00000426878 FAM74A7A6NL05 159 aa12.1□□□□□ -0.47
LMCD1-204ENST00000426878 LGALS9BQ3B8N2 356 aa12.1□□□□□ -0.47
LMCD1-204ENST00000426878 FAM159AQ6UWV7 190 aa12.1□□□□□ -0.47
LMCD1-204ENST00000426878 DPPA3Q6W0C5 159 aa12.1□□□□□ -0.47
LMCD1-204ENST00000426878 MBD3L1Q8WWY6 194 aa12.1□□□□□ -0.47
LMCD1-204ENST00000426878 PSG8Q9UQ74 426 aa12.1□□□□□ -0.47
LMCD1-204ENST00000426878 PFDN1O60925 122 aa12.09□□□□□ -0.47
LMCD1-204ENST00000426878 TPT1P13693 172 aaKnown RBP12.09□□□□□ -0.47
LMCD1-204ENST00000426878 FHITP49789 147 aa12.09□□□□□ -0.47
LMCD1-204ENST00000426878 FLI1Q01543 452 aaPredicted RBP12.09□□□□□ -0.47
LMCD1-204ENST00000426878 ZNF415Q09FC8 603 aa12.09□□□□□ -0.47
LMCD1-204ENST00000426878 MUC21Q5SSG8 566 aa12.09□□□□□ -0.47
LMCD1-204ENST00000426878 ARL2-SNX15V9GYD0 113 aa12.09□□□□□ -0.47
LMCD1-204ENST00000426878 UBE2G2P60604 165 aa12.08□□□□□ -0.48
LMCD1-204ENST00000426878 LGALSLQ3ZCW2 172 aaPredicted RBP12.08□□□□□ -0.48
LMCD1-204ENST00000426878 RNF212Q495C1 297 aa12.08□□□□□ -0.48
LMCD1-204ENST00000426878 HIST1H2BAQ96A08 127 aa12.08□□□□□ -0.48
LMCD1-204ENST00000426878 SGK494Q96LW2 274 aa12.08□□□□□ -0.48
LMCD1-204ENST00000426878 TRGV11A0A075B6L2 103 aa12.07□□□□□ -0.48
LMCD1-204ENST00000426878 TRGV1A0A0A0MS02 117 aa12.07□□□□□ -0.48
LMCD1-204ENST00000426878 F6UZH7 168 aa12.07□□□□□ -0.48
LMCD1-204ENST00000426878 IFNA7P01567 189 aa12.07□□□□□ -0.48
LMCD1-204ENST00000426878 C1QBP02746 253 aa12.07□□□□□ -0.48
LMCD1-204ENST00000426878 SAPCD1Q5SSQ6 148 aa12.07□□□□□ -0.48
LMCD1-204ENST00000426878 TCEAL7Q9BRU2 100 aa12.07□□□□□ -0.48
LMCD1-204ENST00000426878 MDFICQ9P1T7 246 aa12.07□□□□□ -0.48
LMCD1-204ENST00000426878 DNAH10Q8IVF4 4471 aa12.06□□□□□ -0.48
LMCD1-204ENST00000426878 TRGV2A0A075B6R0 118 aa12.06□□□□□ -0.48
LMCD1-204ENST00000426878 H3BNG1 76 aa12.06□□□□□ -0.48
LMCD1-204ENST00000426878 HOXA5P20719 270 aa12.06□□□□□ -0.48
LMCD1-204ENST00000426878 FAM213BQ8TBF2 198 aa12.06□□□□□ -0.48
LMCD1-204ENST00000426878 SFT2D1Q8WV19 159 aa12.06□□□□□ -0.48
LMCD1-204ENST00000426878 KCNS1Q96KK3 526 aa12.06□□□□□ -0.48
LMCD1-204ENST00000426878 SPXQ9BT56 116 aa12.06□□□□□ -0.48
LMCD1-204ENST00000426878 MUC4Q99102 2169 aa12.06□□□□□ -0.48
LMCD1-204ENST00000426878 PEX7O00628 323 aa12.05□□□□□ -0.48
LMCD1-204ENST00000426878 PPT1P50897 306 aa12.05□□□□□ -0.48
LMCD1-204ENST00000426878 OR5I1Q13606 314 aa12.05□□□□□ -0.48
LMCD1-204ENST00000426878 TMEM183BQ1AE95 376 aa12.05□□□□□ -0.48
LMCD1-204ENST00000426878 PRNTQ86SH4 94 aa12.05□□□□□ -0.48
LMCD1-204ENST00000426878 TMEM183AQ8IXX5 376 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms