RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 FER1L6-AS1Q8NA97 138 aa19.05■□□□□ 0.64
SHOX2-201ENST00000389589 SONP18583 2426 aaKnown RBP19.04■□□□□ 0.64
SHOX2-201ENST00000389589 IGLC6P0CF74 106 aa19.04■□□□□ 0.64
SHOX2-201ENST00000389589 LOC102724200A0A096LPH7 203 aaPredicted RBP19.04■□□□□ 0.64
SHOX2-201ENST00000389589 DCANP1Q8TF63 244 aa19.04■□□□□ 0.64
SHOX2-201ENST00000389589 KCNS1Q96KK3 526 aa19.04■□□□□ 0.64
SHOX2-201ENST00000389589 PCP4L1A6NKN8 68 aa19.03■□□□□ 0.64
SHOX2-201ENST00000389589 OR8A1Q8NGG7 326 aa19.03■□□□□ 0.64
SHOX2-201ENST00000389589 C4orf3Q8WVX3 66 aa19.03■□□□□ 0.64
SHOX2-201ENST00000389589 ZNF705DP0CH99 300 aaPredicted RBP19.02■□□□□ 0.64
SHOX2-201ENST00000389589 ZNF705BP0CI00 300 aaPredicted RBP19.02■□□□□ 0.64
SHOX2-201ENST00000389589 ZNF493Q6ZR52 646 aa19.02■□□□□ 0.64
SHOX2-201ENST00000389589 SAMD10Q9BYL1 202 aa19.02■□□□□ 0.64
SHOX2-201ENST00000389589 TRBV7-9A0A0J9YWB2 115 aa19.02■□□□□ 0.63
SHOX2-201ENST00000389589 SRD5A1P18405 259 aa19.02■□□□□ 0.63
SHOX2-201ENST00000389589 RCHY1Q96PM5 261 aa19.02■□□□□ 0.63
SHOX2-201ENST00000389589 ESM1Q9NQ30 184 aa19.02■□□□□ 0.63
SHOX2-201ENST00000389589 TMEM160Q9NX00 188 aa19.02■□□□□ 0.63
SHOX2-201ENST00000389589 S100A12P80511 92 aa19.01■□□□□ 0.63
SHOX2-201ENST00000389589 ZNF575Q86XF7 245 aa19.01■□□□□ 0.63
SHOX2-201ENST00000389589 MYO9AB2RTY4 2548 aa19.01■□□□□ 0.63
SHOX2-201ENST00000389589 MS4A6AQ9H2W1 248 aa19.01■□□□□ 0.63
SHOX2-201ENST00000389589 C2orf70A6NJV1 201 aa19■□□□□ 0.63
SHOX2-201ENST00000389589 LINC01619G3V211 115 aa19■□□□□ 0.63
SHOX2-201ENST00000389589 M0QZ24 198 aa19■□□□□ 0.63
SHOX2-201ENST00000389589 IQCJQ1A5X6 159 aa18.99■□□□□ 0.63
SHOX2-201ENST00000389589 AKAP9Q99996 3911 aa18.99■□□□□ 0.63
SHOX2-201ENST00000389589 GPX1P07203 203 aa18.99■□□□□ 0.63
SHOX2-201ENST00000389589 TCTEX1D4Q5JR98 221 aa18.99■□□□□ 0.63
SHOX2-201ENST00000389589 WFDC12Q8WWY7 111 aa18.99■□□□□ 0.63
SHOX2-201ENST00000389589 FAM19A4Q96LR4 140 aa18.99■□□□□ 0.63
SHOX2-201ENST00000389589 SELENOKQ9Y6D0 94 aa18.99■□□□□ 0.63
SHOX2-201ENST00000389589 IGKV3D-20A0A0C4DH25 116 aa18.98■□□□□ 0.63
SHOX2-201ENST00000389589 CNFNQ9BYD5 112 aa18.98■□□□□ 0.63
SHOX2-201ENST00000389589 C18orf65Q6ZTR6 163 aa18.97■□□□□ 0.63
SHOX2-201ENST00000389589 WFDC3Q8IUB2 231 aa18.97■□□□□ 0.63
SHOX2-201ENST00000389589 ZFAND2AQ8N6M9 145 aa18.97■□□□□ 0.63
SHOX2-201ENST00000389589 DPF1Q92782 380 aa18.97■□□□□ 0.63
SHOX2-201ENST00000389589 RNASE1P07998 156 aaKnown RBP18.97■□□□□ 0.63
SHOX2-201ENST00000389589 PRR31Q5SQ13 230 aa18.97■□□□□ 0.63
SHOX2-201ENST00000389589 C11orf21Q9P2W6 132 aa18.97■□□□□ 0.63
SHOX2-201ENST00000389589 ZNF324O75467 553 aaPredicted RBP18.96■□□□□ 0.63
SHOX2-201ENST00000389589 SNRPD3P62318 126 aaKnown RBP18.96■□□□□ 0.63
SHOX2-201ENST00000389589 KHDC1LQ5JSQ8 128 aa18.96■□□□□ 0.63
SHOX2-201ENST00000389589 ACANP16112 2415 aa18.96■□□□□ 0.63
SHOX2-201ENST00000389589 F6UB75 175 aa18.96■□□□□ 0.63
SHOX2-201ENST00000389589 SLURP1P55000 103 aa18.96■□□□□ 0.63
SHOX2-201ENST00000389589 DEFB136Q30KP8 78 aa18.96■□□□□ 0.63
SHOX2-201ENST00000389589 CDPF1Q6NVV7 123 aa18.96■□□□□ 0.63
SHOX2-201ENST00000389589 OR11H1Q8NG94 326 aa18.96■□□□□ 0.63
SHOX2-201ENST00000389589 OR1N2Q8NGR9 330 aa18.96■□□□□ 0.63
SHOX2-201ENST00000389589 TRAV21A0A0B4J279 112 aa18.95■□□□□ 0.62
SHOX2-201ENST00000389589 K7EQG2 157 aa18.95■□□□□ 0.62
SHOX2-201ENST00000389589 AMTP48728 403 aa18.95■□□□□ 0.62
SHOX2-201ENST00000389589 DEFB1P60022 68 aa18.95■□□□□ 0.62
SHOX2-201ENST00000389589 TWIST1Q15672 202 aa18.95■□□□□ 0.62
SHOX2-201ENST00000389589 PRR9Q5T870 116 aa18.95■□□□□ 0.62
SHOX2-201ENST00000389589 APRG1Q8IVJ8 170 aa18.95■□□□□ 0.62
SHOX2-201ENST00000389589 PEMTQ9UBM1 199 aa18.95■□□□□ 0.62
SHOX2-201ENST00000389589 GSN-AS1Q9NRJ2 163 aa18.94■□□□□ 0.62
SHOX2-201ENST00000389589 NTF3P20783 257 aa18.94■□□□□ 0.62
SHOX2-201ENST00000389589 DMRTA1Q5VZB9 504 aa18.94■□□□□ 0.62
SHOX2-201ENST00000389589 KLHL30-AS1Q8NEE0 82 aa18.94■□□□□ 0.62
SHOX2-201ENST00000389589 ZNF418Q8TF45 676 aaPredicted RBP18.94■□□□□ 0.62
SHOX2-201ENST00000389589 FASNP49327 2511 aaKnown RBP18.94■□□□□ 0.62
SHOX2-201ENST00000389589 FAM104BQ5XKR9 115 aa18.93■□□□□ 0.62
SHOX2-201ENST00000389589 PMCHP20382 165 aa18.93■□□□□ 0.62
SHOX2-201ENST00000389589 TFPI2P48307 235 aa18.93■□□□□ 0.62
SHOX2-201ENST00000389589 Q6ZWC4 215 aa18.93■□□□□ 0.62
SHOX2-201ENST00000389589 C16orf95Q9H693 158 aa18.93■□□□□ 0.62
SHOX2-201ENST00000389589 HSBP1O75506 76 aa18.92■□□□□ 0.62
SHOX2-201ENST00000389589 NIT1Q86X76 327 aa18.92■□□□□ 0.62
SHOX2-201ENST00000389589 MUC21A0A0G2JKD1 596 aa18.91■□□□□ 0.62
SHOX2-201ENST00000389589 MUC21A0A140T8X8 626 aa18.91■□□□□ 0.62
SHOX2-201ENST00000389589 SSTP61278 116 aa18.91■□□□□ 0.62
SHOX2-201ENST00000389589 MUC21Q5SSG8 566 aa18.91■□□□□ 0.62
SHOX2-201ENST00000389589 RNASEKQ6P5S7 137 aaKnown RBP18.91■□□□□ 0.62
SHOX2-201ENST00000389589 ZNF688P0C7X2 276 aa18.91■□□□□ 0.62
SHOX2-201ENST00000389589 PSMG4Q5JS54 123 aa18.91■□□□□ 0.62
SHOX2-201ENST00000389589 CHCHD1Q96BP2 118 aaKnown RBP18.91■□□□□ 0.62
SHOX2-201ENST00000389589 TMEM191AQ9H0A3 160 aa18.91■□□□□ 0.62
SHOX2-201ENST00000389589 ADAMTSL5Q6ZMM2 481 aa18.9■□□□□ 0.62
SHOX2-201ENST00000389589 OR9G4Q8NGQ1 327 aa18.9■□□□□ 0.62
SHOX2-201ENST00000389589 SCGB1D1O95968 90 aa18.89■□□□□ 0.62
SHOX2-201ENST00000389589 J3KRW8 73 aa18.89■□□□□ 0.61
SHOX2-201ENST00000389589 OR5AL1P0C617 328 aa18.89■□□□□ 0.61
SHOX2-201ENST00000389589 ODF3Q96PU9 254 aa18.89■□□□□ 0.61
SHOX2-201ENST00000389589 U3KQK5 164 aa18.89■□□□□ 0.61
SHOX2-201ENST00000389589 RNASE4P34096 147 aaKnown RBP18.88■□□□□ 0.61
SHOX2-201ENST00000389589 HILS1P60008 231 aa18.88■□□□□ 0.61
SHOX2-201ENST00000389589 AMN1Q8IY45 258 aa18.88■□□□□ 0.61
SHOX2-201ENST00000389589 Q6ZQT7 251 aa18.88■□□□□ 0.61
SHOX2-201ENST00000389589 URB1-AS1Q96HZ7 61 aa18.88■□□□□ 0.61
SHOX2-201ENST00000389589 NAGKQ9UJ70 344 aa18.88■□□□□ 0.61
SHOX2-201ENST00000389589 ANK3Q12955 4377 aaKnown RBP18.88■□□□□ 0.61
SHOX2-201ENST00000389589 HECTD1Q9ULT8 2610 aa18.87■□□□□ 0.61
SHOX2-201ENST00000389589 KLLNB2CW77 178 aa18.87■□□□□ 0.61
SHOX2-201ENST00000389589 SNAI2O43623 268 aa18.87■□□□□ 0.61
SHOX2-201ENST00000389589 CACNG7P62955 275 aa18.87■□□□□ 0.61
SHOX2-201ENST00000389589 EBLN2Q6P2I7 272 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms