RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 MIC13Q5XKP0 118 aa11.34□□□□□ -0.59
HMGN1-203ENST00000380748 Q8TAT8 98 aa11.34□□□□□ -0.59
HMGN1-203ENST00000380748 ZNF492Q9P255 531 aa11.34□□□□□ -0.59
HMGN1-203ENST00000380748 PYYP10082 97 aa11.33□□□□□ -0.6
HMGN1-203ENST00000380748 CAMLGP49069 296 aa11.33□□□□□ -0.6
HMGN1-203ENST00000380748 TMEM183BQ1AE95 376 aa11.33□□□□□ -0.6
HMGN1-203ENST00000380748 FAM122CQ6P4D5 195 aa11.33□□□□□ -0.6
HMGN1-203ENST00000380748 TMEM183AQ8IXX5 376 aa11.33□□□□□ -0.6
HMGN1-203ENST00000380748 SPXQ9BT56 116 aa11.33□□□□□ -0.6
HMGN1-203ENST00000380748 RABL2AQ9UBK7 228 aaPredicted RBP11.33□□□□□ -0.6
HMGN1-203ENST00000380748 RSL24D1Q9UHA3 163 aaKnown RBP11.33□□□□□ -0.6
HMGN1-203ENST00000380748 TIMM9Q9Y5J7 89 aa11.33□□□□□ -0.6
HMGN1-203ENST00000380748 TSC22D2O75157 780 aa11.32□□□□□ -0.6
HMGN1-203ENST00000380748 SCGB1D2O95969 90 aa11.32□□□□□ -0.6
HMGN1-203ENST00000380748 HIST1H1EP10412 219 aaKnown RBP11.32□□□□□ -0.6
HMGN1-203ENST00000380748 GATA1P15976 413 aaPredicted RBP11.32□□□□□ -0.6
HMGN1-203ENST00000380748 ACOT6Q3I5F7 207 aaPredicted RBP11.32□□□□□ -0.6
HMGN1-203ENST00000380748 LELP1Q5T871 98 aa11.32□□□□□ -0.6
HMGN1-203ENST00000380748 Q6ZRG5 221 aa11.32□□□□□ -0.6
HMGN1-203ENST00000380748 OR1L4Q8NGR5 311 aa11.32□□□□□ -0.6
HMGN1-203ENST00000380748 MCFD2Q8NI22 146 aa11.32□□□□□ -0.6
HMGN1-203ENST00000380748 GGACTQ9BVM4 153 aa11.32□□□□□ -0.6
HMGN1-203ENST00000380748 PFN1P07737 140 aaKnown RBP11.31□□□□□ -0.6
HMGN1-203ENST00000380748 FAUP35544 74 aaKnown RBP11.31□□□□□ -0.6
HMGN1-203ENST00000380748 PDE6HQ13956 83 aa11.31□□□□□ -0.6
HMGN1-203ENST00000380748 NRARPQ7Z6K4 114 aa11.31□□□□□ -0.6
HMGN1-203ENST00000380748 TMEM14CQ9P0S9 112 aa11.31□□□□□ -0.6
HMGN1-203ENST00000380748 ASIPP42127 132 aa11.3□□□□□ -0.6
HMGN1-203ENST00000380748 ZNF138P52744 262 aa11.3□□□□□ -0.6
HMGN1-203ENST00000380748 UBE2MP61081 183 aaKnown RBP11.3□□□□□ -0.6
HMGN1-203ENST00000380748 SPCS2Q15005 226 aa11.3□□□□□ -0.6
HMGN1-203ENST00000380748 PFDN5Q99471 154 aa11.3□□□□□ -0.6
HMGN1-203ENST00000380748 AAMDCQ9H7C9 122 aa11.3□□□□□ -0.6
HMGN1-203ENST00000380748 TRGV11A0A075B6L2 103 aa11.29□□□□□ -0.6
HMGN1-203ENST00000380748 TRAV8-3A0A0A6YYJ7 113 aa11.29□□□□□ -0.6
HMGN1-203ENST00000380748 IGLV2-11P01706 119 aa11.29□□□□□ -0.6
HMGN1-203ENST00000380748 TAS2R30P59541 319 aa11.29□□□□□ -0.6
HMGN1-203ENST00000380748 ZNF266Q14584 549 aa11.29□□□□□ -0.6
HMGN1-203ENST00000380748 SLC25A29Q8N8R3 303 aa11.29□□□□□ -0.6
HMGN1-203ENST00000380748 SLC25A21Q9BQT8 299 aaPredicted RBP11.29□□□□□ -0.6
HMGN1-203ENST00000380748 C9orf170A2RU37 121 aa11.28□□□□□ -0.6
HMGN1-203ENST00000380748 RAB31Q13636 194 aa11.28□□□□□ -0.6
HMGN1-203ENST00000380748 BAK1Q16611 211 aa11.28□□□□□ -0.6
HMGN1-203ENST00000380748 DAZ4Q86SG3 579 aaKnown RBP11.28□□□□□ -0.6
HMGN1-203ENST00000380748 C12orf45Q8N5I9 185 aaPredicted RBP11.28□□□□□ -0.6
HMGN1-203ENST00000380748 TRIM63Q969Q1 353 aa11.28□□□□□ -0.6
HMGN1-203ENST00000380748 DAZ3Q9NR90 486 aaKnown RBP11.28□□□□□ -0.6
HMGN1-203ENST00000380748 SLC39A9Q9NUM3 307 aa11.28□□□□□ -0.6
HMGN1-203ENST00000380748 TRBV7-9A0A0J9YWB2 115 aa11.27□□□□□ -0.61
HMGN1-203ENST00000380748 C7orf66A4D0T2 115 aa11.27□□□□□ -0.61
HMGN1-203ENST00000380748 RNF222A6NCQ9 220 aa11.27□□□□□ -0.61
HMGN1-203ENST00000380748 FABP12A6NFH5 140 aa11.27□□□□□ -0.61
HMGN1-203ENST00000380748 M0R2P5 195 aa11.27□□□□□ -0.61
HMGN1-203ENST00000380748 FAM159AQ6UWV7 190 aa11.27□□□□□ -0.61
HMGN1-203ENST00000380748 Q8N976 141 aa11.27□□□□□ -0.61
HMGN1-203ENST00000380748 GTSF1LQ9H1H1 148 aa11.27□□□□□ -0.61
HMGN1-203ENST00000380748 NAGKQ9UJ70 344 aa11.27□□□□□ -0.61
HMGN1-203ENST00000380748 Q6AWC8 147 aa11.26□□□□□ -0.61
HMGN1-203ENST00000380748 TOMM5Q8N4H5 51 aa11.26□□□□□ -0.61
HMGN1-203ENST00000380748 ATP6V0E2Q8NHE4 81 aa11.26□□□□□ -0.61
HMGN1-203ENST00000380748 PRADC1Q9BSG0 188 aa11.26□□□□□ -0.61
HMGN1-203ENST00000380748 GPN1Q9HCN4 374 aaPredicted RBP11.26□□□□□ -0.61
HMGN1-203ENST00000380748 WDR83OSQ9Y284 106 aa11.26□□□□□ -0.61
HMGN1-203ENST00000380748 FBLL1A6NHQ2 334 aaKnown RBP11.25□□□□□ -0.61
HMGN1-203ENST00000380748 GNRH2O43555 120 aa11.25□□□□□ -0.61
HMGN1-203ENST00000380748 AP3S2P59780 193 aa11.25□□□□□ -0.61
HMGN1-203ENST00000380748 IAH1Q2TAA2 248 aaPredicted RBP11.25□□□□□ -0.61
HMGN1-203ENST00000380748 DNAJC30Q96LL9 226 aa11.25□□□□□ -0.61
HMGN1-203ENST00000380748 RPL29P47914 159 aaKnown RBP11.24□□□□□ -0.61
HMGN1-203ENST00000380748 RHOHQ15669 191 aa11.24□□□□□ -0.61
HMGN1-203ENST00000380748 SLC25A2Q9BXI2 301 aa11.24□□□□□ -0.61
HMGN1-203ENST00000380748 GSKIPQ9P0R6 139 aa11.24□□□□□ -0.61
HMGN1-203ENST00000380748 IGHV3-73A0A0B4J1V6 119 aa11.23□□□□□ -0.61
HMGN1-203ENST00000380748 CST7O76096 145 aa11.23□□□□□ -0.61
HMGN1-203ENST00000380748 MBPP02686 304 aaPredicted RBP11.23□□□□□ -0.61
HMGN1-203ENST00000380748 SMIM18P0DKX4 95 aa11.23□□□□□ -0.61
HMGN1-203ENST00000380748 GCSAMLQ5JQS6 135 aa11.23□□□□□ -0.61
HMGN1-203ENST00000380748 TOR2AQ5JU69 321 aa11.23□□□□□ -0.61
HMGN1-203ENST00000380748 UQCC1Q9NVA1 299 aa11.23□□□□□ -0.61
HMGN1-203ENST00000380748 COX11Q9Y6N1 276 aa11.23□□□□□ -0.61
HMGN1-203ENST00000380748 UBE2L5PA0A1B0GUS4 154 aa11.22□□□□□ -0.61
HMGN1-203ENST00000380748 GGTLC3B5MD39 225 aa11.22□□□□□ -0.61
HMGN1-203ENST00000380748 CAV2P51636 162 aa11.22□□□□□ -0.61
HMGN1-203ENST00000380748 DYNC2LI1Q8TCX1 351 aa11.22□□□□□ -0.61
HMGN1-203ENST00000380748 PHYHIPLQ96FC7 376 aa11.22□□□□□ -0.61
HMGN1-203ENST00000380748 FAM167A-AS1Q96KT0 104 aa11.22□□□□□ -0.61
HMGN1-203ENST00000380748 RPH3ALQ9UNE2 315 aa11.22□□□□□ -0.61
HMGN1-203ENST00000380748 IGKV2D-24A0A075B6R9 120 aa11.21□□□□□ -0.61
HMGN1-203ENST00000380748 TRBV6-4A0A1B0GX49 114 aa11.21□□□□□ -0.61
HMGN1-203ENST00000380748 C5orf51A6NDU8 294 aa11.21□□□□□ -0.61
HMGN1-203ENST00000380748 NBEAP1P0C6P0 100 aa11.21□□□□□ -0.61
HMGN1-203ENST00000380748 BAXQ07812 192 aa11.21□□□□□ -0.61
HMGN1-203ENST00000380748 VWC2Q2TAL6 325 aa11.21□□□□□ -0.61
HMGN1-203ENST00000380748 DPPA3Q6W0C5 159 aa11.21□□□□□ -0.61
HMGN1-203ENST00000380748 C20orf85Q9H1P6 137 aa11.21□□□□□ -0.61
HMGN1-203ENST00000380748 RBAKDNA6NC62 111 aa11.2□□□□□ -0.62
HMGN1-203ENST00000380748 L7N2F9 121 aa11.2□□□□□ -0.62
HMGN1-203ENST00000380748 TYMSP04818 313 aa11.2□□□□□ -0.62
HMGN1-203ENST00000380748 BCAP31P51572 246 aa11.2□□□□□ -0.62
HMGN1-203ENST00000380748 VAMP2P63027 116 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms