RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 GTSCR1Q86UQ5 136 aa7.01□□□□□ -1.29
MSH5-205ENST00000395853 MYOZ3Q8TDC0 251 aa7.01□□□□□ -1.29
MSH5-205ENST00000395853 MLST8Q9BVC4 326 aa7.01□□□□□ -1.29
MSH5-205ENST00000395853 SLC25A10Q9UBX3 287 aaPredicted RBP7.01□□□□□ -1.29
MSH5-205ENST00000395853 PRRC2CQ9Y520 2896 aaKnown RBP7.01□□□□□ -1.29
MSH5-205ENST00000395853 TRAV13-1A0A0B4J241 112 aa7□□□□□ -1.29
MSH5-205ENST00000395853 C19orf71A6NCJ1 209 aa7□□□□□ -1.29
MSH5-205ENST00000395853 TIRAPP58753 221 aa7□□□□□ -1.29
MSH5-205ENST00000395853 LOXL1Q08397 574 aaPredicted RBP7□□□□□ -1.29
MSH5-205ENST00000395853 SPTSSAQ969W0 71 aa7□□□□□ -1.29
MSH5-205ENST00000395853 FOXB1Q99853 325 aa7□□□□□ -1.29
MSH5-205ENST00000395853 NABP2Q9BQ15 211 aa7□□□□□ -1.29
MSH5-205ENST00000395853 TTTY12Q9BZ98 90 aa7□□□□□ -1.29
MSH5-205ENST00000395853 ZMAT4Q9H898 229 aa7□□□□□ -1.29
MSH5-205ENST00000395853 UTP20O75691 2785 aaKnown RBP7□□□□□ -1.29
MSH5-205ENST00000395853 hADV29S1A0JD25 119 aa7□□□□□ -1.29
MSH5-205ENST00000395853 FAM90A23PA8MXZ1 464 aa7□□□□□ -1.29
MSH5-205ENST00000395853 LGALS9O00182 355 aa7□□□□□ -1.29
MSH5-205ENST00000395853 FAM90A15PP0C7V4 464 aa7□□□□□ -1.29
MSH5-205ENST00000395853 FAM90A13PP0C7W8 464 aa7□□□□□ -1.29
MSH5-205ENST00000395853 FAM90A14PP0C7W9 464 aa7□□□□□ -1.29
MSH5-205ENST00000395853 FAM90A24PP0C7X0 464 aa7□□□□□ -1.29
MSH5-205ENST00000395853 GRNP28799 593 aaKnown RBP7□□□□□ -1.29
MSH5-205ENST00000395853 MAPKAPK5-AS1Q8N8E1 139 aa7□□□□□ -1.29
MSH5-205ENST00000395853 SSMEM1Q8WWF3 244 aa7□□□□□ -1.29
MSH5-205ENST00000395853 RPP21Q9H633 154 aaKnown RBP7□□□□□ -1.29
MSH5-205ENST00000395853 C2CD3Q4AC94 2353 aa7□□□□□ -1.29
MSH5-205ENST00000395853 FAM240AA0A1B0GVK7 77 aa6.99□□□□□ -1.29
MSH5-205ENST00000395853 WI2-2373I1.2A0A1W2PRP0 233 aa6.99□□□□□ -1.29
MSH5-205ENST00000395853 CT83Q5H943 113 aa6.99□□□□□ -1.29
MSH5-205ENST00000395853 Q6ZSR3 168 aa6.99□□□□□ -1.29
MSH5-205ENST00000395853 IL17DQ8TAD2 202 aa6.99□□□□□ -1.29
MSH5-205ENST00000395853 C20orf173Q96LM9 149 aa6.99□□□□□ -1.29
MSH5-205ENST00000395853 IGKV1-6A0A0C4DH72 117 aa6.99□□□□□ -1.29
MSH5-205ENST00000395853 ZNF785A8K8V0 405 aa6.99□□□□□ -1.29
MSH5-205ENST00000395853 ZNF561-AS1K7EIQ3 104 aa6.99□□□□□ -1.29
MSH5-205ENST00000395853 UBE2D1P51668 147 aa6.99□□□□□ -1.29
MSH5-205ENST00000395853 TEX49A0A1B0GTD5 131 aa6.99□□□□□ -1.29
MSH5-205ENST00000395853 DPM2O94777 84 aa6.99□□□□□ -1.29
MSH5-205ENST00000395853 MYCNOSP40205 109 aa6.99□□□□□ -1.29
MSH5-205ENST00000395853 PLGLB1Q02325 96 aa6.99□□□□□ -1.29
MSH5-205ENST00000395853 Q6ZT83 130 aa6.99□□□□□ -1.29
MSH5-205ENST00000395853 IL17RELQ6ZVW7 336 aa6.99□□□□□ -1.29
MSH5-205ENST00000395853 MIR17HGQ75NE6 70 aa6.99□□□□□ -1.29
MSH5-205ENST00000395853 GFRA4Q9GZZ7 299 aa6.99□□□□□ -1.29
MSH5-205ENST00000395853 NXT2Q9NPJ8 142 aaKnown RBP6.99□□□□□ -1.29
MSH5-205ENST00000395853 A0A096LPE4 126 aa6.98□□□□□ -1.29
MSH5-205ENST00000395853 TRAV17A0A0B4J275 112 aa6.98□□□□□ -1.29
MSH5-205ENST00000395853 A0A1W2PPZ6 126 aa6.98□□□□□ -1.29
MSH5-205ENST00000395853 LY6LH3BQJ8 138 aa6.98□□□□□ -1.29
MSH5-205ENST00000395853 MRPL33O75394 65 aaKnown RBP6.98□□□□□ -1.29
MSH5-205ENST00000395853 KRTAP27-1Q3LI81 207 aa6.98□□□□□ -1.29
MSH5-205ENST00000395853 MRPL20Q9BYC9 149 aaKnown RBP6.98□□□□□ -1.29
MSH5-205ENST00000395853 POLEQ07864 2286 aa6.98□□□□□ -1.29
MSH5-205ENST00000395853 IGKV1-27A0A075B6S5 117 aa6.98□□□□□ -1.29
MSH5-205ENST00000395853 CA6P23280 308 aa6.98□□□□□ -1.29
MSH5-205ENST00000395853 HLA-DMBP28068 263 aa6.98□□□□□ -1.29
MSH5-205ENST00000395853 TPSG1Q9NRR2 321 aa6.98□□□□□ -1.29
MSH5-205ENST00000395853 IGKV3D-15A0A087WSY6 115 aa6.97□□□□□ -1.29
MSH5-205ENST00000395853 IGKV1-12A0A0C4DH73 117 aa6.97□□□□□ -1.29
MSH5-205ENST00000395853 LOC389332A0A1B0GUA5 103 aa6.97□□□□□ -1.29
MSH5-205ENST00000395853 NCBP2LA6PVI3 153 aaKnown RBP6.97□□□□□ -1.29
MSH5-205ENST00000395853 IGKV1D-12P01611 117 aa6.97□□□□□ -1.29
MSH5-205ENST00000395853 TWIST1Q15672 202 aa6.97□□□□□ -1.29
MSH5-205ENST00000395853 C11orf53Q8IXP5 236 aa6.97□□□□□ -1.29
MSH5-205ENST00000395853 DRAM1Q8N682 238 aa6.97□□□□□ -1.29
MSH5-205ENST00000395853 C2orf48Q96LS8 159 aa6.97□□□□□ -1.29
MSH5-205ENST00000395853 DEFB127Q9H1M4 99 aa6.97□□□□□ -1.29
MSH5-205ENST00000395853 C7orf69Q9H7B7 122 aa6.97□□□□□ -1.29
MSH5-205ENST00000395853 TP53TG1Q9Y2A0 90 aa6.97□□□□□ -1.29
MSH5-205ENST00000395853 AMMECR1Q9Y4X0 333 aaPredicted RBP6.97□□□□□ -1.29
MSH5-205ENST00000395853 ZNF503-AS2A6NEH8 195 aa6.97□□□□□ -1.29
MSH5-205ENST00000395853 H3BMM0 161 aa6.97□□□□□ -1.29
MSH5-205ENST00000395853 PEX7O00628 323 aa6.97□□□□□ -1.29
MSH5-205ENST00000395853 UBE2WQ96B02 151 aa6.97□□□□□ -1.29
MSH5-205ENST00000395853 PLEKHB2Q96CS7 222 aa6.97□□□□□ -1.29
MSH5-205ENST00000395853 BORCS8Q96FH0 119 aa6.97□□□□□ -1.29
MSH5-205ENST00000395853 MRPS12O15235 138 aaKnown RBP6.96□□□□□ -1.29
MSH5-205ENST00000395853 P01737 135 aa6.96□□□□□ -1.29
MSH5-205ENST00000395853 COL8A2P25067 703 aa6.96□□□□□ -1.29
MSH5-205ENST00000395853 FXYD7P58549 80 aa6.96□□□□□ -1.29
MSH5-205ENST00000395853 PCBD1P61457 104 aa6.96□□□□□ -1.29
MSH5-205ENST00000395853 SPINK9Q5DT21 86 aa6.96□□□□□ -1.29
MSH5-205ENST00000395853 IGFL2Q6UWQ7 119 aa6.96□□□□□ -1.29
MSH5-205ENST00000395853 RPUSD1Q9UJJ7 312 aaKnown RBP6.96□□□□□ -1.29
MSH5-205ENST00000395853 IGLV2-14P01704 120 aa6.96□□□□□ -1.3
MSH5-205ENST00000395853 HERVK_113P61574 105 aa6.96□□□□□ -1.3
MSH5-205ENST00000395853 WFDC3Q8IUB2 231 aa6.96□□□□□ -1.3
MSH5-205ENST00000395853 SHANK2-AS3Q9BTD1 123 aa6.96□□□□□ -1.3
MSH5-205ENST00000395853 PRSS22Q9GZN4 317 aa6.96□□□□□ -1.3
MSH5-205ENST00000395853 AGPAT4-IT1Q9H0P7 198 aa6.96□□□□□ -1.3
MSH5-205ENST00000395853 KLF13Q9Y2Y9 288 aaPredicted RBP6.96□□□□□ -1.3
MSH5-205ENST00000395853 SPENQ96T58 3664 aaKnown RBP6.95□□□□□ -1.3
MSH5-205ENST00000395853 TMEM89A2RUT3 159 aa6.95□□□□□ -1.3
MSH5-205ENST00000395853 TMEM178BH3BS89 294 aa6.95□□□□□ -1.3
MSH5-205ENST00000395853 CRIP2P52943 208 aaPredicted RBP6.95□□□□□ -1.3
MSH5-205ENST00000395853 SLC25A48Q6ZT89 311 aaKnown RBP6.95□□□□□ -1.3
MSH5-205ENST00000395853 CYSTM1Q9H1C7 97 aa6.95□□□□□ -1.3
MSH5-205ENST00000395853 FBN2P35556 2912 aa6.95□□□□□ -1.3
MSH5-205ENST00000395853 H7C1H1 209 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms