RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ZNF738Q8NE65 137 aa18.99■□□□□ 0.63
CTSA-203ENST00000372459 YAE1D1Q9NRH1 226 aa18.99■□□□□ 0.63
CTSA-203ENST00000372459 PMCHP20382 165 aa18.98■□□□□ 0.63
CTSA-203ENST00000372459 ZNF80P51504 273 aaPredicted RBP18.98■□□□□ 0.63
CTSA-203ENST00000372459 ZNF138P52744 262 aa18.98■□□□□ 0.63
CTSA-203ENST00000372459 KRTDAPP60985 99 aa18.98■□□□□ 0.63
CTSA-203ENST00000372459 HAX1O00165 279 aa18.97■□□□□ 0.63
CTSA-203ENST00000372459 TDRG1Q3Y452 100 aa18.97■□□□□ 0.63
CTSA-203ENST00000372459 C20orf173Q96LM9 149 aa18.97■□□□□ 0.63
CTSA-203ENST00000372459 SSBP4Q9BWG4 385 aaPredicted RBP18.97■□□□□ 0.63
CTSA-203ENST00000372459 A0A1B0GUT8 65 aa18.96■□□□□ 0.63
CTSA-203ENST00000372459 DNAJC9-AS1A6NH13 148 aa18.96■□□□□ 0.63
CTSA-203ENST00000372459 FABP5P3A8MUU1 101 aa18.96■□□□□ 0.63
CTSA-203ENST00000372459 RPS20P60866 119 aaKnown RBP18.96■□□□□ 0.63
CTSA-203ENST00000372459 NIT1Q86X76 327 aa18.96■□□□□ 0.63
CTSA-203ENST00000372459 KLHDC1Q8N7A1 406 aa18.96■□□□□ 0.63
CTSA-203ENST00000372459 PPP1R14DQ9NXH3 145 aa18.96■□□□□ 0.63
CTSA-203ENST00000372459 PAM16Q9Y3D7 125 aa18.96■□□□□ 0.63
CTSA-203ENST00000372459 SRSF2Q01130 221 aaKnown RBP18.95■□□□□ 0.62
CTSA-203ENST00000372459 RIGQ13278 110 aa18.95■□□□□ 0.62
CTSA-203ENST00000372459 FLNAP21333 2647 aaKnown RBP18.94■□□□□ 0.62
CTSA-203ENST00000372459 IGHV4OR15-8A0A075B7B6 117 aa18.94■□□□□ 0.62
CTSA-203ENST00000372459 A0A087WW49 117 aa18.94■□□□□ 0.62
CTSA-203ENST00000372459 FAM181BA6NEQ2 426 aa18.94■□□□□ 0.62
CTSA-203ENST00000372459 OVOL1O14753 267 aa18.94■□□□□ 0.62
CTSA-203ENST00000372459 EDN2P20800 178 aa18.94■□□□□ 0.62
CTSA-203ENST00000372459 ZNF705AQ6ZN79 300 aaPredicted RBP18.94■□□□□ 0.62
CTSA-203ENST00000372459 BORCS7Q96B45 105 aa18.94■□□□□ 0.62
CTSA-203ENST00000372459 TMSB15BA0A087X1C1 80 aa18.93■□□□□ 0.62
CTSA-203ENST00000372459 TMEM213A2RRL7 107 aa18.93■□□□□ 0.62
CTSA-203ENST00000372459 LGALS9O00182 355 aa18.93■□□□□ 0.62
CTSA-203ENST00000372459 ALKBH7Q9BT30 221 aaPredicted RBP18.93■□□□□ 0.62
CTSA-203ENST00000372459 IGKV3-7A0A075B6H7 116 aa18.93■□□□□ 0.62
CTSA-203ENST00000372459 A0A1B0GW15 77 aa18.93■□□□□ 0.62
CTSA-203ENST00000372459 SAMD13Q5VXD3 122 aa18.93■□□□□ 0.62
CTSA-203ENST00000372459 TPPP3Q9BW30 176 aa18.93■□□□□ 0.62
CTSA-203ENST00000372459 ARMS2P0C7Q2 107 aa18.92■□□□□ 0.62
CTSA-203ENST00000372459 OR10J6PQ8NGY7 276 aa18.92■□□□□ 0.62
CTSA-203ENST00000372459 C3orf79P0CE67 100 aa18.92■□□□□ 0.62
CTSA-203ENST00000372459 HOXD3P31249 432 aaPredicted RBP18.92■□□□□ 0.62
CTSA-203ENST00000372459 SYNJ2BPP57105 145 aa18.92■□□□□ 0.62
CTSA-203ENST00000372459 Q6ZSV7 163 aa18.92■□□□□ 0.62
CTSA-203ENST00000372459 LINC00477Q96M19 166 aa18.92■□□□□ 0.62
CTSA-203ENST00000372459 LENEPQ9Y5L5 61 aa18.92■□□□□ 0.62
CTSA-203ENST00000372459 UNC79Q9P2D8 2635 aa18.91■□□□□ 0.62
CTSA-203ENST00000372459 TLN2Q9Y4G6 2542 aa18.91■□□□□ 0.62
CTSA-203ENST00000372459 CTRLP40313 264 aa18.91■□□□□ 0.62
CTSA-203ENST00000372459 ORM1P02763 201 aa18.9■□□□□ 0.62
CTSA-203ENST00000372459 HIST1H1AQ02539 215 aaPredicted RBP18.9■□□□□ 0.62
CTSA-203ENST00000372459 SCGB2A2Q13296 93 aa18.9■□□□□ 0.62
CTSA-203ENST00000372459 LINC01559Q495D7 138 aa18.9■□□□□ 0.62
CTSA-203ENST00000372459 LYZL1Q6UWQ5 148 aa18.9■□□□□ 0.62
CTSA-203ENST00000372459 TCAPO15273 167 aa18.89■□□□□ 0.61
CTSA-203ENST00000372459 ID1P41134 155 aa18.89■□□□□ 0.61
CTSA-203ENST00000372459 FAM19A2Q8N3H0 131 aa18.89■□□□□ 0.61
CTSA-203ENST00000372459 ESM1Q9NQ30 184 aa18.89■□□□□ 0.61
CTSA-203ENST00000372459 SELENOKQ9Y6D0 94 aa18.89■□□□□ 0.61
CTSA-203ENST00000372459 ITPR2Q14571 2701 aa18.89■□□□□ 0.61
CTSA-203ENST00000372459 HSBP1O75506 76 aa18.88■□□□□ 0.61
CTSA-203ENST00000372459 SRD5A1P18405 259 aa18.88■□□□□ 0.61
CTSA-203ENST00000372459 NTF3P20783 257 aa18.88■□□□□ 0.61
CTSA-203ENST00000372459 FER1L6-AS1Q8NA97 138 aa18.88■□□□□ 0.61
CTSA-203ENST00000372459 GATD1Q8NB37 220 aa18.88■□□□□ 0.61
CTSA-203ENST00000372459 AKAP9Q99996 3911 aa18.88■□□□□ 0.61
CTSA-203ENST00000372459 DCANP1Q8TF63 244 aa18.87■□□□□ 0.61
CTSA-203ENST00000372459 SPATA45Q537H7 98 aa18.86■□□□□ 0.61
CTSA-203ENST00000372459 C4orf3Q8WVX3 66 aa18.86■□□□□ 0.61
CTSA-203ENST00000372459 C18orf65Q6ZTR6 163 aa18.86■□□□□ 0.61
CTSA-203ENST00000372459 OR8A1Q8NGG7 326 aa18.86■□□□□ 0.61
CTSA-203ENST00000372459 IGLC6P0CF74 106 aa18.85■□□□□ 0.61
CTSA-203ENST00000372459 PRR31Q5SQ13 230 aa18.85■□□□□ 0.61
CTSA-203ENST00000372459 GCN1Q92616 2671 aaKnown RBP18.85■□□□□ 0.61
CTSA-203ENST00000372459 SONP18583 2426 aaKnown RBP18.85■□□□□ 0.61
CTSA-203ENST00000372459 LOC102724200A0A096LPH7 203 aaPredicted RBP18.84■□□□□ 0.61
CTSA-203ENST00000372459 LINC01619G3V211 115 aa18.84■□□□□ 0.61
CTSA-203ENST00000372459 PMCHL1Q16048 86 aa18.84■□□□□ 0.61
CTSA-203ENST00000372459 TCTEX1D4Q5JR98 221 aa18.84■□□□□ 0.61
CTSA-203ENST00000372459 ZNF575Q86XF7 245 aa18.84■□□□□ 0.61
CTSA-203ENST00000372459 WFDC3Q8IUB2 231 aa18.84■□□□□ 0.61
CTSA-203ENST00000372459 MS4A6AQ9H2W1 248 aa18.84■□□□□ 0.61
CTSA-203ENST00000372459 TMEM160Q9NX00 188 aa18.84■□□□□ 0.61
CTSA-203ENST00000372459 C2orf70A6NJV1 201 aa18.84■□□□□ 0.61
CTSA-203ENST00000372459 M0R2Z0 102 aa18.84■□□□□ 0.61
CTSA-203ENST00000372459 KHDC1LQ5JSQ8 128 aa18.84■□□□□ 0.61
CTSA-203ENST00000372459 DEFB136Q30KP8 78 aa18.83■□□□□ 0.61
CTSA-203ENST00000372459 RNASEKQ6P5S7 137 aaKnown RBP18.83■□□□□ 0.61
CTSA-203ENST00000372459 M0QZ24 198 aa18.82■□□□□ 0.6
CTSA-203ENST00000372459 DEFB1P60022 68 aa18.82■□□□□ 0.6
CTSA-203ENST00000372459 ZNF493Q6ZR52 646 aa18.82■□□□□ 0.6
CTSA-203ENST00000372459 UQCR10Q9UDW1 63 aa18.82■□□□□ 0.6
CTSA-203ENST00000372459 IGKV3D-20A0A0C4DH25 116 aa18.82■□□□□ 0.6
CTSA-203ENST00000372459 SLURP1P55000 103 aa18.82■□□□□ 0.6
CTSA-203ENST00000372459 OR11H1Q8NG94 326 aa18.82■□□□□ 0.6
CTSA-203ENST00000372459 DPF1Q92782 380 aa18.82■□□□□ 0.6
CTSA-203ENST00000372459 F6UB75 175 aa18.81■□□□□ 0.6
CTSA-203ENST00000372459 TRBV7-9A0A0J9YWB2 115 aa18.81■□□□□ 0.6
CTSA-203ENST00000372459 RNASE1P07998 156 aaKnown RBP18.81■□□□□ 0.6
CTSA-203ENST00000372459 ZFAND2AQ8N6M9 145 aa18.81■□□□□ 0.6
CTSA-203ENST00000372459 CHCHD1Q96BP2 118 aaKnown RBP18.81■□□□□ 0.6
CTSA-203ENST00000372459 FAM19A4Q96LR4 140 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms