RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 LGALS1P09382 135 aaKnown RBP17.05■□□□□ 0.32
PDLIM2-202ENST00000308354 SMPXQ9UHP9 88 aa17.05■□□□□ 0.32
PDLIM2-202ENST00000308354 ZNF705DP0CH99 300 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-202ENST00000308354 ZNF705BP0CI00 300 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-202ENST00000308354 NTF3P20783 257 aa17.04■□□□□ 0.32
PDLIM2-202ENST00000308354 Q6ZSV7 163 aa17.04■□□□□ 0.32
PDLIM2-202ENST00000308354 TMEM86BQ8N661 226 aa17.04■□□□□ 0.32
PDLIM2-202ENST00000308354 UBE2E2Q96LR5 201 aa17.04■□□□□ 0.32
PDLIM2-202ENST00000308354 LOC102724200A0A096LPH7 203 aaPredicted RBP17.04■□□□□ 0.32
PDLIM2-202ENST00000308354 DEFB136Q30KP8 78 aa17.04■□□□□ 0.32
PDLIM2-202ENST00000308354 DDTP30046 118 aa17.03■□□□□ 0.32
PDLIM2-202ENST00000308354 SYNJ2BPP57105 145 aa17.03■□□□□ 0.32
PDLIM2-202ENST00000308354 DEFB1P60022 68 aa17.03■□□□□ 0.32
PDLIM2-202ENST00000308354 RIGQ13278 110 aa17.03■□□□□ 0.32
PDLIM2-202ENST00000308354 Q6AWC8 147 aa17.03■□□□□ 0.32
PDLIM2-202ENST00000308354 ANK3Q12955 4377 aaKnown RBP17.03■□□□□ 0.32
PDLIM2-202ENST00000308354 KRTDAPP60985 99 aa17.02■□□□□ 0.32
PDLIM2-202ENST00000308354 RNASEKQ6P5S7 137 aaKnown RBP17.02■□□□□ 0.32
PDLIM2-202ENST00000308354 NIT1Q86X76 327 aa17.02■□□□□ 0.32
PDLIM2-202ENST00000308354 NDFIP1Q9BT67 221 aa17.02■□□□□ 0.32
PDLIM2-202ENST00000308354 AGPAT4-IT1Q9H0P7 198 aa17.02■□□□□ 0.32
PDLIM2-202ENST00000308354 RNF152Q8N8N0 203 aa17.02■□□□□ 0.32
PDLIM2-202ENST00000308354 RBAKDNA6NC62 111 aa17.01■□□□□ 0.31
PDLIM2-202ENST00000308354 SSTP61278 116 aa17.01■□□□□ 0.31
PDLIM2-202ENST00000308354 TCTEX1D4Q5JR98 221 aa17.01■□□□□ 0.31
PDLIM2-202ENST00000308354 LYZL1Q6UWQ5 148 aa17.01■□□□□ 0.31
PDLIM2-202ENST00000308354 OTOGQ6ZRI0 2925 aa17.01■□□□□ 0.31
PDLIM2-202ENST00000308354 TMEM213A2RRL7 107 aa17.01■□□□□ 0.31
PDLIM2-202ENST00000308354 K7EMT4 169 aa17.01■□□□□ 0.31
PDLIM2-202ENST00000308354 M0QZ24 198 aa17.01■□□□□ 0.31
PDLIM2-202ENST00000308354 ZNF738Q8NE65 137 aa17.01■□□□□ 0.31
PDLIM2-202ENST00000308354 URB1-AS1Q96HZ7 61 aa17.01■□□□□ 0.31
PDLIM2-202ENST00000308354 SOCS3O14543 225 aa17■□□□□ 0.31
PDLIM2-202ENST00000308354 HSBP1O75506 76 aa17■□□□□ 0.31
PDLIM2-202ENST00000308354 HOXD3P31249 432 aaPredicted RBP17■□□□□ 0.31
PDLIM2-202ENST00000308354 BMI1P35226 326 aa17■□□□□ 0.31
PDLIM2-202ENST00000308354 KHDC1LQ5JSQ8 128 aa17■□□□□ 0.31
PDLIM2-202ENST00000308354 UFC1Q9Y3C8 167 aa17■□□□□ 0.31
PDLIM2-202ENST00000308354 BORCS7Q96B45 105 aa17■□□□□ 0.31
PDLIM2-202ENST00000308354 MUC21A0A0G2JKD1 596 aa16.99■□□□□ 0.31
PDLIM2-202ENST00000308354 MUC21A0A140T8X8 626 aa16.99■□□□□ 0.31
PDLIM2-202ENST00000308354 MUC21Q5SSG8 566 aa16.99■□□□□ 0.31
PDLIM2-202ENST00000308354 DEFA6Q01524 100 aa16.98■□□□□ 0.31
PDLIM2-202ENST00000308354 DUX3Q96PT4 197 aa16.98■□□□□ 0.31
PDLIM2-202ENST00000308354 SETD2Q9BYW2 2564 aaPredicted RBP16.98■□□□□ 0.31
PDLIM2-202ENST00000308354 A0A1B0GW15 77 aa16.98■□□□□ 0.31
PDLIM2-202ENST00000308354 TDRG1Q3Y452 100 aa16.98■□□□□ 0.31
PDLIM2-202ENST00000308354 TMEM78Q5T7P6 136 aa16.98■□□□□ 0.31
PDLIM2-202ENST00000308354 ZNF575Q86XF7 245 aa16.98■□□□□ 0.31
PDLIM2-202ENST00000308354 WFDC3Q8IUB2 231 aa16.98■□□□□ 0.31
PDLIM2-202ENST00000308354 GATD1Q8NB37 220 aa16.98■□□□□ 0.31
PDLIM2-202ENST00000308354 MRPL53Q96EL3 112 aaKnown RBP16.98■□□□□ 0.31
PDLIM2-202ENST00000308354 ORM1P02763 201 aa16.97■□□□□ 0.31
PDLIM2-202ENST00000308354 C11orf44Q8N8P7 122 aa16.97■□□□□ 0.31
PDLIM2-202ENST00000308354 Q8N976 141 aa16.97■□□□□ 0.31
PDLIM2-202ENST00000308354 FABP5P3A8MUU1 101 aa16.96■□□□□ 0.31
PDLIM2-202ENST00000308354 F6UB75 175 aa16.96■□□□□ 0.31
PDLIM2-202ENST00000308354 M0R2Z0 102 aa16.96■□□□□ 0.31
PDLIM2-202ENST00000308354 SLURP1P55000 103 aa16.96■□□□□ 0.31
PDLIM2-202ENST00000308354 TEX43Q6ZNM6 134 aa16.96■□□□□ 0.31
PDLIM2-202ENST00000308354 HIVEP2P31629 2446 aa16.96■□□□□ 0.31
PDLIM2-202ENST00000308354 C3orf79P0CE67 100 aa16.96■□□□□ 0.3
PDLIM2-202ENST00000308354 ZNF138P52744 262 aa16.96■□□□□ 0.3
PDLIM2-202ENST00000308354 TFPI2P48307 235 aa16.95■□□□□ 0.3
PDLIM2-202ENST00000308354 RPS20P60866 119 aaKnown RBP16.95■□□□□ 0.3
PDLIM2-202ENST00000308354 FER1L6-AS1Q8NA97 138 aa16.95■□□□□ 0.3
PDLIM2-202ENST00000308354 C14orf144Q96I85 54 aa16.95■□□□□ 0.3
PDLIM2-202ENST00000308354 PMCHL1Q16048 86 aa16.94■□□□□ 0.3
PDLIM2-202ENST00000308354 C9orf47Q6ZRZ4 202 aa16.94■□□□□ 0.3
PDLIM2-202ENST00000308354 CTRLP40313 264 aa16.94■□□□□ 0.3
PDLIM2-202ENST00000308354 ZNF493Q6ZR52 646 aa16.94■□□□□ 0.3
PDLIM2-202ENST00000308354 OR11H1Q8NG94 326 aa16.94■□□□□ 0.3
PDLIM2-202ENST00000308354 CLEC5AQ9NY25 188 aa16.94■□□□□ 0.3
PDLIM2-202ENST00000308354 IGLC6P0CF74 106 aa16.93■□□□□ 0.3
PDLIM2-202ENST00000308354 Q6ZQT7 251 aa16.93■□□□□ 0.3
PDLIM2-202ENST00000308354 KIR2DL5BA0A0G2JN68 375 aa16.93■□□□□ 0.3
PDLIM2-202ENST00000308354 KIR2DL5BA0A0G2JPC4 375 aa16.93■□□□□ 0.3
PDLIM2-202ENST00000308354 J3KRW8 73 aa16.93■□□□□ 0.3
PDLIM2-202ENST00000308354 REC114Q7Z4M0 266 aa16.93■□□□□ 0.3
PDLIM2-202ENST00000308354 KIR2DL5AQ8N109 375 aa16.93■□□□□ 0.3
PDLIM2-202ENST00000308354 LY6G6DO95868 133 aa16.92■□□□□ 0.3
PDLIM2-202ENST00000308354 SRSF2Q01130 221 aaKnown RBP16.92■□□□□ 0.3
PDLIM2-202ENST00000308354 DCANP1Q8TF63 244 aa16.92■□□□□ 0.3
PDLIM2-202ENST00000308354 LINC01559Q495D7 138 aa16.92■□□□□ 0.3
PDLIM2-202ENST00000308354 KLHL30-AS1Q8NEE0 82 aa16.92■□□□□ 0.3
PDLIM2-202ENST00000308354 LGALS9O00182 355 aa16.91■□□□□ 0.3
PDLIM2-202ENST00000308354 CSN3P07498 182 aa16.91■□□□□ 0.3
PDLIM2-202ENST00000308354 CHCHD1Q96BP2 118 aaKnown RBP16.91■□□□□ 0.3
PDLIM2-202ENST00000308354 MS4A6AQ9H2W1 248 aa16.91■□□□□ 0.3
PDLIM2-202ENST00000308354 C2orf70A6NJV1 201 aa16.9■□□□□ 0.3
PDLIM2-202ENST00000308354 LINC00614P0C842 121 aa16.9■□□□□ 0.3
PDLIM2-202ENST00000308354 HIST1H1AQ02539 215 aaPredicted RBP16.9■□□□□ 0.3
PDLIM2-202ENST00000308354 AMN1Q8IY45 258 aa16.9■□□□□ 0.3
PDLIM2-202ENST00000308354 OR10J6PQ8NGY7 276 aa16.9■□□□□ 0.3
PDLIM2-202ENST00000308354 C11orf21Q9P2W6 132 aa16.9■□□□□ 0.3
PDLIM2-202ENST00000308354 PAM16Q9Y3D7 125 aa16.9■□□□□ 0.3
PDLIM2-202ENST00000308354 IGHV1-24A0A0C4DH33 117 aa16.9■□□□□ 0.3
PDLIM2-202ENST00000308354 TWIST1Q15672 202 aa16.9■□□□□ 0.3
PDLIM2-202ENST00000308354 EBLN2Q6P2I7 272 aa16.9■□□□□ 0.3
PDLIM2-202ENST00000308354 C4orf3Q8WVX3 66 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms