RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 TSKUQ8WUA8 353 aa15.72■□□□□ 0.11
TPM1-208ENST00000404484 ASCL2Q99929 193 aa15.72■□□□□ 0.11
TPM1-208ENST00000404484 TMA7Q9Y2S6 64 aaKnown RBP15.72■□□□□ 0.11
TPM1-208ENST00000404484 NOTCH1P46531 2555 aa15.72■□□□□ 0.11
TPM1-208ENST00000404484 SMIM27A0A1W2PRY6 76 aa15.71■□□□□ 0.11
TPM1-208ENST00000404484 FAM3BP58499 235 aaPredicted RBP15.71■□□□□ 0.11
TPM1-208ENST00000404484 CD300EQ496F6 205 aaPredicted RBP15.7■□□□□ 0.1
TPM1-208ENST00000404484 EBLN2Q6P2I7 272 aa15.7■□□□□ 0.1
TPM1-208ENST00000404484 FAM231BA6NCW3 169 aa15.7■□□□□ 0.1
TPM1-208ENST00000404484 SH2D1AO60880 128 aa15.7■□□□□ 0.1
TPM1-208ENST00000404484 TYMSP04818 313 aa15.7■□□□□ 0.1
TPM1-208ENST00000404484 RPS10P46783 165 aaKnown RBP15.7■□□□□ 0.1
TPM1-208ENST00000404484 CRIP1P50238 77 aa15.7■□□□□ 0.1
TPM1-208ENST00000404484 OR2D3Q8NGH3 330 aa15.7■□□□□ 0.1
TPM1-208ENST00000404484 GFRA4Q9GZZ7 299 aa15.7■□□□□ 0.1
TPM1-208ENST00000404484 XKRY2A2RUG3 117 aa15.69■□□□□ 0.1
TPM1-208ENST00000404484 FABP5P3A8MUU1 101 aa15.69■□□□□ 0.1
TPM1-208ENST00000404484 DUSP14O95147 198 aaKnown RBP15.69■□□□□ 0.1
TPM1-208ENST00000404484 OR2K2Q8NGT1 345 aa15.69■□□□□ 0.1
TPM1-208ENST00000404484 NAT8BQ9UHF3 227 aa15.69■□□□□ 0.1
TPM1-208ENST00000404484 F6UB75 175 aa15.68■□□□□ 0.1
TPM1-208ENST00000404484 SAP30O75446 220 aa15.68■□□□□ 0.1
TPM1-208ENST00000404484 CA1P00915 261 aaPredicted RBP15.68■□□□□ 0.1
TPM1-208ENST00000404484 ZNF705DP0CH99 300 aaPredicted RBP15.68■□□□□ 0.1
TPM1-208ENST00000404484 ZNF705BP0CI00 300 aaPredicted RBP15.68■□□□□ 0.1
TPM1-208ENST00000404484 FOXI2Q6ZQN5 318 aa15.68■□□□□ 0.1
TPM1-208ENST00000404484 ODF3Q96PU9 254 aa15.68■□□□□ 0.1
TPM1-208ENST00000404484 SRD5A3Q9H8P0 318 aa15.68■□□□□ 0.1
TPM1-208ENST00000404484 TCL1AP56279 114 aa15.67■□□□□ 0.1
TPM1-208ENST00000404484 RPS20P60866 119 aaKnown RBP15.67■□□□□ 0.1
TPM1-208ENST00000404484 A0A0J9YX75 114 aa15.66■□□□□ 0.1
TPM1-208ENST00000404484 IZUMO1RA6ND01 250 aa15.66■□□□□ 0.1
TPM1-208ENST00000404484 C1orf196B1AJZ1 125 aa15.66■□□□□ 0.1
TPM1-208ENST00000404484 LINC00482Q8N8I6 264 aa15.66■□□□□ 0.1
TPM1-208ENST00000404484 NEU1Q99519 415 aa15.66■□□□□ 0.1
TPM1-208ENST00000404484 SAV1Q9H4B6 383 aaPredicted RBP15.66■□□□□ 0.1
TPM1-208ENST00000404484 TMEM189A5PLL7 270 aa15.66■□□□□ 0.1
TPM1-208ENST00000404484 CRISP2P16562 243 aa15.66■□□□□ 0.1
TPM1-208ENST00000404484 DEFB1P60022 68 aa15.66■□□□□ 0.1
TPM1-208ENST00000404484 FAM19A4Q96LR4 140 aa15.66■□□□□ 0.1
TPM1-208ENST00000404484 ZNF80P51504 273 aaPredicted RBP15.65■□□□□ 0.1
TPM1-208ENST00000404484 COX19Q49B96 90 aa15.65■□□□□ 0.1
TPM1-208ENST00000404484 Q6AWC8 147 aa15.65■□□□□ 0.1
TPM1-208ENST00000404484 HIGD1CA8MV81 97 aa15.64■□□□□ 0.09
TPM1-208ENST00000404484 LEPP41159 167 aa15.64■□□□□ 0.09
TPM1-208ENST00000404484 CMC4P56277 68 aaPredicted RBP15.64■□□□□ 0.09
TPM1-208ENST00000404484 RAB5BP61020 215 aa15.64■□□□□ 0.09
TPM1-208ENST00000404484 ZFAND2AQ8N6M9 145 aa15.64■□□□□ 0.09
TPM1-208ENST00000404484 IGLV1-51P01701 117 aa15.63■□□□□ 0.09
TPM1-208ENST00000404484 DEFB131AP59861 70 aa15.63■□□□□ 0.09
TPM1-208ENST00000404484 APRG1Q8IVJ8 170 aa15.63■□□□□ 0.09
TPM1-208ENST00000404484 NUP35Q8NFH5 326 aa15.63■□□□□ 0.09
TPM1-208ENST00000404484 ZNF256Q9Y2P7 627 aaPredicted RBP15.63■□□□□ 0.09
TPM1-208ENST00000404484 GPX1P07203 203 aa15.62■□□□□ 0.09
TPM1-208ENST00000404484 LINC01559Q495D7 138 aa15.62■□□□□ 0.09
TPM1-208ENST00000404484 RASL11AQ6T310 242 aa15.62■□□□□ 0.09
TPM1-208ENST00000404484 ATP5L2Q7Z4Y8 100 aa15.62■□□□□ 0.09
TPM1-208ENST00000404484 MAP6D1Q9H9H5 199 aa15.62■□□□□ 0.09
TPM1-208ENST00000404484 MEGF8Q7Z7M0 2845 aa15.62■□□□□ 0.09
TPM1-208ENST00000404484 TRAV21A0A0B4J279 112 aa15.62■□□□□ 0.09
TPM1-208ENST00000404484 ORM1P02763 201 aa15.62■□□□□ 0.09
TPM1-208ENST00000404484 TSPOP30536 169 aa15.62■□□□□ 0.09
TPM1-208ENST00000404484 FOXA3P55318 350 aaPredicted RBP15.62■□□□□ 0.09
TPM1-208ENST00000404484 GDF5OSQ5U4N7 250 aa15.62■□□□□ 0.09
TPM1-208ENST00000404484 CD33P20138 364 aa15.61■□□□□ 0.09
TPM1-208ENST00000404484 WDR73Q6P4I2 378 aa15.61■□□□□ 0.09
TPM1-208ENST00000404484 GTSF1Q8WW33 167 aa15.61■□□□□ 0.09
TPM1-208ENST00000404484 HLA-DRB4P13762 266 aa15.6■□□□□ 0.09
TPM1-208ENST00000404484 INSL3P51460 131 aa15.6■□□□□ 0.09
TPM1-208ENST00000404484 HLA-DRB4X5D2U9 266 aa15.6■□□□□ 0.09
TPM1-208ENST00000404484 KLLNB2CW77 178 aa15.59■□□□□ 0.09
TPM1-208ENST00000404484 MT-ND6P03923 174 aa15.59■□□□□ 0.09
TPM1-208ENST00000404484 BORCS7Q96B45 105 aa15.59■□□□□ 0.09
TPM1-208ENST00000404484 TRGC2P03986 189 aa15.58■□□□□ 0.09
TPM1-208ENST00000404484 GZMBP10144 247 aa15.58■□□□□ 0.09
TPM1-208ENST00000404484 PRR9Q5T870 116 aa15.58■□□□□ 0.09
TPM1-208ENST00000404484 MRPL54Q6P161 138 aaKnown RBP15.58■□□□□ 0.09
TPM1-208ENST00000404484 WFDC9Q8NEX5 89 aa15.58■□□□□ 0.09
TPM1-208ENST00000404484 PGLYRP4Q96LB8 373 aa15.58■□□□□ 0.09
TPM1-208ENST00000404484 TMSB15BA0A087X1C1 80 aa15.58■□□□□ 0.08
TPM1-208ENST00000404484 A8MTW9 85 aa15.58■□□□□ 0.08
TPM1-208ENST00000404484 OR11H12B2RN74 326 aa15.58■□□□□ 0.08
TPM1-208ENST00000404484 SPINK4O60575 86 aa15.58■□□□□ 0.08
TPM1-208ENST00000404484 RNASE4P34096 147 aaKnown RBP15.58■□□□□ 0.08
TPM1-208ENST00000404484 ACTL10Q5JWF8 245 aa15.58■□□□□ 0.08
TPM1-208ENST00000404484 GNB1LQ9BYB4 327 aa15.58■□□□□ 0.08
TPM1-208ENST00000404484 J3KRW8 73 aa15.57■□□□□ 0.08
TPM1-208ENST00000404484 C9orf66Q5T8R8 295 aa15.57■□□□□ 0.08
TPM1-208ENST00000404484 FAM110AQ9BQ89 295 aa15.57■□□□□ 0.08
TPM1-208ENST00000404484 TRAPPC1Q9Y5R8 145 aa15.57■□□□□ 0.08
TPM1-208ENST00000404484 KNCNA6PVL3 124 aa15.56■□□□□ 0.08
TPM1-208ENST00000404484 G3V4G9 280 aa15.56■□□□□ 0.08
TPM1-208ENST00000404484 H3BMM0 161 aa15.56■□□□□ 0.08
TPM1-208ENST00000404484 CDKN1BP46527 198 aa15.56■□□□□ 0.08
TPM1-208ENST00000404484 ODF3L2Q3SX64 289 aa15.56■□□□□ 0.08
TPM1-208ENST00000404484 CLUHP3Q96NS8 147 aa15.56■□□□□ 0.08
TPM1-208ENST00000404484 MCRIP2Q9BUT9 160 aaKnown RBP15.56■□□□□ 0.08
TPM1-208ENST00000404484 A0A1B0GUT8 65 aa15.55■□□□□ 0.08
TPM1-208ENST00000404484 A0A1B0GW15 77 aa15.55■□□□□ 0.08
TPM1-208ENST00000404484 C7orf71A4D174 169 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms