RNA–Protein interactions for RNA: ENST00000316881.8

TRIM25-201, Transcript of tripartite motif containing 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM25, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-201ENST00000316881 NOTCH4Q99466 2003 aa11.34□□□□□ -0.59
TRIM25-201ENST00000316881 C3orf79P0CE67 100 aa11.33□□□□□ -0.6
TRIM25-201ENST00000316881 ZNF625Q96I27 306 aaPredicted RBP11.33□□□□□ -0.6
TRIM25-201ENST00000316881 SPAG8Q99932 426 aaPredicted RBP11.33□□□□□ -0.6
TRIM25-201ENST00000316881 PFN2P35080 140 aa11.33□□□□□ -0.6
TRIM25-201ENST00000316881 C2orf82Q6UX34 121 aa11.33□□□□□ -0.6
TRIM25-201ENST00000316881 MEGF9Q9H1U4 602 aa11.33□□□□□ -0.6
TRIM25-201ENST00000316881 PLXNB3Q9ULL4 1909 aa11.33□□□□□ -0.6
TRIM25-201ENST00000316881 DAZAP2Q15038 168 aaPredicted RBP11.33□□□□□ -0.6
TRIM25-201ENST00000316881 FAM104BQ5XKR9 115 aa11.33□□□□□ -0.6
TRIM25-201ENST00000316881 KIAA1671Q9BY89 1806 aa11.33□□□□□ -0.6
TRIM25-201ENST00000316881 CENPVL3A0A0U1RRI6 287 aa11.33□□□□□ -0.6
TRIM25-201ENST00000316881 IGLV3-1P01715 115 aa11.33□□□□□ -0.6
TRIM25-201ENST00000316881 DIAPH2-AS1Q14236 149 aa11.33□□□□□ -0.6
TRIM25-201ENST00000316881 Q8N8P6 123 aa11.33□□□□□ -0.6
TRIM25-201ENST00000316881 OR11H6Q8NGC7 330 aa11.33□□□□□ -0.6
TRIM25-201ENST00000316881 IGHV3-38A0A0C4DH36 116 aa11.32□□□□□ -0.6
TRIM25-201ENST00000316881 HLA-DRB4P13762 266 aa11.32□□□□□ -0.6
TRIM25-201ENST00000316881 GP9P14770 177 aa11.32□□□□□ -0.6
TRIM25-201ENST00000316881 HLA-DRB4X5D2U9 266 aa11.32□□□□□ -0.6
TRIM25-201ENST00000316881 NDUFS6O75380 124 aaKnown RBP11.32□□□□□ -0.6
TRIM25-201ENST00000316881 IGLC1P0CG04 106 aa11.32□□□□□ -0.6
TRIM25-201ENST00000316881 C10orf105Q8TEF2 133 aa11.32□□□□□ -0.6
TRIM25-201ENST00000316881 YLPM1P49750 1951 aaKnown RBP11.32□□□□□ -0.6
TRIM25-201ENST00000316881 A0A096LPF7 62 aa11.32□□□□□ -0.6
TRIM25-201ENST00000316881 HIST1H4AP62805 103 aaKnown RBP11.32□□□□□ -0.6
TRIM25-201ENST00000316881 ZNF124Q15973 351 aa11.32□□□□□ -0.6
TRIM25-201ENST00000316881 ZNF114Q8NC26 417 aa11.32□□□□□ -0.6
TRIM25-201ENST00000316881 CTSZQ9UBR2 303 aa11.32□□□□□ -0.6
TRIM25-201ENST00000316881 IGHV1-24A0A0C4DH33 117 aa11.32□□□□□ -0.6
TRIM25-201ENST00000316881 PIFOQ8TCI5 191 aa11.31□□□□□ -0.6
TRIM25-201ENST00000316881 IGKV2D-24A0A075B6R9 120 aa11.31□□□□□ -0.6
TRIM25-201ENST00000316881 MRPL53Q96EL3 112 aaKnown RBP11.31□□□□□ -0.6
TRIM25-201ENST00000316881 DENND4CQ5VZ89 1909 aa11.31□□□□□ -0.6
TRIM25-201ENST00000316881 PYGO2Q9BRQ0 406 aa11.31□□□□□ -0.6
TRIM25-201ENST00000316881 DOCK9Q9BZ29 2069 aa11.31□□□□□ -0.6
TRIM25-201ENST00000316881 PRSS29PA6NIE9 313 aa11.3□□□□□ -0.6
TRIM25-201ENST00000316881 TRAV8-3A0A0A6YYJ7 113 aa11.3□□□□□ -0.6
TRIM25-201ENST00000316881 POU2AF1Q16633 256 aa11.3□□□□□ -0.6
TRIM25-201ENST00000316881 DKK4Q9UBT3 224 aa11.3□□□□□ -0.6
TRIM25-201ENST00000316881 PCNX1Q96RV3 2341 aa11.3□□□□□ -0.6
TRIM25-201ENST00000316881 MUC6Q6W4X9 2439 aa11.3□□□□□ -0.6
TRIM25-201ENST00000316881 hDV102S1A0JD36 115 aa11.3□□□□□ -0.6
TRIM25-201ENST00000316881 NOP10Q9NPE3 64 aaKnown RBP11.3□□□□□ -0.6
TRIM25-201ENST00000316881 ADORA2A-AS1P86434 159 aa11.3□□□□□ -0.6
TRIM25-201ENST00000316881 IL15RAQ13261 267 aa11.3□□□□□ -0.6
TRIM25-201ENST00000316881 IGHV4-38-2P0DP08 117 aa11.3□□□□□ -0.6
TRIM25-201ENST00000316881 IGKV1OR2-108A0A075B7D4 117 aa11.29□□□□□ -0.6
TRIM25-201ENST00000316881 A0A0J9YY99 117 aa11.29□□□□□ -0.6
TRIM25-201ENST00000316881 CCL18P55774 89 aa11.29□□□□□ -0.6
TRIM25-201ENST00000316881 DEFB136Q30KP8 78 aa11.29□□□□□ -0.6
TRIM25-201ENST00000316881 H3BMM0 161 aa11.29□□□□□ -0.6
TRIM25-201ENST00000316881 NXPH4O95158 308 aa11.29□□□□□ -0.6
TRIM25-201ENST00000316881 UBE2BP63146 152 aa11.29□□□□□ -0.6
TRIM25-201ENST00000316881 FAM208BQ5VWN6 2430 aa11.28□□□□□ -0.6
TRIM25-201ENST00000316881 SPART-AS1P0CW21 52 aa11.28□□□□□ -0.6
TRIM25-201ENST00000316881 GAGE2EQ4V326 116 aa11.28□□□□□ -0.6
TRIM25-201ENST00000316881 CYYR1Q96J86 154 aa11.28□□□□□ -0.6
TRIM25-201ENST00000316881 GAGE2DQ9UEU5 116 aa11.28□□□□□ -0.6
TRIM25-201ENST00000316881 DLEU1O43261 78 aa11.28□□□□□ -0.6
TRIM25-201ENST00000316881 ZNF491Q8N8L2 437 aa11.28□□□□□ -0.6
TRIM25-201ENST00000316881 HERVK_113P63121 156 aa11.27□□□□□ -0.61
TRIM25-201ENST00000316881 POLR3KQ9Y2Y1 108 aaPredicted RBP11.27□□□□□ -0.61
TRIM25-201ENST00000316881 U3KQE9 123 aa11.27□□□□□ -0.61
TRIM25-201ENST00000316881 A8MWP6 167 aa11.27□□□□□ -0.61
TRIM25-201ENST00000316881 PLA2G5P39877 138 aa11.27□□□□□ -0.61
TRIM25-201ENST00000316881 Q0VG73 95 aa11.27□□□□□ -0.61
TRIM25-201ENST00000316881 C1orf43Q9BWL3 253 aa11.27□□□□□ -0.61
TRIM25-201ENST00000316881 ZNF48Q96MX3 618 aaPredicted RBP11.26□□□□□ -0.61
TRIM25-201ENST00000316881 EDA2RQ9HAV5 297 aa11.26□□□□□ -0.61
TRIM25-201ENST00000316881 SLURP1P55000 103 aa11.26□□□□□ -0.61
TRIM25-201ENST00000316881 RBMY1FQ15415 496 aaKnown RBP11.26□□□□□ -0.61
TRIM25-201ENST00000316881 SH2D6Q7Z4S9 175 aa11.26□□□□□ -0.61
TRIM25-201ENST00000316881 ZFHX2Q9C0A1 2572 aaPredicted RBP11.26□□□□□ -0.61
TRIM25-201ENST00000316881 NUP210Q8TEM1 1887 aaPredicted RBP11.26□□□□□ -0.61
TRIM25-201ENST00000316881 FAM231DQ6ZW35 169 aa11.26□□□□□ -0.61
TRIM25-201ENST00000316881 RNF152Q8N8N0 203 aa11.26□□□□□ -0.61
TRIM25-201ENST00000316881 ATP5G1P05496 136 aa11.26□□□□□ -0.61
TRIM25-201ENST00000316881 MRPL51Q4U2R6 128 aaKnown RBP11.26□□□□□ -0.61
TRIM25-201ENST00000316881 MRPL23Q16540 153 aaKnown RBP11.25□□□□□ -0.61
TRIM25-201ENST00000316881 TAL2Q16559 108 aa11.25□□□□□ -0.61
TRIM25-201ENST00000316881 ZNF493Q6ZR52 646 aa11.25□□□□□ -0.61
TRIM25-201ENST00000316881 LENEPQ9Y5L5 61 aa11.25□□□□□ -0.61
TRIM25-201ENST00000316881 Q9HAA7 133 aa11.25□□□□□ -0.61
TRIM25-201ENST00000316881 WIPF2Q8TF74 440 aaPredicted RBP11.25□□□□□ -0.61
TRIM25-201ENST00000316881 A0A087X0K7 114 aa11.24□□□□□ -0.61
TRIM25-201ENST00000316881 MPV17L2Q567V2 206 aa11.24□□□□□ -0.61
TRIM25-201ENST00000316881 NRGNQ92686 78 aa11.24□□□□□ -0.61
TRIM25-201ENST00000316881 ICOSQ9Y6W8 199 aa11.24□□□□□ -0.61
TRIM25-201ENST00000316881 TRAV26-2A0A0B4J265 109 aa11.24□□□□□ -0.61
TRIM25-201ENST00000316881 PRSS57Q6UWY2 283 aa11.24□□□□□ -0.61
TRIM25-201ENST00000316881 NPBQ8NG41 125 aa11.24□□□□□ -0.61
TRIM25-201ENST00000316881 C16orf74Q96GX8 76 aa11.24□□□□□ -0.61
TRIM25-201ENST00000316881 IGLC7A0M8Q6 106 aa11.24□□□□□ -0.61
TRIM25-201ENST00000316881 MYCNOSP40205 109 aa11.24□□□□□ -0.61
TRIM25-201ENST00000316881 C11orf53Q8IXP5 236 aa11.24□□□□□ -0.61
TRIM25-201ENST00000316881 LYPD6BQ8NI32 183 aa11.24□□□□□ -0.61
TRIM25-201ENST00000316881 UBE2WQ96B02 151 aa11.24□□□□□ -0.61
TRIM25-201ENST00000316881 NDUFA12Q9UI09 145 aa11.24□□□□□ -0.61
TRIM25-201ENST00000316881 PTPRQQ9UMZ3 2332 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms