RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 IGLC2P0DOY2 106 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 IGLC3P0DOY3 106 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 LINC00310P59036 64 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 RPL32P62910 135 aaKnown RBP3.92□□□□□ -1.78
SMAD4-202ENST00000398417 CR1LQ2VPA4 569 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 KLK15Q9H2R5 256 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 TNRC6BQ9UPQ9 1833 aaKnown RBP3.92□□□□□ -1.78
SMAD4-202ENST00000398417 TRAV30A0A087WSZ9 112 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 KNCNA6PVL3 124 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 SMKR1H3BMG3 65 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 DLX6P56179 175 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 ZFAND6Q6FIF0 208 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 VMO1Q7Z5L0 202 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 ZNF418Q8TF45 676 aaPredicted RBP3.92□□□□□ -1.78
SMAD4-202ENST00000398417 A4D1N5 150 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 A6NDX4 124 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 GAGE12JA6NER3 117 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 GAGE4Q13068 117 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 GAGE5Q13069 117 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 GAGE6Q13070 117 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 LINC00322Q6ZN03 302 aaPredicted RBP3.92□□□□□ -1.78
SMAD4-202ENST00000398417 Q8N9W7 124 aa3.92□□□□□ -1.78
SMAD4-202ENST00000398417 IGLC7A0M8Q6 106 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 HTN3P15516 51 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 PSG9Q00887 426 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 PVRIGQ6DKI7 326 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 SHANK2-AS3Q9BTD1 123 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 FAM231DQ6ZW35 169 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 PKIGQ9Y2B9 76 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 C3orf36Q3SXR2 165 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 GLMPQ8WWB7 406 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 VKORC1Q9BQB6 163 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 NAA38Q9BRA0 125 aaKnown RBP3.91□□□□□ -1.78
SMAD4-202ENST00000398417 PIEZO1Q92508 2521 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 SYS1-DBNDD2H3BUS1 97 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 IGLC1P0CG04 106 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 LINC01587Q99440 93 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 TP73-AS1Q9UF72 201 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 A1L4Q6 167 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 NDUFS7O75251 213 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 IGLL1P15814 213 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 NKAPP1Q8N9T2 125 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 CHCHD5Q9BSY4 110 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 KIR2DL5BA0A0G2JN68 375 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 KIR2DL5BA0A0G2JPC4 375 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 FAM240AA0A1B0GVK7 77 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 H3BRN7 92 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 GP9P14770 177 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 TCF15Q12870 199 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 RASL11AQ6T310 242 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 KIR2DL5AQ8N109 375 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 TRBV19A0A075B6N1 114 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 SYT8Q8NBV8 401 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 C18orf15Q96N68 181 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 HIST1H4GQ99525 98 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 MRPL27Q9P0M9 148 aaKnown RBP3.91□□□□□ -1.78
SMAD4-202ENST00000398417 PHLDA3Q9Y5J5 127 aa3.91□□□□□ -1.78
SMAD4-202ENST00000398417 TEX22C9J3V5 150 aa3.9□□□□□ -1.78
SMAD4-202ENST00000398417 CRYGCP07315 174 aa3.9□□□□□ -1.78
SMAD4-202ENST00000398417 GAGE2EQ4V326 116 aa3.9□□□□□ -1.78
SMAD4-202ENST00000398417 GAGE2DQ9UEU5 116 aa3.9□□□□□ -1.78
SMAD4-202ENST00000398417 I3L2K1 104 aa3.9□□□□□ -1.78
SMAD4-202ENST00000398417 RBM3P98179 157 aaKnown RBP3.9□□□□□ -1.78
SMAD4-202ENST00000398417 LAGE3Q14657 143 aa3.9□□□□□ -1.78
SMAD4-202ENST00000398417 DEFB104AQ8WTQ1 72 aa3.9□□□□□ -1.78
SMAD4-202ENST00000398417 RPL35AP18077 110 aaKnown RBP3.9□□□□□ -1.78
SMAD4-202ENST00000398417 CDKN1BP46527 198 aa3.9□□□□□ -1.78
SMAD4-202ENST00000398417 BCL6BQ8N143 479 aaPredicted RBP3.9□□□□□ -1.78
SMAD4-202ENST00000398417 OR10J6PQ8NGY7 276 aa3.9□□□□□ -1.78
SMAD4-202ENST00000398417 PHLDA1Q8WV24 401 aaPredicted RBP3.9□□□□□ -1.78
SMAD4-202ENST00000398417 ZNF414Q96IQ9 312 aa3.9□□□□□ -1.78
SMAD4-202ENST00000398417 LTAP01374 205 aa3.9□□□□□ -1.79
SMAD4-202ENST00000398417 IGHV3-11P01762 117 aa3.9□□□□□ -1.79
SMAD4-202ENST00000398417 ZNF56Q15929 161 aa3.9□□□□□ -1.79
SMAD4-202ENST00000398417 MPV17L2Q567V2 206 aa3.9□□□□□ -1.79
SMAD4-202ENST00000398417 SLC25A16P16260 332 aa3.9□□□□□ -1.79
SMAD4-202ENST00000398417 PSG3Q16557 428 aa3.9□□□□□ -1.79
SMAD4-202ENST00000398417 WFDC12Q8WWY7 111 aa3.9□□□□□ -1.79
SMAD4-202ENST00000398417 JKAMPQ9P055 326 aa3.9□□□□□ -1.79
SMAD4-202ENST00000398417 PPBPP02775 128 aa3.9□□□□□ -1.79
SMAD4-202ENST00000398417 Q8NA96 180 aa3.9□□□□□ -1.79
SMAD4-202ENST00000398417 RAI1Q7Z5J4 1906 aaPredicted RBP3.9□□□□□ -1.79
SMAD4-202ENST00000398417 TRAV12-3A0A0B4J271 114 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 FER1L6-AS1Q8NA97 138 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 A0A1B0GUT8 65 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 SPRY2O43597 315 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 FBLN7Q53RD9 439 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 MEIG1Q5JSS6 88 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 AMN1Q8IY45 258 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 ZC2HC1AQ96GY0 325 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 IGHV1-24A0A0C4DH33 117 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 NPIPB5A8MRT5 1133 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 G3V4G9 280 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 FAM106CPP0CH98 169 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 ESDP10768 282 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 LY6DQ14210 128 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 DYNAPQ8N1N2 210 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 ZNF491Q8N8L2 437 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 RNF5Q99942 180 aa3.89□□□□□ -1.79
SMAD4-202ENST00000398417 D6R8Y8 96 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms