RNA–Protein interactions for RNA: ENST00000366894.5

PRKN-203, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 1,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-203ENST00000366894 TREM1Q9NP99 234 aa11.15□□□□□ -0.62
PRKN-203ENST00000366894 KLK5Q9Y337 293 aaPredicted RBP11.15□□□□□ -0.62
PRKN-203ENST00000366894 TRAV12-3A0A0B4J271 114 aa11.14□□□□□ -0.63
PRKN-203ENST00000366894 NUPR2A6NF83 97 aa11.14□□□□□ -0.63
PRKN-203ENST00000366894 RGS13O14921 159 aa11.14□□□□□ -0.63
PRKN-203ENST00000366894 HTN1P15515 57 aa11.14□□□□□ -0.63
PRKN-203ENST00000366894 UBE2G1P62253 170 aa11.14□□□□□ -0.63
PRKN-203ENST00000366894 CD300CQ08708 224 aa11.14□□□□□ -0.63
PRKN-203ENST00000366894 GFI1BQ5VTD9 330 aa11.14□□□□□ -0.63
PRKN-203ENST00000366894 ZNF680Q8NEM1 530 aa11.14□□□□□ -0.63
PRKN-203ENST00000366894 LINC00467Q9BRT7 94 aa11.14□□□□□ -0.63
PRKN-203ENST00000366894 ZFP30Q9Y2G7 519 aa11.14□□□□□ -0.63
PRKN-203ENST00000366894 TRAV21A0A0B4J279 112 aa11.13□□□□□ -0.63
PRKN-203ENST00000366894 LYRM9A8MSI8 78 aa11.13□□□□□ -0.63
PRKN-203ENST00000366894 FLI1Q01543 452 aaPredicted RBP11.13□□□□□ -0.63
PRKN-203ENST00000366894 FAM159AQ6UWV7 190 aa11.13□□□□□ -0.63
PRKN-203ENST00000366894 TMEM263Q8WUH6 116 aaKnown RBP11.13□□□□□ -0.63
PRKN-203ENST00000366894 FMC1Q96HJ9 113 aa11.13□□□□□ -0.63
PRKN-203ENST00000366894 PSG8Q9UQ74 426 aa11.13□□□□□ -0.63
PRKN-203ENST00000366894 TIMM8BQ9Y5J9 83 aaPredicted RBP11.13□□□□□ -0.63
PRKN-203ENST00000366894 SNURFLB1AK76 121 aa11.12□□□□□ -0.63
PRKN-203ENST00000366894 GGTLC3B5MD39 225 aa11.12□□□□□ -0.63
PRKN-203ENST00000366894 J3KRW8 73 aa11.12□□□□□ -0.63
PRKN-203ENST00000366894 PEX7O00628 323 aa11.12□□□□□ -0.63
PRKN-203ENST00000366894 PAGE4O60829 102 aa11.12□□□□□ -0.63
PRKN-203ENST00000366894 RBMY1A1P0DJD3 496 aaKnown RBP11.12□□□□□ -0.63
PRKN-203ENST00000366894 RBMY1CP0DJD4 496 aa11.12□□□□□ -0.63
PRKN-203ENST00000366894 RBMY1FQ15415 496 aaKnown RBP11.12□□□□□ -0.63
PRKN-203ENST00000366894 SMUG1Q53HV7 270 aa11.12□□□□□ -0.63
PRKN-203ENST00000366894 EIF4E3Q8N5X7 224 aaKnown RBP11.12□□□□□ -0.63
PRKN-203ENST00000366894 KCNS1Q96KK3 526 aa11.12□□□□□ -0.63
PRKN-203ENST00000366894 YTHDF2Q9Y5A9 579 aaKnown RBP11.12□□□□□ -0.63
PRKN-203ENST00000366894 CBY3A6NI87 242 aa11.11□□□□□ -0.63
PRKN-203ENST00000366894 ZNF705GA8MUZ8 300 aaPredicted RBP11.11□□□□□ -0.63
PRKN-203ENST00000366894 ZNF324O75467 553 aaPredicted RBP11.11□□□□□ -0.63
PRKN-203ENST00000366894 EMP1P54849 157 aa11.11□□□□□ -0.63
PRKN-203ENST00000366894 ANXA2RQ3ZCQ2 193 aa11.11□□□□□ -0.63
PRKN-203ENST00000366894 Q6AWC8 147 aa11.11□□□□□ -0.63
PRKN-203ENST00000366894 ZFAND2AQ8N6M9 145 aa11.11□□□□□ -0.63
PRKN-203ENST00000366894 PLA2G2EQ9NZK7 142 aa11.11□□□□□ -0.63
PRKN-203ENST00000366894 GNG13Q9P2W3 67 aa11.11□□□□□ -0.63
PRKN-203ENST00000366894 DEFB4AO15263 64 aa11.1□□□□□ -0.63
PRKN-203ENST00000366894 PDE6DO43924 150 aa11.1□□□□□ -0.63
PRKN-203ENST00000366894 TCTAP57738 103 aa11.1□□□□□ -0.63
PRKN-203ENST00000366894 GNG5P63218 68 aa11.1□□□□□ -0.63
PRKN-203ENST00000366894 PRNTQ86SH4 94 aa11.1□□□□□ -0.63
PRKN-203ENST00000366894 IGHV1OR15-1A0A075B7D0 117 aa11.09□□□□□ -0.63
PRKN-203ENST00000366894 TRBV6-1A0A0K0K1D8 114 aa11.09□□□□□ -0.63
PRKN-203ENST00000366894 A0A1B0GV50 99 aa11.09□□□□□ -0.63
PRKN-203ENST00000366894 AKR1C3P42330 323 aa11.09□□□□□ -0.63
PRKN-203ENST00000366894 NKX2-5P52952 324 aaPredicted RBP11.09□□□□□ -0.63
PRKN-203ENST00000366894 ALKAL2Q6UX46 152 aa11.09□□□□□ -0.63
PRKN-203ENST00000366894 Q8TAT8 98 aa11.09□□□□□ -0.63
PRKN-203ENST00000366894 DKK2Q9UBU2 259 aa11.09□□□□□ -0.63
PRKN-203ENST00000366894 KLF12Q9Y4X4 402 aa11.09□□□□□ -0.63
PRKN-203ENST00000366894 ALMS1Q8TCU4 4167 aa11.09□□□□□ -0.63
PRKN-203ENST00000366894 TRGV11A0A075B6L2 103 aa11.08□□□□□ -0.64
PRKN-203ENST00000366894 TRAV10A0A0B4J240 114 aa11.08□□□□□ -0.64
PRKN-203ENST00000366894 FABP5P3A8MUU1 101 aa11.08□□□□□ -0.64
PRKN-203ENST00000366894 PRB4P10163 310 aaPredicted RBP11.08□□□□□ -0.64
PRKN-203ENST00000366894 DAD1P61803 113 aa11.08□□□□□ -0.64
PRKN-203ENST00000366894 BTN1A1Q13410 526 aa11.08□□□□□ -0.64
PRKN-203ENST00000366894 TMEM183BQ1AE95 376 aa11.08□□□□□ -0.64
PRKN-203ENST00000366894 IBA57Q5T440 356 aaKnown RBP11.08□□□□□ -0.64
PRKN-203ENST00000366894 CEMP1Q6PRD7 247 aaPredicted RBP11.08□□□□□ -0.64
PRKN-203ENST00000366894 PHLDA1Q8WV24 401 aaPredicted RBP11.08□□□□□ -0.64
PRKN-203ENST00000366894 VAX2Q9UIW0 290 aa11.08□□□□□ -0.64
PRKN-203ENST00000366894 TRAV8-1A0A0A6YYK1 113 aa11.07□□□□□ -0.64
PRKN-203ENST00000366894 PFN1P07737 140 aaKnown RBP11.07□□□□□ -0.64
PRKN-203ENST00000366894 MEF2BQ02080 365 aaPredicted RBP11.07□□□□□ -0.64
PRKN-203ENST00000366894 DAZ2Q13117 558 aaKnown RBP11.07□□□□□ -0.64
PRKN-203ENST00000366894 FAM222AQ5U5X8 452 aa11.07□□□□□ -0.64
PRKN-203ENST00000366894 FAM210BQ96KR6 192 aa11.07□□□□□ -0.64
PRKN-203ENST00000366894 NANOS2P60321 138 aaKnown RBP11.06□□□□□ -0.64
PRKN-203ENST00000366894 KIR3DS1Q14943 382 aa11.06□□□□□ -0.64
PRKN-203ENST00000366894 TDRG1Q3Y452 100 aa11.06□□□□□ -0.64
PRKN-203ENST00000366894 RNASE8Q8TDE3 154 aaKnown RBP11.06□□□□□ -0.64
PRKN-203ENST00000366894 C2CD4CQ8TF44 421 aa11.06□□□□□ -0.64
PRKN-203ENST00000366894 SPXQ9BT56 116 aa11.06□□□□□ -0.64
PRKN-203ENST00000366894 SDF2L1Q9HCN8 221 aa11.06□□□□□ -0.64
PRKN-203ENST00000366894 BIN3Q9NQY0 253 aa11.06□□□□□ -0.64
PRKN-203ENST00000366894 GCGP01275 180 aa11.05□□□□□ -0.64
PRKN-203ENST00000366894 IGLV2-11P01706 119 aa11.05□□□□□ -0.64
PRKN-203ENST00000366894 AZU1P20160 251 aa11.05□□□□□ -0.64
PRKN-203ENST00000366894 ZNF415Q09FC8 603 aa11.05□□□□□ -0.64
PRKN-203ENST00000366894 LGALS9BQ3B8N2 356 aa11.05□□□□□ -0.64
PRKN-203ENST00000366894 TEX261Q6UWH6 196 aa11.05□□□□□ -0.64
PRKN-203ENST00000366894 SGK494Q96LW2 274 aa11.05□□□□□ -0.64
PRKN-203ENST00000366894 NDUFS6O75380 124 aaKnown RBP11.04□□□□□ -0.64
PRKN-203ENST00000366894 BCL2P10415 239 aa11.04□□□□□ -0.64
PRKN-203ENST00000366894 ATP5G3P48201 142 aa11.04□□□□□ -0.64
PRKN-203ENST00000366894 CCL20P78556 96 aa11.04□□□□□ -0.64
PRKN-203ENST00000366894 C12orf74Q32Q52 190 aa11.04□□□□□ -0.64
PRKN-203ENST00000366894 COX8CQ7Z4L0 72 aa11.04□□□□□ -0.64
PRKN-203ENST00000366894 SMIM12Q96EX1 92 aa11.04□□□□□ -0.64
PRKN-203ENST00000366894 NOP10Q9NPE3 64 aaKnown RBP11.04□□□□□ -0.64
PRKN-203ENST00000366894 TP53TG3Q9ULZ0 132 aa11.04□□□□□ -0.64
PRKN-203ENST00000366894 DEFB131BA0A096LNP1 70 aa11.03□□□□□ -0.64
PRKN-203ENST00000366894 TRAV34A0A0B4J273 112 aa11.03□□□□□ -0.64
PRKN-203ENST00000366894 RBFOX3A6NFN3 312 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms