RNA–Protein interactions for RNA: ENST00000393120.6

MKS1-203, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 1,926 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-203ENST00000393120 TRAV9-2A0A087WT02 112 aa10.86□□□□□ -0.67
MKS1-203ENST00000393120 TRBV7-9A0A0J9YWB2 115 aa10.86□□□□□ -0.67
MKS1-203ENST00000393120 M0R143 59 aa10.86□□□□□ -0.67
MKS1-203ENST00000393120 KRTAP10-9P60411 292 aa10.86□□□□□ -0.67
MKS1-203ENST00000393120 SAMD13Q5VXD3 122 aa10.86□□□□□ -0.67
MKS1-203ENST00000393120 LCNL1Q6ZST4 164 aa10.86□□□□□ -0.67
MKS1-203ENST00000393120 FA2HQ7L5A8 372 aa10.86□□□□□ -0.67
MKS1-203ENST00000393120 OR10J6PQ8NGY7 276 aa10.86□□□□□ -0.67
MKS1-203ENST00000393120 VPREB3Q9UKI3 123 aa10.86□□□□□ -0.67
MKS1-203ENST00000393120 MUC21A0A0G2JKD1 596 aa10.85□□□□□ -0.67
MKS1-203ENST00000393120 MUC21A0A140T8X8 626 aa10.85□□□□□ -0.67
MKS1-203ENST00000393120 CSN3P07498 182 aa10.85□□□□□ -0.67
MKS1-203ENST00000393120 MUC21Q5SSG8 566 aa10.85□□□□□ -0.67
MKS1-203ENST00000393120 ZNF705AQ6ZN79 300 aaPredicted RBP10.85□□□□□ -0.67
MKS1-203ENST00000393120 LAMTOR2Q9Y2Q5 125 aa10.85□□□□□ -0.67
MKS1-203ENST00000393120 IGHV4-4A0A075B6R2 117 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 FOXE3Q13461 319 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 TMEM95Q3KNT9 176 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 TM4SF20Q53R12 229 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 PET117Q6UWS5 81 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 MAPK1IP1LQ8NDC0 245 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 OR10AG1Q8NH19 301 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 RNF185Q96GF1 192 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 FAM19A4Q96LR4 140 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 SNHG12Q9BXW3 62 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 SIGLEC8Q9NYZ4 499 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 IGLC3P0DOY3 106 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 CKS2P33552 79 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 IFI27P40305 119 aaPredicted RBP10.84□□□□□ -0.67
MKS1-203ENST00000393120 SSTP61278 116 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 LINC00173Q6ZV60 143 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 SPATA12Q7Z6I5 190 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 MAP1LC3CQ9BXW4 147 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 MSRB1Q9NZV6 116 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 UQCR10Q9UDW1 63 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 UFC1Q9Y3C8 167 aa10.84□□□□□ -0.67
MKS1-203ENST00000393120 SVEP1Q4LDE5 3571 aa10.83□□□□□ -0.68
MKS1-203ENST00000393120 ZNF462Q96JM2 2506 aa10.83□□□□□ -0.68
MKS1-203ENST00000393120 SNAI2O43623 268 aa10.83□□□□□ -0.68
MKS1-203ENST00000393120 Q5PR19 223 aa10.83□□□□□ -0.68
MKS1-203ENST00000393120 PRSS57Q6UWY2 283 aa10.83□□□□□ -0.68
MKS1-203ENST00000393120 APRG1Q8IVJ8 170 aa10.83□□□□□ -0.68
MKS1-203ENST00000393120 ZFAND2AQ8N6M9 145 aa10.83□□□□□ -0.68
MKS1-203ENST00000393120 MYO18BQ8IUG5 2567 aa10.83□□□□□ -0.68
MKS1-203ENST00000393120 EREGO14944 169 aa10.82□□□□□ -0.68
MKS1-203ENST00000393120 MYOZ3Q8TDC0 251 aa10.82□□□□□ -0.68
MKS1-203ENST00000393120 LINC01546A6NGU7 62 aa10.82□□□□□ -0.68
MKS1-203ENST00000393120 ELANEP08246 267 aa10.82□□□□□ -0.68
MKS1-203ENST00000393120 RPL11P62913 178 aaKnown RBP10.82□□□□□ -0.68
MKS1-203ENST00000393120 CACNG7P62955 275 aa10.82□□□□□ -0.68
MKS1-203ENST00000393120 OR8A1Q8NGG7 326 aa10.82□□□□□ -0.68
MKS1-203ENST00000393120 ZNF747Q9BV97 191 aa10.82□□□□□ -0.68
MKS1-203ENST00000393120 UBR5O95071 2799 aaPredicted RBP10.81□□□□□ -0.68
MKS1-203ENST00000393120 TRAV21A0A0B4J279 112 aa10.81□□□□□ -0.68
MKS1-203ENST00000393120 TCF21O43680 179 aa10.81□□□□□ -0.68
MKS1-203ENST00000393120 PRR9Q5T870 116 aa10.81□□□□□ -0.68
MKS1-203ENST00000393120 ATOH7Q8N100 152 aa10.81□□□□□ -0.68
MKS1-203ENST00000393120 OR4C46A6NHA9 309 aa10.8□□□□□ -0.68
MKS1-203ENST00000393120 NPYP01303 97 aa10.8□□□□□ -0.68
MKS1-203ENST00000393120 RNF152Q8N8N0 203 aa10.8□□□□□ -0.68
MKS1-203ENST00000393120 ZNF702PQ9H963 129 aa10.8□□□□□ -0.68
MKS1-203ENST00000393120 A0A096LNJ9 63 aa10.8□□□□□ -0.68
MKS1-203ENST00000393120 LOC389332A0A1B0GUA5 103 aa10.8□□□□□ -0.68
MKS1-203ENST00000393120 A0A1B0GV90 55 aa10.8□□□□□ -0.68
MKS1-203ENST00000393120 ID1P41134 155 aa10.8□□□□□ -0.68
MKS1-203ENST00000393120 LINC01545Q5VT33 79 aa10.8□□□□□ -0.68
MKS1-203ENST00000393120 LGALS9O00182 355 aa10.79□□□□□ -0.68
MKS1-203ENST00000393120 RPLP1P05386 114 aaKnown RBP10.79□□□□□ -0.68
MKS1-203ENST00000393120 IGLL1P15814 213 aa10.79□□□□□ -0.68
MKS1-203ENST00000393120 MAJINQ3KP22 176 aa10.79□□□□□ -0.68
MKS1-203ENST00000393120 C10orf99Q6UWK7 81 aa10.79□□□□□ -0.68
MKS1-203ENST00000393120 SMIM15Q7Z3B0 74 aa10.79□□□□□ -0.68
MKS1-203ENST00000393120 DEFB125Q8N687 156 aa10.79□□□□□ -0.68
MKS1-203ENST00000393120 DCANP1Q8TF63 244 aa10.79□□□□□ -0.68
MKS1-203ENST00000393120 ST20Q9HBF5 79 aa10.79□□□□□ -0.68
MKS1-203ENST00000393120 SMKR1H3BMG3 65 aa10.78□□□□□ -0.68
MKS1-203ENST00000393120 LGALS1P09382 135 aaKnown RBP10.78□□□□□ -0.68
MKS1-203ENST00000393120 MED14OSP0DP75 135 aa10.78□□□□□ -0.68
MKS1-203ENST00000393120 Q6ZQT7 251 aa10.78□□□□□ -0.68
MKS1-203ENST00000393120 KRTAP1-3Q8IUG1 177 aa10.78□□□□□ -0.68
MKS1-203ENST00000393120 Q8N2B8 174 aa10.78□□□□□ -0.68
MKS1-203ENST00000393120 UBE2E2Q96LR5 201 aa10.78□□□□□ -0.68
MKS1-203ENST00000393120 MAP1LC3AQ9H492 121 aa10.78□□□□□ -0.68
MKS1-203ENST00000393120 PRSS47A8MTI9 375 aa10.78□□□□□ -0.68
MKS1-203ENST00000393120 HOXA3O43365 443 aaPredicted RBP10.78□□□□□ -0.68
MKS1-203ENST00000393120 Q96MF0 132 aa10.78□□□□□ -0.68
MKS1-203ENST00000393120 NXT2Q9NPJ8 142 aaKnown RBP10.78□□□□□ -0.68
MKS1-203ENST00000393120 TNFRSF6BO95407 300 aa10.77□□□□□ -0.69
MKS1-203ENST00000393120 NCR2O95944 276 aa10.77□□□□□ -0.69
MKS1-203ENST00000393120 MRPS16Q9Y3D3 137 aaKnown RBP10.77□□□□□ -0.69
MKS1-203ENST00000393120 ZFYVE26Q68DK2 2539 aa10.77□□□□□ -0.69
MKS1-203ENST00000393120 VPS13CQ709C8 3753 aa10.77□□□□□ -0.69
MKS1-203ENST00000393120 FBN2P35556 2912 aa10.76□□□□□ -0.69
MKS1-203ENST00000393120 HBDP02042 147 aa10.76□□□□□ -0.69
MKS1-203ENST00000393120 EVI2AP22794 236 aa10.76□□□□□ -0.69
MKS1-203ENST00000393120 NUTF2P61970 127 aaKnown RBP10.76□□□□□ -0.69
MKS1-203ENST00000393120 SPANXN1Q5VSR9 72 aa10.76□□□□□ -0.69
MKS1-203ENST00000393120 Q6ZN92 141 aa10.76□□□□□ -0.69
MKS1-203ENST00000393120 CSPG4Q6UVK1 2322 aa10.76□□□□□ -0.69
MKS1-203ENST00000393120 FAM208BQ5VWN6 2430 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms