RNA–Protein interactions for RNA: ENST00000379516.6

SNX2-201, Transcript of sorting nexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX2, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-201ENST00000379516 KCNS1Q96KK3 526 aa11.39□□□□□ -0.59
SNX2-201ENST00000379516 LINC00477Q96M19 166 aa11.39□□□□□ -0.59
SNX2-201ENST00000379516 LOC102724200A0A096LPH7 203 aaPredicted RBP11.38□□□□□ -0.59
SNX2-201ENST00000379516 MUC21A0A0G2JKD1 596 aa11.38□□□□□ -0.59
SNX2-201ENST00000379516 MUC21A0A140T8X8 626 aa11.38□□□□□ -0.59
SNX2-201ENST00000379516 HIST1H1AQ02539 215 aaPredicted RBP11.38□□□□□ -0.59
SNX2-201ENST00000379516 MUC21Q5SSG8 566 aa11.38□□□□□ -0.59
SNX2-201ENST00000379516 REC114Q7Z4M0 266 aa11.38□□□□□ -0.59
SNX2-201ENST00000379516 ITPR2Q14571 2701 aa11.38□□□□□ -0.59
SNX2-201ENST00000379516 LINC01559Q495D7 138 aa11.38□□□□□ -0.59
SNX2-201ENST00000379516 C18orf65Q6ZTR6 163 aa11.38□□□□□ -0.59
SNX2-201ENST00000379516 GSN-AS1Q9NRJ2 163 aa11.38□□□□□ -0.59
SNX2-201ENST00000379516 LENEPQ9Y5L5 61 aa11.38□□□□□ -0.59
SNX2-201ENST00000379516 AKAP9Q99996 3911 aa11.37□□□□□ -0.59
SNX2-201ENST00000379516 GCN1Q92616 2671 aaKnown RBP11.37□□□□□ -0.59
SNX2-201ENST00000379516 F6UB75 175 aa11.37□□□□□ -0.59
SNX2-201ENST00000379516 LGALS9O00182 355 aa11.37□□□□□ -0.59
SNX2-201ENST00000379516 GPX1P07203 203 aa11.37□□□□□ -0.59
SNX2-201ENST00000379516 Q6ZSV7 163 aa11.37□□□□□ -0.59
SNX2-201ENST00000379516 IGLC6P0CF74 106 aa11.36□□□□□ -0.59
SNX2-201ENST00000379516 PMCHP20382 165 aa11.36□□□□□ -0.59
SNX2-201ENST00000379516 ID1P41134 155 aa11.36□□□□□ -0.59
SNX2-201ENST00000379516 DEFB136Q30KP8 78 aa11.36□□□□□ -0.59
SNX2-201ENST00000379516 GATD1Q8NB37 220 aa11.36□□□□□ -0.59
SNX2-201ENST00000379516 OR8A1Q8NGG7 326 aa11.36□□□□□ -0.59
SNX2-201ENST00000379516 DCANP1Q8TF63 244 aa11.36□□□□□ -0.59
SNX2-201ENST00000379516 ESM1Q9NQ30 184 aa11.36□□□□□ -0.59
SNX2-201ENST00000379516 IGKV3D-20A0A0C4DH25 116 aa11.36□□□□□ -0.59
SNX2-201ENST00000379516 J3KRW8 73 aa11.36□□□□□ -0.59
SNX2-201ENST00000379516 CTRLP40313 264 aa11.36□□□□□ -0.59
SNX2-201ENST00000379516 TFPI2P48307 235 aa11.36□□□□□ -0.59
SNX2-201ENST00000379516 AMTP48728 403 aa11.36□□□□□ -0.59
SNX2-201ENST00000379516 S100A12P80511 92 aa11.36□□□□□ -0.59
SNX2-201ENST00000379516 KHDC1LQ5JSQ8 128 aa11.36□□□□□ -0.59
SNX2-201ENST00000379516 DNLZQ5SXM8 178 aa11.36□□□□□ -0.59
SNX2-201ENST00000379516 C11orf21Q9P2W6 132 aa11.36□□□□□ -0.59
SNX2-201ENST00000379516 TWIST1Q15672 202 aa11.35□□□□□ -0.59
SNX2-201ENST00000379516 PRR9Q5T870 116 aa11.35□□□□□ -0.59
SNX2-201ENST00000379516 SAMD13Q5VXD3 122 aa11.35□□□□□ -0.59
SNX2-201ENST00000379516 Q6ZQT7 251 aa11.35□□□□□ -0.59
SNX2-201ENST00000379516 Q6ZWC4 215 aa11.35□□□□□ -0.59
SNX2-201ENST00000379516 MS4A6AQ9H2W1 248 aa11.35□□□□□ -0.59
SNX2-201ENST00000379516 SONP18583 2426 aaKnown RBP11.35□□□□□ -0.59
SNX2-201ENST00000379516 ZNF324O75467 553 aaPredicted RBP11.35□□□□□ -0.59
SNX2-201ENST00000379516 SCGB1D1O95968 90 aa11.35□□□□□ -0.59
SNX2-201ENST00000379516 CD33P20138 364 aa11.35□□□□□ -0.59
SNX2-201ENST00000379516 SLURP1P55000 103 aa11.35□□□□□ -0.59
SNX2-201ENST00000379516 TCTEX1D4Q5JR98 221 aa11.35□□□□□ -0.59
SNX2-201ENST00000379516 ZNF493Q6ZR52 646 aa11.35□□□□□ -0.59
SNX2-201ENST00000379516 C2orf70A6NJV1 201 aa11.34□□□□□ -0.59
SNX2-201ENST00000379516 NTF3P20783 257 aa11.34□□□□□ -0.59
SNX2-201ENST00000379516 RNASEKQ6P5S7 137 aaKnown RBP11.34□□□□□ -0.59
SNX2-201ENST00000379516 FAM19A2Q8N3H0 131 aa11.34□□□□□ -0.59
SNX2-201ENST00000379516 NIT1Q86X76 327 aa11.33□□□□□ -0.6
SNX2-201ENST00000379516 ZFAND2AQ8N6M9 145 aa11.33□□□□□ -0.6
SNX2-201ENST00000379516 OR11H1Q8NG94 326 aa11.33□□□□□ -0.6
SNX2-201ENST00000379516 LINC01619G3V211 115 aa11.33□□□□□ -0.6
SNX2-201ENST00000379516 HSBP1O75506 76 aa11.33□□□□□ -0.6
SNX2-201ENST00000379516 C4orf3Q8WVX3 66 aa11.33□□□□□ -0.6
SNX2-201ENST00000379516 DPF1Q92782 380 aa11.33□□□□□ -0.6
SNX2-201ENST00000379516 M0QZ24 198 aa11.32□□□□□ -0.6
SNX2-201ENST00000379516 HIST2H2BDQ6DRA6 164 aa11.32□□□□□ -0.6
SNX2-201ENST00000379516 AMN1Q8IY45 258 aa11.32□□□□□ -0.6
SNX2-201ENST00000379516 DUX3Q96PT4 197 aa11.32□□□□□ -0.6
SNX2-201ENST00000379516 ZNF688P0C7X2 276 aa11.32□□□□□ -0.6
SNX2-201ENST00000379516 FAM104BQ5XKR9 115 aa11.32□□□□□ -0.6
SNX2-201ENST00000379516 FAM19A4Q96LR4 140 aa11.32□□□□□ -0.6
SNX2-201ENST00000379516 PSMG4Q5JS54 123 aa11.31□□□□□ -0.6
SNX2-201ENST00000379516 KLHL30-AS1Q8NEE0 82 aa11.31□□□□□ -0.6
SNX2-201ENST00000379516 OR1N2Q8NGR9 330 aa11.31□□□□□ -0.6
SNX2-201ENST00000379516 URB1-AS1Q96HZ7 61 aa11.31□□□□□ -0.6
SNX2-201ENST00000379516 CNFNQ9BYD5 112 aa11.31□□□□□ -0.6
SNX2-201ENST00000379516 MSRB1Q9NZV6 116 aa11.31□□□□□ -0.6
SNX2-201ENST00000379516 NAGKQ9UJ70 344 aa11.31□□□□□ -0.6
SNX2-201ENST00000379516 CUBNO60494 3623 aa11.31□□□□□ -0.6
SNX2-201ENST00000379516 TRAV21A0A0B4J279 112 aa11.3□□□□□ -0.6
SNX2-201ENST00000379516 K7EQG2 157 aa11.3□□□□□ -0.6
SNX2-201ENST00000379516 RNASE4P34096 147 aaKnown RBP11.3□□□□□ -0.6
SNX2-201ENST00000379516 SNRPD3P62318 126 aaKnown RBP11.3□□□□□ -0.6
SNX2-201ENST00000379516 MYO9AB2RTY4 2548 aa11.3□□□□□ -0.6
SNX2-201ENST00000379516 KRTDAPP60985 99 aa11.3□□□□□ -0.6
SNX2-201ENST00000379516 SCGB2A2Q13296 93 aa11.3□□□□□ -0.6
SNX2-201ENST00000379516 ADAMTSL5Q6ZMM2 481 aa11.3□□□□□ -0.6
SNX2-201ENST00000379516 SMR3AQ99954 134 aa11.3□□□□□ -0.6
SNX2-201ENST00000379516 ANK3Q12955 4377 aaKnown RBP11.3□□□□□ -0.6
SNX2-201ENST00000379516 ACANP16112 2415 aa11.29□□□□□ -0.6
SNX2-201ENST00000379516 M0R2Z0 102 aa11.29□□□□□ -0.6
SNX2-201ENST00000379516 CSN3P07498 182 aa11.29□□□□□ -0.6
SNX2-201ENST00000379516 KIR3DS1Q14943 382 aa11.29□□□□□ -0.6
SNX2-201ENST00000379516 RNF114Q9Y508 228 aa11.29□□□□□ -0.6
SNX2-201ENST00000379516 FASNP49327 2511 aaKnown RBP11.29□□□□□ -0.6
SNX2-201ENST00000379516 HECTD1Q9ULT8 2610 aa11.29□□□□□ -0.6
SNX2-201ENST00000379516 TRBV7-9A0A0J9YWB2 115 aa11.29□□□□□ -0.6
SNX2-201ENST00000379516 D6R8Y8 96 aa11.29□□□□□ -0.6
SNX2-201ENST00000379516 LINC00614P0C842 121 aa11.29□□□□□ -0.6
SNX2-201ENST00000379516 MRPL51Q4U2R6 128 aaKnown RBP11.29□□□□□ -0.6
SNX2-201ENST00000379516 C11orf44Q8N8P7 122 aa11.29□□□□□ -0.6
SNX2-201ENST00000379516 CHCHD1Q96BP2 118 aaKnown RBP11.29□□□□□ -0.6
SNX2-201ENST00000379516 TMEM191AQ9H0A3 160 aa11.29□□□□□ -0.6
SNX2-201ENST00000379516 RNASE1P07998 156 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms