RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 CT45A10P0DMU9 189 aa14.77□□□□□ -0.04
COL4A3BP-201ENST00000261415 C9orf139Q6ZV77 190 aa14.77□□□□□ -0.04
COL4A3BP-201ENST00000261415 GFRA4Q9GZZ7 299 aa14.77□□□□□ -0.04
COL4A3BP-201ENST00000261415 PRCDQ00LT1 54 aa14.77□□□□□ -0.05
COL4A3BP-201ENST00000261415 ARPC1AQ92747 370 aa14.77□□□□□ -0.05
COL4A3BP-201ENST00000261415 NCBP2LA6PVI3 153 aaKnown RBP14.76□□□□□ -0.05
COL4A3BP-201ENST00000261415 NCR2O95944 276 aa14.76□□□□□ -0.05
COL4A3BP-201ENST00000261415 C8orf88P0DMB2 117 aa14.76□□□□□ -0.05
COL4A3BP-201ENST00000261415 DEFB112Q30KQ8 113 aa14.76□□□□□ -0.05
COL4A3BP-201ENST00000261415 C10orf55Q5SWW7 151 aa14.76□□□□□ -0.05
COL4A3BP-201ENST00000261415 PHLDA1Q8WV24 401 aaPredicted RBP14.76□□□□□ -0.05
COL4A3BP-201ENST00000261415 ANAPC13Q9BS18 74 aa14.76□□□□□ -0.05
COL4A3BP-201ENST00000261415 HINT2Q9BX68 163 aa14.76□□□□□ -0.05
COL4A3BP-201ENST00000261415 RPP21Q9H633 154 aaKnown RBP14.76□□□□□ -0.05
COL4A3BP-201ENST00000261415 E7EUB6 86 aa14.76□□□□□ -0.05
COL4A3BP-201ENST00000261415 GCSHP23434 173 aa14.76□□□□□ -0.05
COL4A3BP-201ENST00000261415 OR1L8Q8NGR8 309 aa14.76□□□□□ -0.05
COL4A3BP-201ENST00000261415 TIMM8BQ9Y5J9 83 aaPredicted RBP14.76□□□□□ -0.05
COL4A3BP-201ENST00000261415 H3BUX3 64 aa14.75□□□□□ -0.05
COL4A3BP-201ENST00000261415 ZNF138P52744 262 aa14.75□□□□□ -0.05
COL4A3BP-201ENST00000261415 IL17RELQ6ZVW7 336 aa14.75□□□□□ -0.05
COL4A3BP-201ENST00000261415 ATP6V0E2Q8NHE4 81 aa14.75□□□□□ -0.05
COL4A3BP-201ENST00000261415 NDUFA4L2Q9NRX3 87 aa14.75□□□□□ -0.05
COL4A3BP-201ENST00000261415 CLEC3BP05452 202 aa14.75□□□□□ -0.05
COL4A3BP-201ENST00000261415 RBPMS2Q6ZRY4 209 aaKnown RBP14.75□□□□□ -0.05
COL4A3BP-201ENST00000261415 TEX29Q8N6K0 151 aa14.75□□□□□ -0.05
COL4A3BP-201ENST00000261415 TMEM116Q8NCL8 245 aa14.75□□□□□ -0.05
COL4A3BP-201ENST00000261415 LINC00479Q96M42 142 aa14.75□□□□□ -0.05
COL4A3BP-201ENST00000261415 YAE1D1Q9NRH1 226 aa14.75□□□□□ -0.05
COL4A3BP-201ENST00000261415 SETXQ7Z333 2677 aaKnown RBP14.74□□□□□ -0.05
COL4A3BP-201ENST00000261415 CGB1A6NKQ9 187 aa14.74□□□□□ -0.05
COL4A3BP-201ENST00000261415 PEX7O00628 323 aa14.74□□□□□ -0.05
COL4A3BP-201ENST00000261415 APOHP02749 345 aaPredicted RBP14.74□□□□□ -0.05
COL4A3BP-201ENST00000261415 TMEM219Q86XT9 240 aa14.74□□□□□ -0.05
COL4A3BP-201ENST00000261415 Q8N9W7 124 aa14.74□□□□□ -0.05
COL4A3BP-201ENST00000261415 MRPL32Q9BYC8 188 aaKnown RBP14.74□□□□□ -0.05
COL4A3BP-201ENST00000261415 CDIP1Q9H305 208 aa14.73□□□□□ -0.05
COL4A3BP-201ENST00000261415 ENY2Q9NPA8 101 aa14.73□□□□□ -0.05
COL4A3BP-201ENST00000261415 FXYD2P54710 66 aa14.73□□□□□ -0.05
COL4A3BP-201ENST00000261415 SLC25A33Q9BSK2 321 aa14.73□□□□□ -0.05
COL4A3BP-201ENST00000261415 VCX2Q9H322 139 aa14.73□□□□□ -0.05
COL4A3BP-201ENST00000261415 H3BMG7 143 aa14.72□□□□□ -0.05
COL4A3BP-201ENST00000261415 APOMO95445 188 aa14.72□□□□□ -0.05
COL4A3BP-201ENST00000261415 RPL27AP46776 148 aaKnown RBP14.72□□□□□ -0.05
COL4A3BP-201ENST00000261415 FOXI1Q12951 378 aa14.72□□□□□ -0.05
COL4A3BP-201ENST00000261415 SYT8Q8NBV8 401 aa14.72□□□□□ -0.05
COL4A3BP-201ENST00000261415 RAX2Q96IS3 184 aa14.72□□□□□ -0.05
COL4A3BP-201ENST00000261415 C20orf78Q9BR46 151 aa14.72□□□□□ -0.05
COL4A3BP-201ENST00000261415 PRSS22Q9GZN4 317 aa14.72□□□□□ -0.05
COL4A3BP-201ENST00000261415 IGLL5B9A064 214 aa14.72□□□□□ -0.05
COL4A3BP-201ENST00000261415 NMUP48645 174 aa14.72□□□□□ -0.05
COL4A3BP-201ENST00000261415 LY6EQ16553 131 aa14.72□□□□□ -0.05
COL4A3BP-201ENST00000261415 ASPHD1Q5U4P2 390 aa14.72□□□□□ -0.05
COL4A3BP-201ENST00000261415 PGLYRP4Q96LB8 373 aa14.72□□□□□ -0.05
COL4A3BP-201ENST00000261415 SMR3AQ99954 134 aa14.72□□□□□ -0.05
COL4A3BP-201ENST00000261415 TM2D2Q9BX73 214 aa14.72□□□□□ -0.05
COL4A3BP-201ENST00000261415 ANK3Q12955 4377 aaKnown RBP14.71□□□□□ -0.05
COL4A3BP-201ENST00000261415 HAX1O00165 279 aa14.71□□□□□ -0.05
COL4A3BP-201ENST00000261415 CSN3P07498 182 aa14.71□□□□□ -0.05
COL4A3BP-201ENST00000261415 UBE2L3P68036 154 aaKnown RBP14.71□□□□□ -0.05
COL4A3BP-201ENST00000261415 Q6ZUT4 128 aa14.71□□□□□ -0.05
COL4A3BP-201ENST00000261415 PRSS3P2Q8NHM4 247 aa14.71□□□□□ -0.05
COL4A3BP-201ENST00000261415 SRSF12Q8WXF0 261 aaKnown RBP14.71□□□□□ -0.05
COL4A3BP-201ENST00000261415 MOB4Q9Y3A3 225 aa14.71□□□□□ -0.05
COL4A3BP-201ENST00000261415 A6NDX4 124 aa14.71□□□□□ -0.06
COL4A3BP-201ENST00000261415 OR8A1Q8NGG7 326 aa14.71□□□□□ -0.06
COL4A3BP-201ENST00000261415 C18orf15Q96N68 181 aa14.71□□□□□ -0.06
COL4A3BP-201ENST00000261415 PRO0461Q9UI25 63 aa14.71□□□□□ -0.06
COL4A3BP-201ENST00000261415 TCRBV4S1A1TA0A5B7 111 aa14.7□□□□□ -0.06
COL4A3BP-201ENST00000261415 CNIH1O95406 144 aa14.7□□□□□ -0.06
COL4A3BP-201ENST00000261415 P01737 135 aa14.7□□□□□ -0.06
COL4A3BP-201ENST00000261415 IGHV4-59P01825 116 aa14.7□□□□□ -0.06
COL4A3BP-201ENST00000261415 PCP2Q8IVA1 136 aa14.7□□□□□ -0.06
COL4A3BP-201ENST00000261415 C5orf56Q8N8D9 126 aa14.7□□□□□ -0.06
COL4A3BP-201ENST00000261415 CACNG8Q8WXS5 425 aa14.7□□□□□ -0.06
COL4A3BP-201ENST00000261415 RASL11BQ9BPW5 248 aa14.7□□□□□ -0.06
COL4A3BP-201ENST00000261415 A0A1B0GWB2 263 aa14.69□□□□□ -0.06
COL4A3BP-201ENST00000261415 INS-IGF2F8WCM5 200 aa14.69□□□□□ -0.06
COL4A3BP-201ENST00000261415 MT-ATP8P03928 68 aa14.69□□□□□ -0.06
COL4A3BP-201ENST00000261415 INSL3P51460 131 aa14.69□□□□□ -0.06
COL4A3BP-201ENST00000261415 WT1-ASQ06250 92 aa14.69□□□□□ -0.06
COL4A3BP-201ENST00000261415 ZNF329Q86UD4 541 aa14.69□□□□□ -0.06
COL4A3BP-201ENST00000261415 C1QTNF4Q9BXJ3 329 aa14.69□□□□□ -0.06
COL4A3BP-201ENST00000261415 ZNF492Q9P255 531 aa14.69□□□□□ -0.06
COL4A3BP-201ENST00000261415 TNFRSF18Q9Y5U5 241 aa14.69□□□□□ -0.06
COL4A3BP-201ENST00000261415 F11RQ9Y624 299 aaKnown RBP14.69□□□□□ -0.06
COL4A3BP-201ENST00000261415 B5MCH6 92 aa14.69□□□□□ -0.06
COL4A3BP-201ENST00000261415 ZNF562Q6V9R5 426 aa14.69□□□□□ -0.06
COL4A3BP-201ENST00000261415 Q6YL49 198 aa14.69□□□□□ -0.06
COL4A3BP-201ENST00000261415 NHP2Q9NX24 153 aaKnown RBP14.69□□□□□ -0.06
COL4A3BP-201ENST00000261415 HIVEP1P15822 2718 aa14.68□□□□□ -0.06
COL4A3BP-201ENST00000261415 TEX22C9J3V5 150 aa14.68□□□□□ -0.06
COL4A3BP-201ENST00000261415 TM4SF20Q53R12 229 aa14.68□□□□□ -0.06
COL4A3BP-201ENST00000261415 NPIPB6E9PJ23 425 aa14.68□□□□□ -0.06
COL4A3BP-201ENST00000261415 APELAP0DMC3 54 aa14.68□□□□□ -0.06
COL4A3BP-201ENST00000261415 RPL32P62910 135 aaKnown RBP14.68□□□□□ -0.06
COL4A3BP-201ENST00000261415 CACNG7P62955 275 aa14.68□□□□□ -0.06
COL4A3BP-201ENST00000261415 ERHP84090 104 aaKnown RBP14.68□□□□□ -0.06
COL4A3BP-201ENST00000261415 NDPQ00604 133 aa14.68□□□□□ -0.06
COL4A3BP-201ENST00000261415 CEND1Q8N111 149 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 106.2 ms