RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 FANCD2OSQ96PS1 177 aa9.02□□□□□ -0.97
PRPF40A-202ENST00000410080 RNF5Q99942 180 aa9.02□□□□□ -0.97
PRPF40A-202ENST00000410080 KLHDC3Q9BQ90 382 aa9.02□□□□□ -0.97
PRPF40A-202ENST00000410080 RS1O15537 224 aa9.02□□□□□ -0.97
PRPF40A-202ENST00000410080 LYPD3O95274 346 aa9.02□□□□□ -0.97
PRPF40A-202ENST00000410080 RNF126Q9BV68 326 aa9.02□□□□□ -0.97
PRPF40A-202ENST00000410080 IGKV1-12A0A0C4DH73 117 aa9.02□□□□□ -0.97
PRPF40A-202ENST00000410080 C5orf63A6NC05 138 aa9.02□□□□□ -0.97
PRPF40A-202ENST00000410080 LINC01559Q495D7 138 aa9.02□□□□□ -0.97
PRPF40A-202ENST00000410080 FAM120AOSQ5T036 256 aa9.02□□□□□ -0.97
PRPF40A-202ENST00000410080 APRG1Q8IVJ8 170 aa9.02□□□□□ -0.97
PRPF40A-202ENST00000410080 WFDC1Q9HC57 220 aa9.02□□□□□ -0.97
PRPF40A-202ENST00000410080 LINC00473A8K010 186 aa9.02□□□□□ -0.97
PRPF40A-202ENST00000410080 RSPO3Q9BXY4 272 aaPredicted RBP9.02□□□□□ -0.97
PRPF40A-202ENST00000410080 NTF4P34130 210 aa9.01□□□□□ -0.97
PRPF40A-202ENST00000410080 C9orf47Q6ZRZ4 202 aa9.01□□□□□ -0.97
PRPF40A-202ENST00000410080 HS3ST6Q96QI5 342 aa9.01□□□□□ -0.97
PRPF40A-202ENST00000410080 ZNF134P52741 427 aa9.01□□□□□ -0.97
PRPF40A-202ENST00000410080 SLAQ13239 276 aa9.01□□□□□ -0.97
PRPF40A-202ENST00000410080 PTPRBP23467 1997 aa9.01□□□□□ -0.97
PRPF40A-202ENST00000410080 CSPG4Q6UVK1 2322 aa9.01□□□□□ -0.97
PRPF40A-202ENST00000410080 C8orf31Q8N9H6 132 aa9.01□□□□□ -0.97
PRPF40A-202ENST00000410080 KIR3DS1Q14943 382 aa9.01□□□□□ -0.97
PRPF40A-202ENST00000410080 PIFOQ8TCI5 191 aa9.01□□□□□ -0.97
PRPF40A-202ENST00000410080 GP9P14770 177 aa9□□□□□ -0.97
PRPF40A-202ENST00000410080 LINC00479Q96M42 142 aa9□□□□□ -0.97
PRPF40A-202ENST00000410080 TMEM14BQ9NUH8 114 aa9□□□□□ -0.97
PRPF40A-202ENST00000410080 A0A1W2PPI3 338 aa9□□□□□ -0.97
PRPF40A-202ENST00000410080 IGLL5B9A064 214 aa9□□□□□ -0.97
PRPF40A-202ENST00000410080 TMEM75Q8N9X5 138 aa9□□□□□ -0.97
PRPF40A-202ENST00000410080 DEFB113Q30KQ7 82 aa9□□□□□ -0.97
PRPF40A-202ENST00000410080 Q6ZS92 163 aa9□□□□□ -0.97
PRPF40A-202ENST00000410080 ZNF581Q9P0T4 197 aa9□□□□□ -0.97
PRPF40A-202ENST00000410080 SHISA9B4DS77 424 aa9□□□□□ -0.97
PRPF40A-202ENST00000410080 SLURP1P55000 103 aa9□□□□□ -0.97
PRPF40A-202ENST00000410080 LYPD1Q8N2G4 141 aa8.99□□□□□ -0.97
PRPF40A-202ENST00000410080 STPG4Q8N801 248 aa8.99□□□□□ -0.97
PRPF40A-202ENST00000410080 GTSF1Q8WW33 167 aa8.99□□□□□ -0.97
PRPF40A-202ENST00000410080 GFI1Q99684 422 aa8.99□□□□□ -0.97
PRPF40A-202ENST00000410080 PTPRQQ9UMZ3 2332 aa8.99□□□□□ -0.97
PRPF40A-202ENST00000410080 GYPEP15421 78 aa8.99□□□□□ -0.97
PRPF40A-202ENST00000410080 RNF138Q8WVD3 245 aa8.99□□□□□ -0.97
PRPF40A-202ENST00000410080 IGHV4-59P01825 116 aa8.99□□□□□ -0.97
PRPF40A-202ENST00000410080 U3KQE9 123 aa8.99□□□□□ -0.97
PRPF40A-202ENST00000410080 RNF222A6NCQ9 220 aa8.99□□□□□ -0.97
PRPF40A-202ENST00000410080 TMEM213A2RRL7 107 aa8.98□□□□□ -0.97
PRPF40A-202ENST00000410080 NDUFB8O95169 186 aa8.98□□□□□ -0.97
PRPF40A-202ENST00000410080 MPV17L2Q567V2 206 aa8.98□□□□□ -0.97
PRPF40A-202ENST00000410080 PRSS57Q6UWY2 283 aa8.98□□□□□ -0.97
PRPF40A-202ENST00000410080 ICOSQ9Y6W8 199 aa8.98□□□□□ -0.97
PRPF40A-202ENST00000410080 TRAV13-2A0A0B4J235 113 aa8.98□□□□□ -0.97
PRPF40A-202ENST00000410080 CRIPAKQ8N1N5 446 aa8.98□□□□□ -0.97
PRPF40A-202ENST00000410080 TMEM141Q96I45 108 aa8.98□□□□□ -0.97
PRPF40A-202ENST00000410080 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.98□□□□□ -0.97
PRPF40A-202ENST00000410080 IGKV2-29A2NJV5 120 aaPredicted RBP8.98□□□□□ -0.97
PRPF40A-202ENST00000410080 TM2D2Q9BX73 214 aa8.98□□□□□ -0.97
PRPF40A-202ENST00000410080 DEFB4AO15263 64 aa8.98□□□□□ -0.97
PRPF40A-202ENST00000410080 RNF144BQ7Z419 303 aa8.98□□□□□ -0.97
PRPF40A-202ENST00000410080 VPREB3Q9UKI3 123 aa8.98□□□□□ -0.97
PRPF40A-202ENST00000410080 ZC2HC1BQ5TFG8 222 aa8.98□□□□□ -0.97
PRPF40A-202ENST00000410080 SRSF8Q9BRL6 282 aaKnown RBP8.98□□□□□ -0.97
PRPF40A-202ENST00000410080 NDUFB1O75438 58 aa8.97□□□□□ -0.97
PRPF40A-202ENST00000410080 ZNF362Q5T0B9 420 aaPredicted RBP8.97□□□□□ -0.97
PRPF40A-202ENST00000410080 CAMK2N2Q96S95 79 aa8.97□□□□□ -0.97
PRPF40A-202ENST00000410080 ZNF124Q15973 351 aa8.97□□□□□ -0.97
PRPF40A-202ENST00000410080 DEFB112Q30KQ8 113 aa8.97□□□□□ -0.97
PRPF40A-202ENST00000410080 FGF6P10767 208 aa8.97□□□□□ -0.97
PRPF40A-202ENST00000410080 HGFACQ04756 655 aa8.97□□□□□ -0.97
PRPF40A-202ENST00000410080 RHOHQ15669 191 aa8.97□□□□□ -0.97
PRPF40A-202ENST00000410080 DUX4L9Q6RFH8 374 aaPredicted RBP8.97□□□□□ -0.97
PRPF40A-202ENST00000410080 PFN1P07737 140 aaKnown RBP8.97□□□□□ -0.97
PRPF40A-202ENST00000410080 NRGNQ92686 78 aa8.97□□□□□ -0.97
PRPF40A-202ENST00000410080 FBLN5Q9UBX5 448 aa8.97□□□□□ -0.97
PRPF40A-202ENST00000410080 SYS1-DBNDD2H3BUS1 97 aa8.97□□□□□ -0.97
PRPF40A-202ENST00000410080 HOXB4P17483 251 aaPredicted RBP8.97□□□□□ -0.97
PRPF40A-202ENST00000410080 TMEM258P61165 79 aa8.97□□□□□ -0.97
PRPF40A-202ENST00000410080 Q6P435 159 aa8.97□□□□□ -0.97
PRPF40A-202ENST00000410080 HIST1H2BKO60814 126 aa8.96□□□□□ -0.97
PRPF40A-202ENST00000410080 HIST1H2BJP06899 126 aa8.96□□□□□ -0.97
PRPF40A-202ENST00000410080 HIST1H2BOP23527 126 aa8.96□□□□□ -0.97
PRPF40A-202ENST00000410080 HIST1H2BBP33778 126 aa8.96□□□□□ -0.97
PRPF40A-202ENST00000410080 BTCP35070 178 aa8.96□□□□□ -0.97
PRPF40A-202ENST00000410080 HIST1H2BDP58876 126 aa8.96□□□□□ -0.97
PRPF40A-202ENST00000410080 HIST1H2BCP62807 126 aa8.96□□□□□ -0.97
PRPF40A-202ENST00000410080 HIST2H2BEQ16778 126 aa8.96□□□□□ -0.97
PRPF40A-202ENST00000410080 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.96□□□□□ -0.97
PRPF40A-202ENST00000410080 ADAMTSL5Q6ZMM2 481 aa8.96□□□□□ -0.97
PRPF40A-202ENST00000410080 HIST1H2BHQ93079 126 aa8.96□□□□□ -0.97
PRPF40A-202ENST00000410080 HIST1H2BNQ99877 126 aa8.96□□□□□ -0.97
PRPF40A-202ENST00000410080 HIST1H2BMQ99879 126 aa8.96□□□□□ -0.97
PRPF40A-202ENST00000410080 NDUFA4O00483 81 aa8.96□□□□□ -0.97
PRPF40A-202ENST00000410080 WFDC9Q8NEX5 89 aa8.96□□□□□ -0.97
PRPF40A-202ENST00000410080 SHANK2-AS3Q9BTD1 123 aa8.96□□□□□ -0.97
PRPF40A-202ENST00000410080 J3QRE1 110 aa8.96□□□□□ -0.98
PRPF40A-202ENST00000410080 SPART-AS1P0CW21 52 aa8.96□□□□□ -0.98
PRPF40A-202ENST00000410080 HERVK_113P63121 156 aa8.96□□□□□ -0.98
PRPF40A-202ENST00000410080 CT83Q5H943 113 aa8.96□□□□□ -0.98
PRPF40A-202ENST00000410080 TMEM190Q8WZ59 177 aa8.96□□□□□ -0.98
PRPF40A-202ENST00000410080 SDHAF1A6NFY7 115 aa8.96□□□□□ -0.98
PRPF40A-202ENST00000410080 WISP1O95388 367 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms