RNA–Protein interactions for RNA: ENST00000390444.1

TRAV16-201, Transcript of T cell receptor alpha variable 16, humanhuman

APPRIS P1 BASIC

Gene TRAV16, Length 329 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV16-201ENST00000390444 CXCL1P09341 107 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 CT45A10P0DMU9 189 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 RAB5AP20339 215 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 HOXA5P20719 270 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 ZNF138P52744 262 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 KRTAP10-3P60369 221 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 SNRPD3P62318 126 aaKnown RBP3.86□□□□□ -1.79
TRAV16-201ENST00000390444 PAFAH1B2P68402 229 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 DEFB114Q30KQ6 69 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 CD300EQ496F6 205 aaPredicted RBP3.86□□□□□ -1.79
TRAV16-201ENST00000390444 TMEM78Q5T7P6 136 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 PRR27Q6MZM9 219 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 LINC00322Q6ZN03 302 aaPredicted RBP3.86□□□□□ -1.79
TRAV16-201ENST00000390444 APRG1Q8IVJ8 170 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 C11orf44Q8N8P7 122 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 OR8A1Q8NGG7 326 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 OR10J6PQ8NGY7 276 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 Q8TAT8 98 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 DYNLRB2Q8TF09 96 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 FAM19A4Q96LR4 140 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 LINC00477Q96M19 166 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 C8orf49Q96NF6 230 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 DUX3Q96PT4 197 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 SPAG8Q99932 426 aaPredicted RBP3.86□□□□□ -1.79
TRAV16-201ENST00000390444 GPR61Q9BZJ8 451 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 GFRA4Q9GZZ7 299 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 AGPAT4-IT1Q9H0P7 198 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 RNASE7Q9H1E1 156 aaKnown RBP3.86□□□□□ -1.79
TRAV16-201ENST00000390444 RPP21Q9H633 154 aaKnown RBP3.86□□□□□ -1.79
TRAV16-201ENST00000390444 URGCP-MRPS24S4R325 110 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 F8P00451 2351 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 MTORP42345 2549 aa3.86□□□□□ -1.79
TRAV16-201ENST00000390444 TGIF2-C20orf24A0A0A6YYL0 155 aa3.85□□□□□ -1.79
TRAV16-201ENST00000390444 A0A1W2PPQ1 181 aa3.85□□□□□ -1.79
TRAV16-201ENST00000390444 A8MTW9 85 aa3.85□□□□□ -1.79
TRAV16-201ENST00000390444 F5H697 171 aa3.85□□□□□ -1.79
TRAV16-201ENST00000390444 CRISP2P16562 243 aa3.85□□□□□ -1.79
TRAV16-201ENST00000390444 CRIP1P50238 77 aa3.85□□□□□ -1.79
TRAV16-201ENST00000390444 SMUG1Q53HV7 270 aa3.85□□□□□ -1.79
TRAV16-201ENST00000390444 FAM162BQ5T6X4 162 aa3.85□□□□□ -1.79
TRAV16-201ENST00000390444 RASL11AQ6T310 242 aa3.85□□□□□ -1.79
TRAV16-201ENST00000390444 FOXI2Q6ZQN5 318 aa3.85□□□□□ -1.79
TRAV16-201ENST00000390444 RBPMS2Q6ZRY4 209 aaKnown RBP3.85□□□□□ -1.79
TRAV16-201ENST00000390444 TMEM61Q8N0U2 210 aa3.85□□□□□ -1.79
TRAV16-201ENST00000390444 OR2K2Q8NGT1 345 aa3.85□□□□□ -1.79
TRAV16-201ENST00000390444 TSKUQ8WUA8 353 aa3.85□□□□□ -1.79
TRAV16-201ENST00000390444 DAZAP1Q96EP5 407 aaKnown RBP3.85□□□□□ -1.79
TRAV16-201ENST00000390444 FAM210BQ96KR6 192 aa3.85□□□□□ -1.79
TRAV16-201ENST00000390444 ASCL2Q99929 193 aa3.85□□□□□ -1.79
TRAV16-201ENST00000390444 CITED1Q99966 193 aa3.85□□□□□ -1.79
TRAV16-201ENST00000390444 AGRNO00468 2067 aa3.85□□□□□ -1.79
TRAV16-201ENST00000390444 NF1P21359 2839 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 IGKV3-7A0A075B6H7 116 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 A0A0J9YX75 114 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 IZUMO1RA6ND01 250 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 OR4C46A6NHA9 309 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 A8MWL6 223 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 KLLNB2CW77 178 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 SH2D1AO60880 128 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 DUSP14O95147 198 aaKnown RBP3.84□□□□□ -1.79
TRAV16-201ENST00000390444 CA1P00915 261 aaPredicted RBP3.84□□□□□ -1.79
TRAV16-201ENST00000390444 IGLV1-51P01701 117 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 ZNF688P0C7X2 276 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 ZNF80P51504 273 aaPredicted RBP3.84□□□□□ -1.79
TRAV16-201ENST00000390444 FOXA3P55318 350 aaPredicted RBP3.84□□□□□ -1.79
TRAV16-201ENST00000390444 FAM3BP58499 235 aaPredicted RBP3.84□□□□□ -1.79
TRAV16-201ENST00000390444 RPS20P60866 119 aaKnown RBP3.84□□□□□ -1.79
TRAV16-201ENST00000390444 RPL19P84098 196 aaKnown RBP3.84□□□□□ -1.79
TRAV16-201ENST00000390444 HIST1H1AQ02539 215 aaPredicted RBP3.84□□□□□ -1.79
TRAV16-201ENST00000390444 ERCC8Q13216 396 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 NSUN5P1Q3KNT7 163 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 COX19Q49B96 90 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 PSMG4Q5JS54 123 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 Q6AWC8 147 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 HIST2H2BDQ6DRA6 164 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 ATP5L2Q7Z4Y8 100 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 ZFAND2AQ8N6M9 145 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 IL17DQ8TAD2 202 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 FAM110AQ9BQ89 295 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 KRTAP3-1Q9BYR8 98 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 SAV1Q9H4B6 383 aaPredicted RBP3.84□□□□□ -1.79
TRAV16-201ENST00000390444 SRD5A3Q9H8P0 318 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 NAT8BQ9UHF3 227 aa3.84□□□□□ -1.79
TRAV16-201ENST00000390444 ZNF256Q9Y2P7 627 aaPredicted RBP3.84□□□□□ -1.79
TRAV16-201ENST00000390444 SETXQ7Z333 2677 aaKnown RBP3.84□□□□□ -1.8
TRAV16-201ENST00000390444 C2CD3Q4AC94 2353 aa3.83□□□□□ -1.8
TRAV16-201ENST00000390444 WNK1Q9H4A3 2382 aa3.83□□□□□ -1.8
TRAV16-201ENST00000390444 NOTCH2Q04721 2471 aa3.83□□□□□ -1.8
TRAV16-201ENST00000390444 XKRY2A2RUG3 117 aa3.83□□□□□ -1.8
TRAV16-201ENST00000390444 FABP5P3A8MUU1 101 aa3.83□□□□□ -1.8
TRAV16-201ENST00000390444 HIGD1CA8MV81 97 aa3.83□□□□□ -1.8
TRAV16-201ENST00000390444 C1orf196B1AJZ1 125 aa3.83□□□□□ -1.8
TRAV16-201ENST00000390444 F6UB75 175 aa3.83□□□□□ -1.8
TRAV16-201ENST00000390444 PHOX2AO14813 284 aa3.83□□□□□ -1.8
TRAV16-201ENST00000390444 MT-ND6P03923 174 aa3.83□□□□□ -1.8
TRAV16-201ENST00000390444 PRB4P10163 310 aaPredicted RBP3.83□□□□□ -1.8
TRAV16-201ENST00000390444 HLA-DRB4P13762 266 aa3.83□□□□□ -1.8
TRAV16-201ENST00000390444 CTRLP40313 264 aa3.83□□□□□ -1.8
TRAV16-201ENST00000390444 LEPP41159 167 aa3.83□□□□□ -1.8
TRAV16-201ENST00000390444 RPS10P46783 165 aaKnown RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms