RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 ALKQ9UM73 1620 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 BIVM-ERCC5R4GMW8 1640 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 RTL9Q8NET4 1388 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 ZMYM4Q5VZL5 1548 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 TRBV27A0A0K0K1C4 114 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 C3orf85A0A1B0GTC6 90 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 PRORSD1PA6NEY8 169 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 NCR3O14931 201 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 FAM107AO95990 144 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 PPYP01298 95 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 TRACP01848 142 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 NBEAP1P0C6P0 100 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 MAXP61244 160 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 FOXI2Q6ZQN5 318 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 ZCCHC23Q6ZST2 131 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 AKAP14Q86UN6 197 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 LINC00269Q8N2A0 174 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 TMEM229BQ8NBD8 167 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 OR10AG1Q8NH19 301 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 BRK1Q8WUW1 75 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 SKA2Q8WVK7 121 aaPredicted RBP0.6□□□□□ -2.31
CD47-203ENST00000398258 CLEC2BQ92478 149 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 AMELYQ99218 206 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 NABP2Q9BQ15 211 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 CST11Q9H112 138 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 GINS2Q9Y248 185 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 SCAPERQ9BY12 1400 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 DIP2AQ14689 1571 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 SCN3AQ9NY46 2000 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 PRXQ9BXM0 1461 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 ARHGAP35Q9NRY4 1499 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 MLH3Q9UHC1 1453 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 MROH1Q8NDA8 1641 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 ADCY10Q96PN6 1610 aa0.6□□□□□ -2.31
CD47-203ENST00000398258 FREM3P0C091 2139 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 KIF13AQ9H1H9 1805 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 PBRM1Q86U86 1689 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 ADGBQ8N7X0 1667 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 PRDM15P57071 1507 aaPredicted RBP0.59□□□□□ -2.31
CD47-203ENST00000398258 ARHGAP5Q13017 1502 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 ERICH3Q5RHP9 1530 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 ASXL1Q8IXJ9 1541 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 PLXNA4Q9HCM2 1894 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 PHLPP1O60346 1717 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 UNC13AQ9UPW8 1703 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 ADAMTS12P58397 1594 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 TIAM1Q13009 1591 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 NRKQ7Z2Y5 1582 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 BCL9O00512 1426 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 MYOM3Q5VTT5 1437 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 ERBINQ96RT1 1412 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 RRBP1Q9P2E9 1410 aaKnown RBP0.59□□□□□ -2.31
CD47-203ENST00000398258 LOC107984640A0A0U1RRK4 108 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 JMJD7-PLA2G4BH0Y9G9 81 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 PRB3Q04118 309 aaPredicted RBP0.59□□□□□ -2.31
CD47-203ENST00000398258 HAGHLQ6PII5 290 aaPredicted RBP0.59□□□□□ -2.31
CD47-203ENST00000398258 TOMM20LQ6UXN7 152 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 OR5AK2Q8NH90 309 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 CCL4L1Q8NHW4 92 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 PSMF1Q92530 271 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 MCEEQ96PE7 176 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 LIMD2Q9BT23 127 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 CBLN4Q9NTU7 201 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 HSPB11Q9Y547 144 aa0.59□□□□□ -2.31
CD47-203ENST00000398258 SHROOM2Q13796 1616 aa0.59□□□□□ -2.32
CD47-203ENST00000398258 A2MP01023 1474 aa0.59□□□□□ -2.32
CD47-203ENST00000398258 MYOM2P54296 1465 aa0.59□□□□□ -2.32
CD47-203ENST00000398258 MYH10P35580 1976 aa0.59□□□□□ -2.32
CD47-203ENST00000398258 ZNF142P52746 1687 aaPredicted RBP0.59□□□□□ -2.32
CD47-203ENST00000398258 SHPRHQ149N8 1683 aa0.59□□□□□ -2.32
CD47-203ENST00000398258 ROBO1Q9Y6N7 1651 aa0.59□□□□□ -2.32
CD47-203ENST00000398258 ABCC1P33527 1531 aa0.59□□□□□ -2.32
CD47-203ENST00000398258 MAP3K1Q13233 1512 aa0.59□□□□□ -2.32
CD47-203ENST00000398258 ABCA10Q8WWZ4 1543 aa0.59□□□□□ -2.32
CD47-203ENST00000398258 UGGT2Q9NYU1 1516 aa0.59□□□□□ -2.32
CD47-203ENST00000398258 RGPD1P0DJD0 1748 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 PEAK1Q9H792 1746 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 CEP162Q5TB80 1403 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 DEPDC5O75140 1603 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 LRP6O75581 1613 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 ABCA5Q8WWZ7 1642 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.58□□□□□ -2.32
CD47-203ENST00000398258 IGLV3-32A0A0A0MS00 114 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.58□□□□□ -2.32
CD47-203ENST00000398258 MT-ND4LP03901 98 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 SLC25A4P12235 298 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 CRYGSP22914 178 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 CMPK1P30085 196 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 SDC4P31431 198 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 EFNA4P52798 201 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 FXYD4P59646 89 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 BLCAPP62952 87 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 NEDD8Q15843 81 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 C5orf17Q8NAS9 161 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 PLPP5Q8NEB5 264 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 NCOA2Q15596 1464 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 E9PCH4 1651 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 TOP2AP11388 1531 aaKnown RBP0.58□□□□□ -2.32
CD47-203ENST00000398258 SYCP2Q9BX26 1530 aa0.58□□□□□ -2.32
CD47-203ENST00000398258 CNTRLQ7Z7A1 2325 aa0.58□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms