RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 CSN1S1P47710 185 aa8.76□□□□□ -1.01
CD44-203ENST00000278386 ZNF138P52744 262 aa8.76□□□□□ -1.01
CD44-203ENST00000278386 Q6ZQT7 251 aa8.76□□□□□ -1.01
CD44-203ENST00000278386 Q8N1X5 172 aa8.76□□□□□ -1.01
CD44-203ENST00000278386 C8orf49Q96NF6 230 aa8.76□□□□□ -1.01
CD44-203ENST00000278386 OR5AC2Q9NZP5 309 aa8.76□□□□□ -1.01
CD44-203ENST00000278386 PRO0255Q9UI72 69 aa8.76□□□□□ -1.01
CD44-203ENST00000278386 EREGO14944 169 aa8.75□□□□□ -1.01
CD44-203ENST00000278386 ERVFC1-1P60608 527 aa8.75□□□□□ -1.01
CD44-203ENST00000278386 UBE2L3P68036 154 aaKnown RBP8.75□□□□□ -1.01
CD44-203ENST00000278386 SLAQ13239 276 aa8.75□□□□□ -1.01
CD44-203ENST00000278386 MUC21Q5SSG8 566 aa8.75□□□□□ -1.01
CD44-203ENST00000278386 FXYD5Q96DB9 178 aa8.75□□□□□ -1.01
CD44-203ENST00000278386 WDR61Q9GZS3 305 aaKnown RBP8.75□□□□□ -1.01
CD44-203ENST00000278386 BATF3Q9NR55 127 aa8.75□□□□□ -1.01
CD44-203ENST00000278386 TRGV4A0A0C4DH28 118 aa8.74□□□□□ -1.01
CD44-203ENST00000278386 CRYBA4P53673 196 aa8.74□□□□□ -1.01
CD44-203ENST00000278386 MRPL23Q16540 153 aaKnown RBP8.74□□□□□ -1.01
CD44-203ENST00000278386 Q6ZRN7 208 aaPredicted RBP8.74□□□□□ -1.01
CD44-203ENST00000278386 PCNPQ8WW12 178 aaKnown RBP8.74□□□□□ -1.01
CD44-203ENST00000278386 NMES1Q9C002 83 aa8.74□□□□□ -1.01
CD44-203ENST00000278386 HHLA3Q9XRX5 114 aa8.74□□□□□ -1.01
CD44-203ENST00000278386 SFTA3P0C7M3 94 aa8.73□□□□□ -1.01
CD44-203ENST00000278386 RANP62826 216 aaKnown RBP8.73□□□□□ -1.01
CD44-203ENST00000278386 KHDC3LQ587J8 217 aa8.73□□□□□ -1.01
CD44-203ENST00000278386 FFAR4Q5NUL3 377 aa8.73□□□□□ -1.01
CD44-203ENST00000278386 ATP5SQ99766 215 aa8.73□□□□□ -1.01
CD44-203ENST00000278386 NAGKQ9UJ70 344 aa8.73□□□□□ -1.01
CD44-203ENST00000278386 RPH3ALQ9UNE2 315 aa8.73□□□□□ -1.01
CD44-203ENST00000278386 TRGV11A0A075B6L2 103 aa8.72□□□□□ -1.01
CD44-203ENST00000278386 TRBV7-9A0A0J9YWB2 115 aa8.72□□□□□ -1.01
CD44-203ENST00000278386 RBAKDNA6NC62 111 aa8.72□□□□□ -1.01
CD44-203ENST00000278386 H0YIZ8 118 aa8.72□□□□□ -1.01
CD44-203ENST00000278386 PRAF2O60831 178 aa8.72□□□□□ -1.01
CD44-203ENST00000278386 SRIP30626 198 aa8.72□□□□□ -1.01
CD44-203ENST00000278386 FUSP35637 526 aaKnown RBP eCLIP8.72□□□□□ -1.01
CD44-203ENST00000278386 CYCSP99999 105 aaKnown RBP8.72□□□□□ -1.01
CD44-203ENST00000278386 FHL2Q14192 279 aa8.72□□□□□ -1.01
CD44-203ENST00000278386 ZNF266Q14584 549 aa8.72□□□□□ -1.01
CD44-203ENST00000278386 TMEM183BQ1AE95 376 aa8.72□□□□□ -1.01
CD44-203ENST00000278386 LYPD5Q6UWN5 251 aa8.72□□□□□ -1.01
CD44-203ENST00000278386 FAM159AQ6UWV7 190 aa8.72□□□□□ -1.01
CD44-203ENST00000278386 NEGR1Q7Z3B1 354 aa8.72□□□□□ -1.01
CD44-203ENST00000278386 TMEM183AQ8IXX5 376 aa8.72□□□□□ -1.01
CD44-203ENST00000278386 HYLS1Q96M11 299 aa8.72□□□□□ -1.01
CD44-203ENST00000278386 LY96Q9Y6Y9 160 aa8.72□□□□□ -1.01
CD44-203ENST00000278386 TAS2R45P59539 299 aa8.71□□□□□ -1.02
CD44-203ENST00000278386 NFE4Q86UQ8 179 aa8.71□□□□□ -1.02
CD44-203ENST00000278386 LYPD1Q8N2G4 141 aa8.71□□□□□ -1.02
CD44-203ENST00000278386 ZNF479Q96JC4 524 aa8.71□□□□□ -1.02
CD44-203ENST00000278386 SMIM3Q9BZL3 60 aa8.71□□□□□ -1.02
CD44-203ENST00000278386 MDFICQ9P1T7 246 aa8.71□□□□□ -1.02
CD44-203ENST00000278386 TNFRSF18Q9Y5U5 241 aa8.71□□□□□ -1.02
CD44-203ENST00000278386 TRAV9-2A0A087WT02 112 aa8.7□□□□□ -1.02
CD44-203ENST00000278386 DIRC3C9JPN6 131 aa8.7□□□□□ -1.02
CD44-203ENST00000278386 INMT-MINDY4F8WBC2 141 aa8.7□□□□□ -1.02
CD44-203ENST00000278386 K7EQD1 137 aa8.7□□□□□ -1.02
CD44-203ENST00000278386 IFNA5P01569 189 aa8.7□□□□□ -1.02
CD44-203ENST00000278386 DNAH10OSP0CZ25 163 aa8.7□□□□□ -1.02
CD44-203ENST00000278386 PET100P0DJ07 73 aa8.7□□□□□ -1.02
CD44-203ENST00000278386 GYPEP15421 78 aa8.7□□□□□ -1.02
CD44-203ENST00000278386 Q6AWC8 147 aa8.7□□□□□ -1.02
CD44-203ENST00000278386 OR10G4Q8NGN3 311 aa8.7□□□□□ -1.02
CD44-203ENST00000278386 CMTM2Q8TAZ6 248 aa8.7□□□□□ -1.02
CD44-203ENST00000278386 SCGB1C1Q8TD33 95 aa8.7□□□□□ -1.02
CD44-203ENST00000278386 PPP1R1CQ8WVI7 109 aa8.7□□□□□ -1.02
CD44-203ENST00000278386 MARVELD1Q9BSK0 173 aa8.7□□□□□ -1.02
CD44-203ENST00000278386 HSPB11Q9Y547 144 aa8.7□□□□□ -1.02
CD44-203ENST00000278386 LENEPQ9Y5L5 61 aa8.7□□□□□ -1.02
CD44-203ENST00000278386 SSNA1O43805 119 aa8.69□□□□□ -1.02
CD44-203ENST00000278386 EIF3GO75821 320 aaKnown RBP eCLIP8.69□□□□□ -1.02
CD44-203ENST00000278386 ORM1P02763 201 aa8.69□□□□□ -1.02
CD44-203ENST00000278386 CDPF1Q6NVV7 123 aa8.69□□□□□ -1.02
CD44-203ENST00000278386 WFDC10BQ8IUB3 73 aa8.69□□□□□ -1.02
CD44-203ENST00000278386 TXNDC17Q9BRA2 123 aa8.69□□□□□ -1.02
CD44-203ENST00000278386 SPXQ9BT56 116 aa8.69□□□□□ -1.02
CD44-203ENST00000278386 TRAV4A0A0B4J268 109 aa8.68□□□□□ -1.02
CD44-203ENST00000278386 EPM2AB3EWF7 344 aa8.68□□□□□ -1.02
CD44-203ENST00000278386 C9JCJ5 164 aa8.68□□□□□ -1.02
CD44-203ENST00000278386 F6UZH7 168 aa8.68□□□□□ -1.02
CD44-203ENST00000278386 EVI2AP22794 236 aa8.68□□□□□ -1.02
CD44-203ENST00000278386 H2BFSP57053 126 aa8.68□□□□□ -1.02
CD44-203ENST00000278386 FAM74A1Q5RGS3 127 aa8.68□□□□□ -1.02
CD44-203ENST00000278386 OTORQ9NRC9 128 aa8.68□□□□□ -1.02
CD44-203ENST00000278386 PGPEP1Q9NXJ5 209 aa8.68□□□□□ -1.02
CD44-203ENST00000278386 MSRB1Q9NZV6 116 aa8.68□□□□□ -1.02
CD44-203ENST00000278386 PGPA6NDG6 321 aa8.67□□□□□ -1.02
CD44-203ENST00000278386 MPC2O95563 127 aa8.67□□□□□ -1.02
CD44-203ENST00000278386 RPL12P30050 165 aaKnown RBP8.67□□□□□ -1.02
CD44-203ENST00000278386 GOLT1AQ6ZVE7 132 aa8.67□□□□□ -1.02
CD44-203ENST00000278386 IQCF2Q8IXL9 164 aa8.67□□□□□ -1.02
CD44-203ENST00000278386 NHLRC2Q8NBF2 726 aa8.67□□□□□ -1.02
CD44-203ENST00000278386 OR4C5Q8NGB2 326 aa8.67□□□□□ -1.02
CD44-203ENST00000278386 TMED6Q8WW62 240 aa8.67□□□□□ -1.02
CD44-203ENST00000278386 RASL10AQ92737 203 aa8.67□□□□□ -1.02
CD44-203ENST00000278386 A0A087WTM6 91 aa8.66□□□□□ -1.02
CD44-203ENST00000278386 TRAV21A0A0B4J279 112 aa8.66□□□□□ -1.02
CD44-203ENST00000278386 A0A1W2PPV4 95 aa8.66□□□□□ -1.02
CD44-203ENST00000278386 PPT1P50897 306 aa8.66□□□□□ -1.02
CD44-203ENST00000278386 ACOT6Q3I5F7 207 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms