RNA–Protein interactions for RNA: ENST00000370025.8

PRPF38B-203, Transcript of pre-mRNA processing factor 38B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF38B, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-203ENST00000370025 C7orf69Q9H7B7 122 aa7.8□□□□□ -1.16
PRPF38B-203ENST00000370025 EPG5Q9HCE0 2579 aa7.8□□□□□ -1.16
PRPF38B-203ENST00000370025 TRAV40A0A0B4J280 105 aa7.8□□□□□ -1.16
PRPF38B-203ENST00000370025 SMKR1H3BMG3 65 aa7.8□□□□□ -1.16
PRPF38B-203ENST00000370025 PATE2Q6UY27 113 aa7.8□□□□□ -1.16
PRPF38B-203ENST00000370025 DEFB104AQ8WTQ1 72 aa7.8□□□□□ -1.16
PRPF38B-203ENST00000370025 J3QR89 54 aa7.8□□□□□ -1.16
PRPF38B-203ENST00000370025 K7EIM0 57 aa7.8□□□□□ -1.16
PRPF38B-203ENST00000370025 IGHV7-81A0A0B4J1V7 117 aa7.79□□□□□ -1.16
PRPF38B-203ENST00000370025 A0A1B0GWB2 263 aa7.79□□□□□ -1.16
PRPF38B-203ENST00000370025 FGF6P10767 208 aa7.79□□□□□ -1.16
PRPF38B-203ENST00000370025 NDPQ00604 133 aa7.79□□□□□ -1.16
PRPF38B-203ENST00000370025 FAM162BQ5T6X4 162 aa7.79□□□□□ -1.16
PRPF38B-203ENST00000370025 IGHV3-66A0A0C4DH42 116 aa7.79□□□□□ -1.16
PRPF38B-203ENST00000370025 A0A1B0GXF2 115 aa7.79□□□□□ -1.16
PRPF38B-203ENST00000370025 TGFAP01135 160 aa7.79□□□□□ -1.16
PRPF38B-203ENST00000370025 EXOC3-AS1Q8N2X6 119 aa7.79□□□□□ -1.16
PRPF38B-203ENST00000370025 FAM167A-AS1Q96KT0 104 aa7.79□□□□□ -1.16
PRPF38B-203ENST00000370025 ABCA2Q9BZC7 2435 aa7.79□□□□□ -1.16
PRPF38B-203ENST00000370025 POLQO75417 2590 aa7.79□□□□□ -1.16
PRPF38B-203ENST00000370025 IGFL4Q6B9Z1 124 aa7.79□□□□□ -1.16
PRPF38B-203ENST00000370025 BRD3OSQ6XYD6 125 aa7.79□□□□□ -1.16
PRPF38B-203ENST00000370025 VGLL1Q99990 258 aa7.79□□□□□ -1.16
PRPF38B-203ENST00000370025 HIF1ANQ9NWT6 349 aa7.79□□□□□ -1.16
PRPF38B-203ENST00000370025 IGLV11-55A0A075B6I3 123 aa7.78□□□□□ -1.16
PRPF38B-203ENST00000370025 MFAP4P55083 255 aa7.78□□□□□ -1.16
PRPF38B-203ENST00000370025 RBPMS2Q6ZRY4 209 aaKnown RBP7.78□□□□□ -1.16
PRPF38B-203ENST00000370025 ZNF414Q96IQ9 312 aa7.78□□□□□ -1.16
PRPF38B-203ENST00000370025 CCDC168Q8NDH2 2452 aa7.78□□□□□ -1.16
PRPF38B-203ENST00000370025 RASL11AQ6T310 242 aa7.78□□□□□ -1.16
PRPF38B-203ENST00000370025 ZNF48Q96MX3 618 aaPredicted RBP7.78□□□□□ -1.16
PRPF38B-203ENST00000370025 FANCD2OSQ96PS1 177 aa7.78□□□□□ -1.16
PRPF38B-203ENST00000370025 EPDR1Q9UM22 224 aa7.78□□□□□ -1.16
PRPF38B-203ENST00000370025 HIGD1AQ9Y241 93 aa7.78□□□□□ -1.16
PRPF38B-203ENST00000370025 SVEP1Q4LDE5 3571 aa7.78□□□□□ -1.16
PRPF38B-203ENST00000370025 GTSCR1Q86UQ5 136 aa7.77□□□□□ -1.16
PRPF38B-203ENST00000370025 GLMPQ8WWB7 406 aa7.77□□□□□ -1.16
PRPF38B-203ENST00000370025 GPR82Q96P67 336 aa7.77□□□□□ -1.16
PRPF38B-203ENST00000370025 NACAE9PAV3 2078 aa7.77□□□□□ -1.17
PRPF38B-203ENST00000370025 IGKV2D-26A0A0A0MRZ7 120 aa7.77□□□□□ -1.17
PRPF38B-203ENST00000370025 D6R8Y8 96 aa7.77□□□□□ -1.17
PRPF38B-203ENST00000370025 SCGB2A1O75556 95 aa7.77□□□□□ -1.17
PRPF38B-203ENST00000370025 SPINK8P0C7L1 97 aa7.77□□□□□ -1.17
PRPF38B-203ENST00000370025 NOTCH2Q04721 2471 aa7.77□□□□□ -1.17
PRPF38B-203ENST00000370025 IGHV4-38-2P0DP08 117 aa7.77□□□□□ -1.17
PRPF38B-203ENST00000370025 EGR2P11161 476 aaPredicted RBP7.77□□□□□ -1.17
PRPF38B-203ENST00000370025 LINC01356Q8N9X3 169 aa7.77□□□□□ -1.17
PRPF38B-203ENST00000370025 SYT8Q8NBV8 401 aa7.77□□□□□ -1.17
PRPF38B-203ENST00000370025 MOB4Q9Y3A3 225 aa7.77□□□□□ -1.17
PRPF38B-203ENST00000370025 IGKV1-17P01599 117 aa7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 PRSS1P07477 247 aa7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 SMIM17P0DL12 118 aa7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 ATP5L2Q7Z4Y8 100 aa7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 BOD1L2Q8IYS8 172 aa7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 RPL11P62913 178 aaKnown RBP7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 ECSCRQ19T08 205 aa7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 FAM110DQ8TAY7 271 aaPredicted RBP7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 ZNF418Q8TF45 676 aaPredicted RBP7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 RNF183Q96D59 192 aa7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 SPANXB1Q9NS25 103 aaPredicted RBP7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 BEX4Q9NWD9 120 aaPredicted RBP7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 C21orf62Q9NYP8 219 aa7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 SMPXQ9UHP9 88 aa7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 LRRK2Q5S007 2527 aa7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 CT45A10P0DMU9 189 aa7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 AMN1Q8IY45 258 aa7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 C5orf56Q8N8D9 126 aa7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 ZNF479Q96JC4 524 aa7.76□□□□□ -1.17
PRPF38B-203ENST00000370025 TMEM213A2RRL7 107 aa7.75□□□□□ -1.17
PRPF38B-203ENST00000370025 ATP6V0E1O15342 81 aa7.75□□□□□ -1.17
PRPF38B-203ENST00000370025 MT-ATP8P03928 68 aa7.75□□□□□ -1.17
PRPF38B-203ENST00000370025 FAM231DQ6ZW35 169 aa7.75□□□□□ -1.17
PRPF38B-203ENST00000370025 TMEM219Q86XT9 240 aa7.75□□□□□ -1.17
PRPF38B-203ENST00000370025 B5MCH6 92 aa7.75□□□□□ -1.17
PRPF38B-203ENST00000370025 M0R3E3 92 aa7.75□□□□□ -1.17
PRPF38B-203ENST00000370025 PTH2Q96A98 100 aa7.75□□□□□ -1.17
PRPF38B-203ENST00000370025 FXYD5Q96DB9 178 aa7.75□□□□□ -1.17
PRPF38B-203ENST00000370025 UBR5O95071 2799 aaPredicted RBP7.75□□□□□ -1.17
PRPF38B-203ENST00000370025 NPIPB6E9PJ23 425 aa7.75□□□□□ -1.17
PRPF38B-203ENST00000370025 APOMO95445 188 aa7.75□□□□□ -1.17
PRPF38B-203ENST00000370025 MRAP2Q96G30 205 aa7.75□□□□□ -1.17
PRPF38B-203ENST00000370025 CHAC1Q9BUX1 264 aa7.75□□□□□ -1.17
PRPF38B-203ENST00000370025 A0A1B0GUT8 65 aa7.74□□□□□ -1.17
PRPF38B-203ENST00000370025 PIFOQ8TCI5 191 aa7.74□□□□□ -1.17
PRPF38B-203ENST00000370025 SLC25A39Q9BZJ4 359 aaPredicted RBP7.74□□□□□ -1.17
PRPF38B-203ENST00000370025 SIGLEC8Q9NYZ4 499 aa7.74□□□□□ -1.17
PRPF38B-203ENST00000370025 KRTAP10-9P60411 292 aa7.74□□□□□ -1.17
PRPF38B-203ENST00000370025 DEFB113Q30KQ7 82 aa7.74□□□□□ -1.17
PRPF38B-203ENST00000370025 GAGE13Q4V321 117 aa7.74□□□□□ -1.17
PRPF38B-203ENST00000370025 IFI27L1Q96BM0 104 aa7.74□□□□□ -1.17
PRPF38B-203ENST00000370025 RNF125Q96EQ8 232 aa7.74□□□□□ -1.17
PRPF38B-203ENST00000370025 NDFIP1Q9BT67 221 aa7.74□□□□□ -1.17
PRPF38B-203ENST00000370025 TMEM160Q9NX00 188 aa7.74□□□□□ -1.17
PRPF38B-203ENST00000370025 J3QLI3 93 aa7.74□□□□□ -1.17
PRPF38B-203ENST00000370025 IL4P05112 153 aa7.74□□□□□ -1.17
PRPF38B-203ENST00000370025 SHISA2Q6UWI4 295 aa7.74□□□□□ -1.17
PRPF38B-203ENST00000370025 LRRC75A-AS1Q8N1F1 130 aa7.74□□□□□ -1.17
PRPF38B-203ENST00000370025 OR4X2Q8NGF9 303 aa7.74□□□□□ -1.17
PRPF38B-203ENST00000370025 A0A096LNJ9 63 aa7.73□□□□□ -1.17
PRPF38B-203ENST00000370025 ZNF491Q8N8L2 437 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms