RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 PEX7O00628 323 aa19.25■□□□□ 0.67
SSU72-201ENST00000291386 PAGE4O60829 102 aa19.25■□□□□ 0.67
SSU72-201ENST00000291386 SPART-AS1P0CW21 52 aa19.25■□□□□ 0.67
SSU72-201ENST00000291386 Q6AWC8 147 aa19.25■□□□□ 0.67
SSU72-201ENST00000291386 TMEM263Q8WUH6 116 aaKnown RBP19.25■□□□□ 0.67
SSU72-201ENST00000291386 TVP23CQ96ET8 276 aa19.25■□□□□ 0.67
SSU72-201ENST00000291386 DKK2Q9UBU2 259 aa19.25■□□□□ 0.67
SSU72-201ENST00000291386 PSG8Q9UQ74 426 aa19.25■□□□□ 0.67
SSU72-201ENST00000291386 EMP1P54849 157 aa19.24■□□□□ 0.67
SSU72-201ENST00000291386 FLI1Q01543 452 aaPredicted RBP19.24■□□□□ 0.67
SSU72-201ENST00000291386 RNASE8Q8TDE3 154 aaKnown RBP19.24■□□□□ 0.67
SSU72-201ENST00000291386 BOLA1Q9Y3E2 137 aa19.24■□□□□ 0.67
SSU72-201ENST00000291386 HTN1P15515 57 aa19.23■□□□□ 0.67
SSU72-201ENST00000291386 CST9LP1Q5W188 147 aa19.23■□□□□ 0.67
SSU72-201ENST00000291386 SGK494Q96LW2 274 aa19.23■□□□□ 0.67
SSU72-201ENST00000291386 NDFIP1Q9BT67 221 aa19.23■□□□□ 0.67
SSU72-201ENST00000291386 TREM1Q9NP99 234 aa19.23■□□□□ 0.67
SSU72-201ENST00000291386 NUPR2A6NF83 97 aa19.22■□□□□ 0.67
SSU72-201ENST00000291386 F6UZH7 168 aa19.22■□□□□ 0.67
SSU72-201ENST00000291386 ATP5G3P48201 142 aa19.22■□□□□ 0.67
SSU72-201ENST00000291386 CCL20P78556 96 aa19.22■□□□□ 0.67
SSU72-201ENST00000291386 PMS2P11Q13670 270 aa19.22■□□□□ 0.67
SSU72-201ENST00000291386 C12orf74Q32Q52 190 aa19.22■□□□□ 0.67
SSU72-201ENST00000291386 ANXA2RQ3ZCQ2 193 aa19.22■□□□□ 0.67
SSU72-201ENST00000291386 FAM222AQ5U5X8 452 aa19.22■□□□□ 0.67
SSU72-201ENST00000291386 LYRM9A8MSI8 78 aa19.21■□□□□ 0.67
SSU72-201ENST00000291386 ALKAL2Q6UX46 152 aa19.21■□□□□ 0.67
SSU72-201ENST00000291386 EIF4E3Q8N5X7 224 aaKnown RBP19.21■□□□□ 0.67
SSU72-201ENST00000291386 PHLDA1Q8WV24 401 aaPredicted RBP19.21■□□□□ 0.67
SSU72-201ENST00000291386 MANBALQ9NQG1 85 aa19.21■□□□□ 0.67
SSU72-201ENST00000291386 C11orf94C9JXX5 98 aa19.2■□□□□ 0.66
SSU72-201ENST00000291386 SAPCD1Q5SSQ6 148 aa19.2■□□□□ 0.66
SSU72-201ENST00000291386 CEMP1Q6PRD7 247 aaPredicted RBP19.2■□□□□ 0.66
SSU72-201ENST00000291386 LINC00479Q96M42 142 aa19.2■□□□□ 0.66
SSU72-201ENST00000291386 IGHV1OR15-1A0A075B7D0 117 aa19.19■□□□□ 0.66
SSU72-201ENST00000291386 Q6ZQT7 251 aa19.19■□□□□ 0.66
SSU72-201ENST00000291386 KLF12Q9Y4X4 402 aa19.19■□□□□ 0.66
SSU72-201ENST00000291386 DYNC2H1Q8NCM8 4307 aaKnown RBP19.18■□□□□ 0.66
SSU72-201ENST00000291386 TRBV6-1A0A0K0K1D8 114 aa19.18■□□□□ 0.66
SSU72-201ENST00000291386 RGS13O14921 159 aa19.18■□□□□ 0.66
SSU72-201ENST00000291386 Q6ZTC4 211 aa19.18■□□□□ 0.66
SSU72-201ENST00000291386 PRNTQ86SH4 94 aa19.18■□□□□ 0.66
SSU72-201ENST00000291386 ZNF680Q8NEM1 530 aa19.18■□□□□ 0.66
SSU72-201ENST00000291386 TXNDC17Q9BRA2 123 aa19.18■□□□□ 0.66
SSU72-201ENST00000291386 TIMM8BQ9Y5J9 83 aaPredicted RBP19.18■□□□□ 0.66
SSU72-201ENST00000291386 TRAV34A0A0B4J273 112 aa19.17■□□□□ 0.66
SSU72-201ENST00000291386 BLOC1S1P78537 153 aa19.17■□□□□ 0.66
SSU72-201ENST00000291386 FMC1Q96HJ9 113 aa19.17■□□□□ 0.66
SSU72-201ENST00000291386 GNG13Q9P2W3 67 aa19.17■□□□□ 0.66
SSU72-201ENST00000291386 TRAV21A0A0B4J279 112 aa19.16■□□□□ 0.66
SSU72-201ENST00000291386 C11orf72Q8NBR9 251 aa19.16■□□□□ 0.66
SSU72-201ENST00000291386 C8orf49Q96NF6 230 aa19.16■□□□□ 0.66
SSU72-201ENST00000291386 TRAV10A0A0B4J240 114 aa19.15■□□□□ 0.66
SSU72-201ENST00000291386 CBY3A6NI87 242 aa19.15■□□□□ 0.66
SSU72-201ENST00000291386 IBA57Q5T440 356 aaKnown RBP19.15■□□□□ 0.66
SSU72-201ENST00000291386 Q86TA4 180 aa19.15■□□□□ 0.66
SSU72-201ENST00000291386 KLK5Q9Y337 293 aaPredicted RBP19.15■□□□□ 0.66
SSU72-201ENST00000291386 TMEM183BQ1AE95 376 aa19.14■□□□□ 0.65
SSU72-201ENST00000291386 TDRG1Q3Y452 100 aa19.14■□□□□ 0.65
SSU72-201ENST00000291386 SMUG1Q53HV7 270 aa19.14■□□□□ 0.65
SSU72-201ENST00000291386 ZNF767PQ75MW2 155 aa19.14■□□□□ 0.65
SSU72-201ENST00000291386 COX8CQ7Z4L0 72 aa19.14■□□□□ 0.65
SSU72-201ENST00000291386 C2CD4CQ8TF44 421 aa19.14■□□□□ 0.65
SSU72-201ENST00000291386 ZFP30Q9Y2G7 519 aa19.14■□□□□ 0.65
SSU72-201ENST00000291386 SNURFLB1AK76 121 aa19.13■□□□□ 0.65
SSU72-201ENST00000291386 IFNA1P01562 189 aa19.13■□□□□ 0.65
SSU72-201ENST00000291386 S100A9P06702 114 aaKnown RBP19.13■□□□□ 0.65
SSU72-201ENST00000291386 AKR1C3P42330 323 aa19.13■□□□□ 0.65
SSU72-201ENST00000291386 UBE2G1P62253 170 aa19.13■□□□□ 0.65
SSU72-201ENST00000291386 DAZ2Q13117 558 aaKnown RBP19.13■□□□□ 0.65
SSU72-201ENST00000291386 LYPD6BQ8NI32 183 aa19.13■□□□□ 0.65
SSU72-201ENST00000291386 NOP10Q9NPE3 64 aaKnown RBP19.13■□□□□ 0.65
SSU72-201ENST00000291386 ZNF80P51504 273 aaPredicted RBP19.12■□□□□ 0.65
SSU72-201ENST00000291386 DAD1P61803 113 aa19.12■□□□□ 0.65
SSU72-201ENST00000291386 FAM159AQ6UWV7 190 aa19.12■□□□□ 0.65
SSU72-201ENST00000291386 LINC00612Q8N6U2 182 aa19.12■□□□□ 0.65
SSU72-201ENST00000291386 TP53TG3Q9ULZ0 132 aa19.12■□□□□ 0.65
SSU72-201ENST00000291386 SCO2A0A1W2PP80 73 aa19.11■□□□□ 0.65
SSU72-201ENST00000291386 GCGP01275 180 aa19.11■□□□□ 0.65
SSU72-201ENST00000291386 PFN1P07737 140 aaKnown RBP19.11■□□□□ 0.65
SSU72-201ENST00000291386 TAGLN2P37802 199 aaKnown RBP19.11■□□□□ 0.65
SSU72-201ENST00000291386 MUC21Q5SSG8 566 aa19.11■□□□□ 0.65
SSU72-201ENST00000291386 LTAP01374 205 aa19.1■□□□□ 0.65
SSU72-201ENST00000291386 TCL1AP56279 114 aa19.1■□□□□ 0.65
SSU72-201ENST00000291386 C11orf52Q96A22 123 aa19.1■□□□□ 0.65
SSU72-201ENST00000291386 GSN-AS1Q9NRJ2 163 aa19.1■□□□□ 0.65
SSU72-201ENST00000291386 TENM2Q9NT68 2774 aa19.1■□□□□ 0.65
SSU72-201ENST00000291386 BCL2P10415 239 aa19.09■□□□□ 0.65
SSU72-201ENST00000291386 MEF2BQ02080 365 aaPredicted RBP19.09■□□□□ 0.65
SSU72-201ENST00000291386 PLECQ15149 4684 aaKnown RBP19.09■□□□□ 0.65
SSU72-201ENST00000291386 TRGV11A0A075B6L2 103 aa19.08■□□□□ 0.64
SSU72-201ENST00000291386 DEFB131BA0A096LNP1 70 aa19.08■□□□□ 0.64
SSU72-201ENST00000291386 KCNS1Q96KK3 526 aa19.08■□□□□ 0.64
SSU72-201ENST00000291386 DEFB130BP0DP73 79 aa19.07■□□□□ 0.64
SSU72-201ENST00000291386 DEFB130AP0DP74 79 aa19.07■□□□□ 0.64
SSU72-201ENST00000291386 VAX2Q9UIW0 290 aa19.07■□□□□ 0.64
SSU72-201ENST00000291386 PDE6DO43924 150 aa19.06■□□□□ 0.64
SSU72-201ENST00000291386 TCTAP57738 103 aa19.06■□□□□ 0.64
SSU72-201ENST00000291386 ZNF415Q09FC8 603 aa19.06■□□□□ 0.64
SSU72-201ENST00000291386 TEX261Q6UWH6 196 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms