RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 IFI27P40305 119 aaPredicted RBP17.33■□□□□ 0.36
LDB1-201ENST00000361198 ZNF80P51504 273 aaPredicted RBP17.33■□□□□ 0.36
LDB1-201ENST00000361198 LINC01356Q8N9X3 169 aa17.33■□□□□ 0.36
LDB1-201ENST00000361198 MAPK1IP1LQ8NDC0 245 aa17.33■□□□□ 0.36
LDB1-201ENST00000361198 SLC50A1Q9BRV3 221 aa17.33■□□□□ 0.36
LDB1-201ENST00000361198 KLK15Q9H2R5 256 aa17.33■□□□□ 0.36
LDB1-201ENST00000361198 A0A096LNJ9 63 aa17.32■□□□□ 0.36
LDB1-201ENST00000361198 ERCC8Q13216 396 aa17.32■□□□□ 0.36
LDB1-201ENST00000361198 TCF21O43680 179 aa17.32■□□□□ 0.36
LDB1-201ENST00000361198 RPS20P60866 119 aaKnown RBP17.32■□□□□ 0.36
LDB1-201ENST00000361198 MPV17L2Q567V2 206 aa17.32■□□□□ 0.36
LDB1-201ENST00000361198 AMN1Q8IY45 258 aa17.32■□□□□ 0.36
LDB1-201ENST00000361198 ORMDL3Q8N138 153 aa17.32■□□□□ 0.36
LDB1-201ENST00000361198 SIGLEC8Q9NYZ4 499 aa17.32■□□□□ 0.36
LDB1-201ENST00000361198 Q6ZVH6 145 aa17.31■□□□□ 0.36
LDB1-201ENST00000361198 ZNF575Q86XF7 245 aa17.31■□□□□ 0.36
LDB1-201ENST00000361198 ABCA12Q86UK0 2595 aa17.31■□□□□ 0.36
LDB1-201ENST00000361198 TRAV8-2A0A0B4J237 113 aa17.31■□□□□ 0.36
LDB1-201ENST00000361198 CCL25O15444 150 aa17.31■□□□□ 0.36
LDB1-201ENST00000361198 IGHV3-11P01762 117 aa17.31■□□□□ 0.36
LDB1-201ENST00000361198 BMI1P35226 326 aa17.31■□□□□ 0.36
LDB1-201ENST00000361198 SRSF2Q01130 221 aaKnown RBP17.31■□□□□ 0.36
LDB1-201ENST00000361198 FAM106AQ4KMX7 169 aa17.31■□□□□ 0.36
LDB1-201ENST00000361198 UNQ9165/PRO28630Q6UXU0 137 aa17.31■□□□□ 0.36
LDB1-201ENST00000361198 PRELID3AQ96N28 172 aa17.31■□□□□ 0.36
LDB1-201ENST00000361198 H3BUA1 57 aa17.3■□□□□ 0.36
LDB1-201ENST00000361198 BRI3O95415 125 aa17.3■□□□□ 0.36
LDB1-201ENST00000361198 IGLC6P0CF74 106 aa17.3■□□□□ 0.36
LDB1-201ENST00000361198 LCNL1Q6ZST4 164 aa17.3■□□□□ 0.36
LDB1-201ENST00000361198 H0Y8G0 127 aa17.3■□□□□ 0.36
LDB1-201ENST00000361198 PF4V1P10720 104 aa17.3■□□□□ 0.36
LDB1-201ENST00000361198 UBE2V1Q13404 147 aa17.3■□□□□ 0.36
LDB1-201ENST00000361198 MRPL51Q4U2R6 128 aaKnown RBP17.3■□□□□ 0.36
LDB1-201ENST00000361198 C8orf86Q6ZUL3 223 aa17.3■□□□□ 0.36
LDB1-201ENST00000361198 USMG5Q96IX5 58 aa17.3■□□□□ 0.36
LDB1-201ENST00000361198 PTTG1IPP53801 180 aa17.29■□□□□ 0.36
LDB1-201ENST00000361198 LOXL1Q08397 574 aaPredicted RBP17.29■□□□□ 0.36
LDB1-201ENST00000361198 BVES-AS1Q5T3Y7 98 aa17.29■□□□□ 0.36
LDB1-201ENST00000361198 PSMG3-AS1Q96PY0 264 aa17.29■□□□□ 0.36
LDB1-201ENST00000361198 PMCHL2Q9BQD1 86 aa17.29■□□□□ 0.36
LDB1-201ENST00000361198 NUDT3O95989 172 aa17.28■□□□□ 0.36
LDB1-201ENST00000361198 KRTAP10-9P60411 292 aa17.28■□□□□ 0.36
LDB1-201ENST00000361198 DEFB112Q30KQ8 113 aa17.28■□□□□ 0.36
LDB1-201ENST00000361198 TIMM8BQ9Y5J9 83 aaPredicted RBP17.28■□□□□ 0.36
LDB1-201ENST00000361198 NCR2O95944 276 aa17.28■□□□□ 0.36
LDB1-201ENST00000361198 TGFAP01135 160 aa17.28■□□□□ 0.36
LDB1-201ENST00000361198 C12orf54Q6X4T0 127 aa17.28■□□□□ 0.36
LDB1-201ENST00000361198 FER1L6-AS1Q8NA97 138 aa17.28■□□□□ 0.36
LDB1-201ENST00000361198 RBAKDNA6NC62 111 aa17.27■□□□□ 0.36
LDB1-201ENST00000361198 NDUFA4O00483 81 aa17.27■□□□□ 0.35
LDB1-201ENST00000361198 IGLV1-40P01703 118 aa17.27■□□□□ 0.35
LDB1-201ENST00000361198 IGHV4-59P01825 116 aa17.27■□□□□ 0.35
LDB1-201ENST00000361198 COX8AP10176 69 aa17.27■□□□□ 0.35
LDB1-201ENST00000361198 GLMPQ8WWB7 406 aa17.27■□□□□ 0.35
LDB1-201ENST00000361198 DPF1Q92782 380 aa17.27■□□□□ 0.35
LDB1-201ENST00000361198 CNFNQ9BYD5 112 aa17.27■□□□□ 0.35
LDB1-201ENST00000361198 NAV2Q8IVL1 2488 aa17.26■□□□□ 0.35
LDB1-201ENST00000361198 LOC389332A0A1B0GUA5 103 aa17.26■□□□□ 0.35
LDB1-201ENST00000361198 SMAD7O15105 426 aaKnown RBP17.26■□□□□ 0.35
LDB1-201ENST00000361198 IL17RELQ6ZVW7 336 aa17.26■□□□□ 0.35
LDB1-201ENST00000361198 HIST1H1AQ02539 215 aaPredicted RBP17.25■□□□□ 0.35
LDB1-201ENST00000361198 TMEM95Q3KNT9 176 aa17.25■□□□□ 0.35
LDB1-201ENST00000361198 OR4X2Q8NGF9 303 aa17.25■□□□□ 0.35
LDB1-201ENST00000361198 AGPAT4-IT1Q9H0P7 198 aa17.25■□□□□ 0.35
LDB1-201ENST00000361198 RNF223E7ERA6 249 aa17.24■□□□□ 0.35
LDB1-201ENST00000361198 CFHR3Q02985 330 aa17.24■□□□□ 0.35
LDB1-201ENST00000361198 DEFB125Q8N687 156 aa17.24■□□□□ 0.35
LDB1-201ENST00000361198 MUC21A0A0G2JKD1 596 aa17.24■□□□□ 0.35
LDB1-201ENST00000361198 MUC21A0A140T8X8 626 aa17.24■□□□□ 0.35
LDB1-201ENST00000361198 TWIST1Q15672 202 aa17.24■□□□□ 0.35
LDB1-201ENST00000361198 LGALS9BQ3B8N2 356 aa17.24■□□□□ 0.35
LDB1-201ENST00000361198 MUC21Q5SSG8 566 aa17.24■□□□□ 0.35
LDB1-201ENST00000361198 LGALS9CQ6DKI2 356 aa17.24■□□□□ 0.35
LDB1-201ENST00000361198 FABP5P3A8MUU1 101 aa17.23■□□□□ 0.35
LDB1-201ENST00000361198 NPFFR1Q9GZQ6 430 aa17.23■□□□□ 0.35
LDB1-201ENST00000361198 J3QLI3 93 aa17.23■□□□□ 0.35
LDB1-201ENST00000361198 TAX1BP3O14907 124 aa17.23■□□□□ 0.35
LDB1-201ENST00000361198 CKS2P33552 79 aa17.23■□□□□ 0.35
LDB1-201ENST00000361198 MRPL53Q96EL3 112 aaKnown RBP17.23■□□□□ 0.35
LDB1-201ENST00000361198 C16orf92Q96LL3 132 aa17.23■□□□□ 0.35
LDB1-201ENST00000361198 NPYP01303 97 aa17.22■□□□□ 0.35
LDB1-201ENST00000361198 HBDP02042 147 aa17.22■□□□□ 0.35
LDB1-201ENST00000361198 ORM1P02763 201 aa17.22■□□□□ 0.35
LDB1-201ENST00000361198 OR8A1Q8NGG7 326 aa17.22■□□□□ 0.35
LDB1-201ENST00000361198 C2orf91Q6ZV80 131 aa17.22■□□□□ 0.35
LDB1-201ENST00000361198 A0A0G2JLM5 398 aa17.21■□□□□ 0.35
LDB1-201ENST00000361198 GPHB5Q86YW7 130 aa17.21■□□□□ 0.35
LDB1-201ENST00000361198 CR1P17927 2039 aa17.21■□□□□ 0.34
LDB1-201ENST00000361198 LINC01559Q495D7 138 aa17.21■□□□□ 0.34
LDB1-201ENST00000361198 TMEM78Q5T7P6 136 aa17.21■□□□□ 0.34
LDB1-201ENST00000361198 RNF185Q96GF1 192 aa17.21■□□□□ 0.34
LDB1-201ENST00000361198 MXRA5Q9NR99 2828 aa17.2■□□□□ 0.34
LDB1-201ENST00000361198 PPBPP02775 128 aa17.19■□□□□ 0.34
LDB1-201ENST00000361198 OR1N2Q8NGR9 330 aa17.19■□□□□ 0.34
LDB1-201ENST00000361198 C20orf173Q96LM9 149 aa17.19■□□□□ 0.34
LDB1-201ENST00000361198 CREBBPQ92793 2442 aa17.19■□□□□ 0.34
LDB1-201ENST00000361198 NBPF19A0A087WUL8 3843 aa17.19■□□□□ 0.34
LDB1-201ENST00000361198 LINC01546A6NGU7 62 aa17.19■□□□□ 0.34
LDB1-201ENST00000361198 FGF6P10767 208 aa17.19■□□□□ 0.34
LDB1-201ENST00000361198 C9orf47Q6ZRZ4 202 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms