RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 SEM1Q6ZVN7 128 aa4.34□□□□□ -1.71
PTPRD-205ENST00000397611 UBE2WQ96B02 151 aa4.34□□□□□ -1.71
PTPRD-205ENST00000397611 C21orf62Q9NYP8 219 aa4.34□□□□□ -1.71
PTPRD-205ENST00000397611 LTAP01374 205 aa4.34□□□□□ -1.72
PTPRD-205ENST00000397611 HIST1H4AP62805 103 aaKnown RBP4.34□□□□□ -1.72
PTPRD-205ENST00000397611 TMEM133Q9H2Q1 129 aa4.34□□□□□ -1.72
PTPRD-205ENST00000397611 IGKV1D-37A0A075B6S9 117 aa4.34□□□□□ -1.72
PTPRD-205ENST00000397611 IGKV1-16P04430 117 aa4.34□□□□□ -1.72
PTPRD-205ENST00000397611 CD3EP07766 207 aa4.34□□□□□ -1.72
PTPRD-205ENST00000397611 SLC25A16P16260 332 aa4.34□□□□□ -1.72
PTPRD-205ENST00000397611 ATP1A1-AS1Q5TC04 95 aa4.34□□□□□ -1.72
PTPRD-205ENST00000397611 GAGE2AQ6NT46 116 aa4.34□□□□□ -1.72
PTPRD-205ENST00000397611 ZNF493Q6ZR52 646 aa4.34□□□□□ -1.72
PTPRD-205ENST00000397611 ZNF747Q9BV97 191 aa4.34□□□□□ -1.72
PTPRD-205ENST00000397611 NAV2Q8IVL1 2488 aa4.34□□□□□ -1.72
PTPRD-205ENST00000397611 SIVA1O15304 175 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 NPYP01303 97 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 RNASE6Q93091 150 aaKnown RBP4.33□□□□□ -1.72
PTPRD-205ENST00000397611 LOXP28300 417 aaPredicted RBP4.33□□□□□ -1.72
PTPRD-205ENST00000397611 C3orf56Q8N813 242 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 B9A039 149 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 NPFFO15130 113 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 HLA-DRB4P13762 266 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 WFDC2Q14508 124 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 FAM104BQ5XKR9 115 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 C8orf86Q6ZUL3 223 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 HLA-DRB4X5D2U9 266 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 A0A0C4DFX4 3053 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 MYMXA0A1B0GTQ4 84 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 UBE2L6O14933 153 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 FCN3O75636 299 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 CCDC144NLQ6NUI1 221 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 OR11H6Q8NGC7 330 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 TTTY13Q9BZ97 58 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 HAX1O00165 279 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 TRAV26-2A0A0B4J265 109 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 A0A1W2PPI3 338 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 TMEM178BH3BS89 294 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 LINC01545Q5VT33 79 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 RNF182Q8N6D2 247 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 CLUHP3Q96NS8 147 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 YAE1D1Q9NRH1 226 aa4.33□□□□□ -1.72
PTPRD-205ENST00000397611 TRBV7-9A0A0J9YWB2 115 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 RRN3P1Q2M238 152 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 MRPL51Q4U2R6 128 aaKnown RBP4.32□□□□□ -1.72
PTPRD-205ENST00000397611 C15orf53Q8NAA6 179 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 CNFNQ9BYD5 112 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 IGKV1-17P01599 117 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 CD28P10747 220 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 PMVKQ15126 192 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 NTN5Q8WTR8 489 aaPredicted RBP4.32□□□□□ -1.72
PTPRD-205ENST00000397611 TMEM101Q96IK0 257 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 SHANK2-AS3Q9BTD1 123 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 MRPL35Q9NZE8 188 aaKnown RBP4.32□□□□□ -1.72
PTPRD-205ENST00000397611 NDUFS7O75251 213 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 CLEC19AQ6UXS0 136 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 RNF183Q96D59 192 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 AKAP6Q13023 2319 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 CHD8Q9HCK8 2581 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 IGHV3OR16-12A0A075B7B8 117 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 TRAV21A0A0B4J279 112 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 SLC25A20O43772 301 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 FXYD2P54710 66 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 EEF1AKMT3Q96AZ1 226 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 UTRNP46939 3433 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 CRYGBP07316 175 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 SRSF2Q01130 221 aaKnown RBP4.32□□□□□ -1.72
PTPRD-205ENST00000397611 TNFRSF18Q9Y5U5 241 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 IGHV1-8P0DP01 117 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 HERV-K104P63124 156 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 CFAP161Q6P656 301 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 SIGLEC9Q9Y336 463 aa4.32□□□□□ -1.72
PTPRD-205ENST00000397611 PRSS29PA6NIE9 313 aa4.31□□□□□ -1.72
PTPRD-205ENST00000397611 FAM106CPP0CH98 169 aa4.31□□□□□ -1.72
PTPRD-205ENST00000397611 ERCC8Q13216 396 aa4.31□□□□□ -1.72
PTPRD-205ENST00000397611 Q8N8P6 123 aa4.31□□□□□ -1.72
PTPRD-205ENST00000397611 TMEM75Q8N9X5 138 aa4.31□□□□□ -1.72
PTPRD-205ENST00000397611 ZNRD1Q9P1U0 126 aa4.31□□□□□ -1.72
PTPRD-205ENST00000397611 LENEPQ9Y5L5 61 aa4.31□□□□□ -1.72
PTPRD-205ENST00000397611 TRBV19A0A075B6N1 114 aa4.31□□□□□ -1.72
PTPRD-205ENST00000397611 TAL2Q16559 108 aa4.31□□□□□ -1.72
PTPRD-205ENST00000397611 IGLV2-23P01705 113 aa4.31□□□□□ -1.72
PTPRD-205ENST00000397611 PF4V1P10720 104 aa4.31□□□□□ -1.72
PTPRD-205ENST00000397611 C14orf178Q8N769 122 aaPredicted RBP4.31□□□□□ -1.72
PTPRD-205ENST00000397611 RNF114Q9Y508 228 aa4.31□□□□□ -1.72
PTPRD-205ENST00000397611 CEP192Q8TEP8 1941 aa4.31□□□□□ -1.72
PTPRD-205ENST00000397611 EBI3Q14213 229 aa4.31□□□□□ -1.72
PTPRD-205ENST00000397611 VWC2LB2RUY7 222 aa4.3□□□□□ -1.72
PTPRD-205ENST00000397611 MRPL23Q16540 153 aaKnown RBP4.3□□□□□ -1.72
PTPRD-205ENST00000397611 PRADC1Q9BSG0 188 aa4.3□□□□□ -1.72
PTPRD-205ENST00000397611 SLC50A1Q9BRV3 221 aa4.3□□□□□ -1.72
PTPRD-205ENST00000397611 TOMM7Q9P0U1 55 aa4.3□□□□□ -1.72
PTPRD-205ENST00000397611 DPM3Q9P2X0 92 aa4.3□□□□□ -1.72
PTPRD-205ENST00000397611 FOXI1Q12951 378 aa4.3□□□□□ -1.72
PTPRD-205ENST00000397611 FAM120AOSQ5T036 256 aa4.3□□□□□ -1.72
PTPRD-205ENST00000397611 CNTFRP26992 372 aa4.3□□□□□ -1.72
PTPRD-205ENST00000397611 MORN5Q5VZ52 161 aa4.3□□□□□ -1.72
PTPRD-205ENST00000397611 FOXI2Q6ZQN5 318 aa4.3□□□□□ -1.72
PTPRD-205ENST00000397611 SPANXA1Q9NS26 97 aa4.3□□□□□ -1.72
PTPRD-205ENST00000397611 NCKAP5O14513 1909 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms