RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 ARFGEF3Q5TH69 2177 aa10.76□□□□□ -0.69
GPC6-201ENST00000377047 HEATR5AQ86XA9 2040 aa10.76□□□□□ -0.69
GPC6-201ENST00000377047 TRAV8-3A0A0A6YYJ7 113 aa10.76□□□□□ -0.69
GPC6-201ENST00000377047 OR11H6Q8NGC7 330 aa10.76□□□□□ -0.69
GPC6-201ENST00000377047 A0A1B0GUS0 222 aa10.76□□□□□ -0.69
GPC6-201ENST00000377047 Q8N8P6 123 aa10.76□□□□□ -0.69
GPC6-201ENST00000377047 C10orf105Q8TEF2 133 aa10.76□□□□□ -0.69
GPC6-201ENST00000377047 OVOL2Q9BRP0 275 aa10.75□□□□□ -0.69
GPC6-201ENST00000377047 IGLV2-23P01705 113 aa10.75□□□□□ -0.69
GPC6-201ENST00000377047 HIST1H4AP62805 103 aaKnown RBP10.75□□□□□ -0.69
GPC6-201ENST00000377047 APRG1Q8IVJ8 170 aa10.75□□□□□ -0.69
GPC6-201ENST00000377047 LOC105371267A0A1B0GV96 52 aa10.75□□□□□ -0.69
GPC6-201ENST00000377047 IGLV3-1P01715 115 aa10.75□□□□□ -0.69
GPC6-201ENST00000377047 FOXE3Q13461 319 aa10.75□□□□□ -0.69
GPC6-201ENST00000377047 C8orf31Q8N9H6 132 aa10.75□□□□□ -0.69
GPC6-201ENST00000377047 VOPP1Q96AW1 172 aa10.75□□□□□ -0.69
GPC6-201ENST00000377047 MRPL51Q4U2R6 128 aaKnown RBP10.75□□□□□ -0.69
GPC6-201ENST00000377047 NXPH4O95158 308 aa10.74□□□□□ -0.69
GPC6-201ENST00000377047 C2orf82Q6UX34 121 aa10.74□□□□□ -0.69
GPC6-201ENST00000377047 HLA-DMBP28068 263 aa10.74□□□□□ -0.69
GPC6-201ENST00000377047 NBASA2RRP1 2371 aa10.74□□□□□ -0.69
GPC6-201ENST00000377047 WNK2Q9Y3S1 2297 aa10.74□□□□□ -0.69
GPC6-201ENST00000377047 GP9P14770 177 aa10.74□□□□□ -0.69
GPC6-201ENST00000377047 ZNF491Q8N8L2 437 aa10.74□□□□□ -0.69
GPC6-201ENST00000377047 ZC2HC1AQ96GY0 325 aa10.74□□□□□ -0.69
GPC6-201ENST00000377047 CT83Q5H943 113 aa10.74□□□□□ -0.69
GPC6-201ENST00000377047 FAM231BA6NCW3 169 aa10.73□□□□□ -0.69
GPC6-201ENST00000377047 MRPL53Q96EL3 112 aaKnown RBP10.73□□□□□ -0.69
GPC6-201ENST00000377047 IGKV1OR2-108A0A075B7D4 117 aa10.73□□□□□ -0.69
GPC6-201ENST00000377047 TMEM126AQ9H061 195 aa10.73□□□□□ -0.69
GPC6-201ENST00000377047 IGKV2D-24A0A075B6R9 120 aa10.73□□□□□ -0.69
GPC6-201ENST00000377047 LHBP01229 141 aa10.73□□□□□ -0.69
GPC6-201ENST00000377047 BLCAPP62952 87 aa10.73□□□□□ -0.69
GPC6-201ENST00000377047 STPG4Q8N801 248 aa10.73□□□□□ -0.69
GPC6-201ENST00000377047 C17orf77Q96MU5 243 aa10.73□□□□□ -0.69
GPC6-201ENST00000377047 ZNF726P1Q15940 193 aa10.73□□□□□ -0.69
GPC6-201ENST00000377047 FXYD5Q96DB9 178 aa10.73□□□□□ -0.69
GPC6-201ENST00000377047 A0A1W2PNU3 283 aaPredicted RBP10.73□□□□□ -0.69
GPC6-201ENST00000377047 PRSS57Q6UWY2 283 aa10.73□□□□□ -0.69
GPC6-201ENST00000377047 SPAG8Q99932 426 aaPredicted RBP10.73□□□□□ -0.69
GPC6-201ENST00000377047 SNHG12Q9BXW3 62 aa10.73□□□□□ -0.69
GPC6-201ENST00000377047 U3KQE9 123 aa10.73□□□□□ -0.69
GPC6-201ENST00000377047 ASPHD1Q5U4P2 390 aa10.72□□□□□ -0.69
GPC6-201ENST00000377047 IGLC7A0M8Q6 106 aa10.72□□□□□ -0.69
GPC6-201ENST00000377047 PRSS29PA6NIE9 313 aa10.72□□□□□ -0.69
GPC6-201ENST00000377047 SLAQ13239 276 aa10.72□□□□□ -0.69
GPC6-201ENST00000377047 IGHV1-24A0A0C4DH33 117 aa10.72□□□□□ -0.69
GPC6-201ENST00000377047 PIFOQ8TCI5 191 aa10.72□□□□□ -0.69
GPC6-201ENST00000377047 DNAJC30Q96LL9 226 aa10.72□□□□□ -0.69
GPC6-201ENST00000377047 RHOHQ15669 191 aa10.71□□□□□ -0.69
GPC6-201ENST00000377047 Q9HAA7 133 aa10.71□□□□□ -0.69
GPC6-201ENST00000377047 GNRH2O43555 120 aa10.71□□□□□ -0.7
GPC6-201ENST00000377047 DAZAP2Q15038 168 aaPredicted RBP10.71□□□□□ -0.7
GPC6-201ENST00000377047 KLF5Q13887 457 aaPredicted RBP10.7□□□□□ -0.7
GPC6-201ENST00000377047 RNASE13Q5GAN3 156 aaKnown RBP10.7□□□□□ -0.7
GPC6-201ENST00000377047 Q6ZQT7 251 aa10.7□□□□□ -0.7
GPC6-201ENST00000377047 DYNAPQ8N1N2 210 aa10.7□□□□□ -0.7
GPC6-201ENST00000377047 RPL32P62910 135 aaKnown RBP10.7□□□□□ -0.7
GPC6-201ENST00000377047 POU2AF1Q16633 256 aa10.7□□□□□ -0.7
GPC6-201ENST00000377047 IGHV7-81A0A0B4J1V7 117 aa10.7□□□□□ -0.7
GPC6-201ENST00000377047 RITA1Q96K30 269 aa10.69□□□□□ -0.7
GPC6-201ENST00000377047 ZGRF1Q86YA3 2104 aa10.69□□□□□ -0.7
GPC6-201ENST00000377047 NPBQ8NG41 125 aa10.69□□□□□ -0.7
GPC6-201ENST00000377047 AJUBAQ96IF1 538 aa10.69□□□□□ -0.7
GPC6-201ENST00000377047 ADCYAP1P18509 176 aa10.69□□□□□ -0.7
GPC6-201ENST00000377047 C18orf32Q8TCD1 76 aa10.69□□□□□ -0.7
GPC6-201ENST00000377047 GAGE2EQ4V326 116 aa10.69□□□□□ -0.7
GPC6-201ENST00000377047 GAGE2DQ9UEU5 116 aa10.69□□□□□ -0.7
GPC6-201ENST00000377047 KIR3DS1Q14943 382 aa10.69□□□□□ -0.7
GPC6-201ENST00000377047 MPV17L2Q567V2 206 aa10.69□□□□□ -0.7
GPC6-201ENST00000377047 FGF23Q9GZV9 251 aaPredicted RBP10.69□□□□□ -0.7
GPC6-201ENST00000377047 ZNF48Q96MX3 618 aaPredicted RBP10.68□□□□□ -0.7
GPC6-201ENST00000377047 PYGO2Q9BRQ0 406 aa10.68□□□□□ -0.7
GPC6-201ENST00000377047 C9JQL5 133 aa10.68□□□□□ -0.7
GPC6-201ENST00000377047 GAGE2AQ6NT46 116 aa10.68□□□□□ -0.7
GPC6-201ENST00000377047 V9GYV3 84 aa10.68□□□□□ -0.7
GPC6-201ENST00000377047 PLA2G5P39877 138 aa10.67□□□□□ -0.7
GPC6-201ENST00000377047 XCL1P47992 114 aa10.67□□□□□ -0.7
GPC6-201ENST00000377047 SEM1Q6ZVN7 128 aa10.67□□□□□ -0.7
GPC6-201ENST00000377047 PCNX1Q96RV3 2341 aa10.67□□□□□ -0.7
GPC6-201ENST00000377047 SMIM27A0A1W2PRY6 76 aa10.67□□□□□ -0.7
GPC6-201ENST00000377047 SPINK8P0C7L1 97 aa10.67□□□□□ -0.7
GPC6-201ENST00000377047 ADAMTS9Q9P2N4 1935 aa10.67□□□□□ -0.7
GPC6-201ENST00000377047 CFHR4Q92496 578 aa10.67□□□□□ -0.7
GPC6-201ENST00000377047 IGHV4OR15-8A0A075B7B6 117 aa10.67□□□□□ -0.7
GPC6-201ENST00000377047 A0A087WW49 117 aa10.67□□□□□ -0.7
GPC6-201ENST00000377047 SRSF2Q01130 221 aaKnown RBP10.66□□□□□ -0.7
GPC6-201ENST00000377047 Q0VG73 95 aa10.66□□□□□ -0.7
GPC6-201ENST00000377047 DENND4CQ5VZ89 1909 aa10.66□□□□□ -0.7
GPC6-201ENST00000377047 PCP4P48539 62 aa10.66□□□□□ -0.7
GPC6-201ENST00000377047 GTF3C1Q12789 2109 aa10.66□□□□□ -0.7
GPC6-201ENST00000377047 FAM231DQ6ZW35 169 aa10.66□□□□□ -0.7
GPC6-201ENST00000377047 C5orf56Q8N8D9 126 aa10.66□□□□□ -0.7
GPC6-201ENST00000377047 AGPAT4-IT1Q9H0P7 198 aa10.66□□□□□ -0.7
GPC6-201ENST00000377047 ZFP36P26651 326 aaKnown RBP10.66□□□□□ -0.7
GPC6-201ENST00000377047 UBE2BP63146 152 aa10.66□□□□□ -0.7
GPC6-201ENST00000377047 DOCK10Q96BY6 2186 aa10.66□□□□□ -0.7
GPC6-201ENST00000377047 NPYP01303 97 aa10.66□□□□□ -0.7
GPC6-201ENST00000377047 SMIM2Q9BVW6 85 aa10.66□□□□□ -0.7
GPC6-201ENST00000377047 HERVK_113P63121 156 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 123.7 ms