RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 PRR25Q96S07 402 aa18.67■□□□□ 0.58
CSNK1E-203ENST00000396832 ATP5G2Q06055 141 aa18.67■□□□□ 0.58
CSNK1E-203ENST00000396832 NXT2Q9NPJ8 142 aaKnown RBP18.67■□□□□ 0.58
CSNK1E-203ENST00000396832 IGLC6P0CF74 106 aa18.66■□□□□ 0.58
CSNK1E-203ENST00000396832 LINC01560Q8TB33 94 aa18.66■□□□□ 0.58
CSNK1E-203ENST00000396832 AGRNO00468 2067 aa18.66■□□□□ 0.58
CSNK1E-203ENST00000396832 GATA1P15976 413 aaPredicted RBP18.65■□□□□ 0.58
CSNK1E-203ENST00000396832 ZNF575Q86XF7 245 aa18.65■□□□□ 0.58
CSNK1E-203ENST00000396832 ATP5LO75964 103 aa18.65■□□□□ 0.58
CSNK1E-203ENST00000396832 PDE6HQ13956 83 aa18.65■□□□□ 0.58
CSNK1E-203ENST00000396832 ATRXP46100 2492 aa18.65■□□□□ 0.58
CSNK1E-203ENST00000396832 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.64■□□□□ 0.57
CSNK1E-203ENST00000396832 ZNF502Q8TBZ5 544 aa18.64■□□□□ 0.57
CSNK1E-203ENST00000396832 HIST1H4GQ99525 98 aa18.64■□□□□ 0.57
CSNK1E-203ENST00000396832 MRPL35Q9NZE8 188 aaKnown RBP18.64■□□□□ 0.57
CSNK1E-203ENST00000396832 NCBP2LA6PVI3 153 aaKnown RBP18.63■□□□□ 0.57
CSNK1E-203ENST00000396832 COX8CQ7Z4L0 72 aa18.63■□□□□ 0.57
CSNK1E-203ENST00000396832 PRO0461Q9UI25 63 aa18.63■□□□□ 0.57
CSNK1E-203ENST00000396832 ORM1P02763 201 aa18.63■□□□□ 0.57
CSNK1E-203ENST00000396832 HLA-DRB4P13762 266 aa18.63■□□□□ 0.57
CSNK1E-203ENST00000396832 SCGB2A2Q13296 93 aa18.63■□□□□ 0.57
CSNK1E-203ENST00000396832 TTC9CQ8N5M4 171 aa18.63■□□□□ 0.57
CSNK1E-203ENST00000396832 HLA-DRB4X5D2U9 266 aa18.63■□□□□ 0.57
CSNK1E-203ENST00000396832 IGHV3OR16-13A0A075B7E8 117 aa18.62■□□□□ 0.57
CSNK1E-203ENST00000396832 IGHV3-74A0A0B4J1X5 117 aa18.62■□□□□ 0.57
CSNK1E-203ENST00000396832 IGHV3-66A0A0C4DH42 116 aa18.62■□□□□ 0.57
CSNK1E-203ENST00000396832 GRNP28799 593 aaKnown RBP18.62■□□□□ 0.57
CSNK1E-203ENST00000396832 NDPQ00604 133 aa18.62■□□□□ 0.57
CSNK1E-203ENST00000396832 TAL2Q16559 108 aa18.62■□□□□ 0.57
CSNK1E-203ENST00000396832 NBR2O15453 112 aa18.62■□□□□ 0.57
CSNK1E-203ENST00000396832 RRN3P1Q2M238 152 aa18.61■□□□□ 0.57
CSNK1E-203ENST00000396832 TCTEX1D4Q5JR98 221 aa18.61■□□□□ 0.57
CSNK1E-203ENST00000396832 ERCC8Q13216 396 aa18.61■□□□□ 0.57
CSNK1E-203ENST00000396832 WFDC12Q8WWY7 111 aa18.61■□□□□ 0.57
CSNK1E-203ENST00000396832 TRAV26-1A0A087WT03 109 aa18.6■□□□□ 0.57
CSNK1E-203ENST00000396832 LINC01559Q495D7 138 aa18.6■□□□□ 0.57
CSNK1E-203ENST00000396832 COL6A6A6NMZ7 2263 aa18.6■□□□□ 0.57
CSNK1E-203ENST00000396832 A0A1B0GWB2 263 aa18.6■□□□□ 0.57
CSNK1E-203ENST00000396832 C20orf78Q9BR46 151 aa18.59■□□□□ 0.57
CSNK1E-203ENST00000396832 MRAP2Q96G30 205 aa18.59■□□□□ 0.57
CSNK1E-203ENST00000396832 FANCD2OSQ96PS1 177 aa18.59■□□□□ 0.57
CSNK1E-203ENST00000396832 CHD8Q9HCK8 2581 aa18.58■□□□□ 0.57
CSNK1E-203ENST00000396832 RNF182Q8N6D2 247 aa18.58■□□□□ 0.56
CSNK1E-203ENST00000396832 Q8N8P6 123 aa18.58■□□□□ 0.56
CSNK1E-203ENST00000396832 Q8NA96 180 aa18.58■□□□□ 0.56
CSNK1E-203ENST00000396832 MYOZ3Q8TDC0 251 aa18.58■□□□□ 0.56
CSNK1E-203ENST00000396832 CNFNQ9BYD5 112 aa18.58■□□□□ 0.56
CSNK1E-203ENST00000396832 FAM90A27PA6NNH2 459 aa18.57■□□□□ 0.56
CSNK1E-203ENST00000396832 F8W735 103 aaPredicted RBP18.57■□□□□ 0.56
CSNK1E-203ENST00000396832 APOMO95445 188 aa18.57■□□□□ 0.56
CSNK1E-203ENST00000396832 DTX2Q86UW9 622 aa18.57■□□□□ 0.56
CSNK1E-203ENST00000396832 MAP1AP78559 2803 aaPredicted RBP18.57■□□□□ 0.56
CSNK1E-203ENST00000396832 IGHV3-49A0A0A0MS15 119 aa18.56■□□□□ 0.56
CSNK1E-203ENST00000396832 NDUFA3O95167 84 aa18.56■□□□□ 0.56
CSNK1E-203ENST00000396832 LCNL1Q6ZST4 164 aa18.56■□□□□ 0.56
CSNK1E-203ENST00000396832 IGLV2-18A0A075B6J9 118 aa18.56■□□□□ 0.56
CSNK1E-203ENST00000396832 PRSS47A8MTI9 375 aa18.56■□□□□ 0.56
CSNK1E-203ENST00000396832 LY6LH3BQJ8 138 aa18.56■□□□□ 0.56
CSNK1E-203ENST00000396832 CD3EP07766 207 aa18.56■□□□□ 0.56
CSNK1E-203ENST00000396832 CRYBA4P53673 196 aa18.56■□□□□ 0.56
CSNK1E-203ENST00000396832 GEMIN7Q9H840 131 aaKnown RBP18.55■□□□□ 0.56
CSNK1E-203ENST00000396832 MFAP4P55083 255 aa18.55■□□□□ 0.56
CSNK1E-203ENST00000396832 ZNF672Q499Z4 452 aaPredicted RBP18.55■□□□□ 0.56
CSNK1E-203ENST00000396832 C21orf62Q9NYP8 219 aa18.55■□□□□ 0.56
CSNK1E-203ENST00000396832 VPS13CQ709C8 3753 aa18.55■□□□□ 0.56
CSNK1E-203ENST00000396832 PTPRQQ9UMZ3 2332 aa18.55■□□□□ 0.56
CSNK1E-203ENST00000396832 COL12A1Q99715 3063 aa18.54■□□□□ 0.56
CSNK1E-203ENST00000396832 TRBV7-3A0A075B6L6 115 aa18.54■□□□□ 0.56
CSNK1E-203ENST00000396832 PRAC2D3DTV9 90 aa18.54■□□□□ 0.56
CSNK1E-203ENST00000396832 TMEM238LA0A1B0GVL6 79 aa18.54■□□□□ 0.56
CSNK1E-203ENST00000396832 PSMG3-AS1Q96PY0 264 aa18.54■□□□□ 0.56
CSNK1E-203ENST00000396832 A0A087WX48 190 aa18.53■□□□□ 0.56
CSNK1E-203ENST00000396832 FABP5P3A8MUU1 101 aa18.53■□□□□ 0.56
CSNK1E-203ENST00000396832 DYNAPQ8N1N2 210 aa18.53■□□□□ 0.56
CSNK1E-203ENST00000396832 DPM3Q9P2X0 92 aa18.53■□□□□ 0.56
CSNK1E-203ENST00000396832 FOXI1Q12951 378 aa18.53■□□□□ 0.56
CSNK1E-203ENST00000396832 SRSF8Q9BRL6 282 aaKnown RBP18.53■□□□□ 0.56
CSNK1E-203ENST00000396832 MRPL16Q9NX20 251 aaKnown RBP18.53■□□□□ 0.56
CSNK1E-203ENST00000396832 SMAD5-AS1Q9Y6J3 95 aa18.53■□□□□ 0.56
CSNK1E-203ENST00000396832 NCOR2Q9Y618 2525 aa18.53■□□□□ 0.56
CSNK1E-203ENST00000396832 B9A039 149 aa18.53■□□□□ 0.56
CSNK1E-203ENST00000396832 SYT8Q8NBV8 401 aa18.53■□□□□ 0.56
CSNK1E-203ENST00000396832 CFHR4Q92496 578 aa18.53■□□□□ 0.56
CSNK1E-203ENST00000396832 RAB1BQ9H0U4 201 aa18.53■□□□□ 0.56
CSNK1E-203ENST00000396832 SRSF2Q01130 221 aaKnown RBP18.52■□□□□ 0.56
CSNK1E-203ENST00000396832 LAGE3Q14657 143 aa18.52■□□□□ 0.56
CSNK1E-203ENST00000396832 C5orf64Q2M2E5 130 aa18.52■□□□□ 0.56
CSNK1E-203ENST00000396832 IGLV11-55A0A075B6I3 123 aa18.52■□□□□ 0.55
CSNK1E-203ENST00000396832 TRAV26-2A0A0B4J265 109 aa18.52■□□□□ 0.55
CSNK1E-203ENST00000396832 IGHG4P01861 327 aa18.52■□□□□ 0.55
CSNK1E-203ENST00000396832 Q6ZQT7 251 aa18.52■□□□□ 0.55
CSNK1E-203ENST00000396832 RPL7P18124 248 aaKnown RBP18.51■□□□□ 0.55
CSNK1E-203ENST00000396832 MORN3Q6PF18 240 aaPredicted RBP18.51■□□□□ 0.55
CSNK1E-203ENST00000396832 HOXA3O43365 443 aaPredicted RBP18.51■□□□□ 0.55
CSNK1E-203ENST00000396832 C8orf86Q6ZUL3 223 aa18.51■□□□□ 0.55
CSNK1E-203ENST00000396832 IL17RELQ6ZVW7 336 aa18.5■□□□□ 0.55
CSNK1E-203ENST00000396832 PLNP26678 52 aa18.5■□□□□ 0.55
CSNK1E-203ENST00000396832 EFNA4P52798 201 aa18.5■□□□□ 0.55
CSNK1E-203ENST00000396832 C1QTNF4Q9BXJ3 329 aa18.5■□□□□ 0.55
CSNK1E-203ENST00000396832 CDIP1Q9H305 208 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 347.5 ms