RNA–Protein interactions for RNA: ENST00000253794.6

VPS25-201, Transcript of vacuolar protein sorting 25 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS25, Length 1,101 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-201ENST00000253794 ZFP30Q9Y2G7 519 aa10.24□□□□□ -0.77
VPS25-201ENST00000253794 STAB2Q8WWQ8 2551 aa10.24□□□□□ -0.77
VPS25-201ENST00000253794 TRAV12-2A0A075B6T6 113 aa10.23□□□□□ -0.77
VPS25-201ENST00000253794 TRAV34A0A0B4J273 112 aa10.23□□□□□ -0.77
VPS25-201ENST00000253794 C7orf71A4D174 169 aa10.23□□□□□ -0.77
VPS25-201ENST00000253794 ZNF324O75467 553 aaPredicted RBP10.23□□□□□ -0.77
VPS25-201ENST00000253794 GPX1P07203 203 aa10.23□□□□□ -0.77
VPS25-201ENST00000253794 TAS2R60P59551 318 aa10.23□□□□□ -0.77
VPS25-201ENST00000253794 UBE2G1P62253 170 aa10.23□□□□□ -0.77
VPS25-201ENST00000253794 TOR2AQ5JU69 321 aa10.23□□□□□ -0.77
VPS25-201ENST00000253794 PRR9Q5T870 116 aa10.23□□□□□ -0.77
VPS25-201ENST00000253794 LINC00467Q9BRT7 94 aa10.23□□□□□ -0.77
VPS25-201ENST00000253794 TREM1Q9NP99 234 aa10.23□□□□□ -0.77
VPS25-201ENST00000253794 GOLT1BQ9Y3E0 138 aa10.23□□□□□ -0.77
VPS25-201ENST00000253794 X6R8D5 127 aa10.23□□□□□ -0.77
VPS25-201ENST00000253794 RPL35P42766 123 aaKnown RBP10.22□□□□□ -0.77
VPS25-201ENST00000253794 PRNTQ86SH4 94 aa10.22□□□□□ -0.77
VPS25-201ENST00000253794 SMIM12Q96EX1 92 aa10.22□□□□□ -0.77
VPS25-201ENST00000253794 SGK494Q96LW2 274 aa10.22□□□□□ -0.77
VPS25-201ENST00000253794 EIF5A2Q9GZV4 153 aaKnown RBP10.22□□□□□ -0.77
VPS25-201ENST00000253794 RETNQ9HD89 108 aa10.22□□□□□ -0.77
VPS25-201ENST00000253794 SMIM9A6NGZ8 99 aa10.21□□□□□ -0.77
VPS25-201ENST00000253794 H7BYZ3 331 aa10.21□□□□□ -0.77
VPS25-201ENST00000253794 BTN1A1Q13410 526 aa10.21□□□□□ -0.77
VPS25-201ENST00000253794 OR11H2Q8NH07 326 aa10.21□□□□□ -0.77
VPS25-201ENST00000253794 MLST8Q9BVC4 326 aa10.21□□□□□ -0.77
VPS25-201ENST00000253794 MED9Q9NWA0 146 aa10.21□□□□□ -0.77
VPS25-201ENST00000253794 RAB19A4D1S5 217 aa10.2□□□□□ -0.78
VPS25-201ENST00000253794 TGP01266 2768 aa10.2□□□□□ -0.78
VPS25-201ENST00000253794 SRP19P09132 144 aaKnown RBP10.2□□□□□ -0.78
VPS25-201ENST00000253794 MIFP14174 115 aa10.2□□□□□ -0.78
VPS25-201ENST00000253794 RNASE4P34096 147 aaKnown RBP10.2□□□□□ -0.78
VPS25-201ENST00000253794 SMUG1Q53HV7 270 aa10.2□□□□□ -0.78
VPS25-201ENST00000253794 TMEM183AQ8IXX5 376 aa10.2□□□□□ -0.78
VPS25-201ENST00000253794 Q8NAQ8 132 aa10.2□□□□□ -0.78
VPS25-201ENST00000253794 C8orf49Q96NF6 230 aa10.2□□□□□ -0.78
VPS25-201ENST00000253794 PYGO2Q9BRQ0 406 aa10.2□□□□□ -0.78
VPS25-201ENST00000253794 NIPSNAP3BQ9BS92 247 aa10.2□□□□□ -0.78
VPS25-201ENST00000253794 DERL1Q9BUN8 251 aa10.2□□□□□ -0.78
VPS25-201ENST00000253794 TRAV12-3A0A0B4J271 114 aa10.19□□□□□ -0.78
VPS25-201ENST00000253794 TRAV21A0A0B4J279 112 aa10.19□□□□□ -0.78
VPS25-201ENST00000253794 C9JCJ5 164 aa10.19□□□□□ -0.78
VPS25-201ENST00000253794 TDRG1Q3Y452 100 aa10.19□□□□□ -0.78
VPS25-201ENST00000253794 C11orf68Q9H3H3 251 aaKnown RBP10.19□□□□□ -0.78
VPS25-201ENST00000253794 TRBV20OR9-2A0A075B6H5 130 aa10.18□□□□□ -0.78
VPS25-201ENST00000253794 J3KRW8 73 aa10.18□□□□□ -0.78
VPS25-201ENST00000253794 GCGP01275 180 aa10.18□□□□□ -0.78
VPS25-201ENST00000253794 PFN1P07737 140 aaKnown RBP10.18□□□□□ -0.78
VPS25-201ENST00000253794 ZNF80P51504 273 aaPredicted RBP10.18□□□□□ -0.78
VPS25-201ENST00000253794 PEA15Q15121 130 aa10.18□□□□□ -0.78
VPS25-201ENST00000253794 BAGE2Q86Y30 109 aa10.18□□□□□ -0.78
VPS25-201ENST00000253794 ZC2HC1AQ96GY0 325 aa10.18□□□□□ -0.78
VPS25-201ENST00000253794 TMEM208Q9BTX3 173 aa10.18□□□□□ -0.78
VPS25-201ENST00000253794 PARLQ9H300 379 aa10.18□□□□□ -0.78
VPS25-201ENST00000253794 U3KQK5 164 aa10.18□□□□□ -0.78
VPS25-201ENST00000253794 IGLV2-8P01709 118 aa10.17□□□□□ -0.78
VPS25-201ENST00000253794 SRSF3P84103 164 aaKnown RBP10.17□□□□□ -0.78
VPS25-201ENST00000253794 ZNF674Q2M3X9 581 aa10.17□□□□□ -0.78
VPS25-201ENST00000253794 ANXA2RQ3ZCQ2 193 aa10.17□□□□□ -0.78
VPS25-201ENST00000253794 CENPWQ5EE01 88 aa10.17□□□□□ -0.78
VPS25-201ENST00000253794 LINC01587Q99440 93 aa10.17□□□□□ -0.78
VPS25-201ENST00000253794 IGHV1OR15-1A0A075B7D0 117 aa10.16□□□□□ -0.78
VPS25-201ENST00000253794 IGHV4-28A0A0C4DH34 117 aa10.16□□□□□ -0.78
VPS25-201ENST00000253794 C9JQL5 133 aa10.16□□□□□ -0.78
VPS25-201ENST00000253794 GNG4P50150 75 aa10.16□□□□□ -0.78
VPS25-201ENST00000253794 CRIP1P50238 77 aa10.16□□□□□ -0.78
VPS25-201ENST00000253794 RRN3P1Q2M238 152 aa10.16□□□□□ -0.78
VPS25-201ENST00000253794 Q6ZQT7 251 aa10.16□□□□□ -0.78
VPS25-201ENST00000253794 ZNF493Q6ZR52 646 aa10.16□□□□□ -0.78
VPS25-201ENST00000253794 EIF4E3Q8N5X7 224 aaKnown RBP10.16□□□□□ -0.78
VPS25-201ENST00000253794 RNASE8Q8TDE3 154 aaKnown RBP10.16□□□□□ -0.78
VPS25-201ENST00000253794 DNAH7Q8WXX0 4024 aa10.15□□□□□ -0.78
VPS25-201ENST00000253794 IGHV3OR16-12A0A075B7B8 117 aa10.15□□□□□ -0.78
VPS25-201ENST00000253794 PLAC8L1A1L4L8 177 aa10.15□□□□□ -0.78
VPS25-201ENST00000253794 TMEM189A5PLL7 270 aa10.15□□□□□ -0.78
VPS25-201ENST00000253794 LINC00862A6NCI5 91 aa10.15□□□□□ -0.78
VPS25-201ENST00000253794 FABP5P3A8MUU1 101 aa10.15□□□□□ -0.78
VPS25-201ENST00000253794 FAM74A3Q4VXF1 159 aa10.15□□□□□ -0.78
VPS25-201ENST00000253794 FAM162BQ5T6X4 162 aa10.15□□□□□ -0.78
VPS25-201ENST00000253794 TMEM263Q8WUH6 116 aaKnown RBP10.15□□□□□ -0.78
VPS25-201ENST00000253794 EDA2RQ9HAV5 297 aa10.15□□□□□ -0.78
VPS25-201ENST00000253794 TP53TG3Q9ULZ0 132 aa10.15□□□□□ -0.78
VPS25-201ENST00000253794 LY96Q9Y6Y9 160 aa10.15□□□□□ -0.78
VPS25-201ENST00000253794 ZNF705GA8MUZ8 300 aaPredicted RBP10.14□□□□□ -0.79
VPS25-201ENST00000253794 IBA57Q5T440 356 aaKnown RBP10.14□□□□□ -0.79
VPS25-201ENST00000253794 UQCC3Q6UW78 93 aa10.14□□□□□ -0.79
VPS25-201ENST00000253794 C16orf74Q96GX8 76 aa10.14□□□□□ -0.79
VPS25-201ENST00000253794 KCNS1Q96KK3 526 aa10.14□□□□□ -0.79
VPS25-201ENST00000253794 C11orf21Q9P2W6 132 aa10.14□□□□□ -0.79
VPS25-201ENST00000253794 SH2D1AO60880 128 aa10.13□□□□□ -0.79
VPS25-201ENST00000253794 AZU1P20160 251 aa10.13□□□□□ -0.79
VPS25-201ENST00000253794 FAM159AQ6UWV7 190 aa10.13□□□□□ -0.79
VPS25-201ENST00000253794 NHLRC2Q8NBF2 726 aa10.13□□□□□ -0.79
VPS25-201ENST00000253794 C11orf72Q8NBR9 251 aa10.13□□□□□ -0.79
VPS25-201ENST00000253794 IL17DQ8TAD2 202 aa10.13□□□□□ -0.79
VPS25-201ENST00000253794 SMIM7Q9BQ49 75 aa10.13□□□□□ -0.79
VPS25-201ENST00000253794 BIN3Q9NQY0 253 aa10.13□□□□□ -0.79
VPS25-201ENST00000253794 LINC01559Q495D7 138 aa10.12□□□□□ -0.79
VPS25-201ENST00000253794 DNLZQ5SXM8 178 aa10.12□□□□□ -0.79
VPS25-201ENST00000253794 TRGV11A0A075B6L2 103 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms