RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 MRPL27Q9P0M9 148 aaKnown RBP6.01□□□□□ -1.45
RIF1-201ENST00000243326 E9PQ18 207 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 OVOL3O00110 214 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 THBDP07204 575 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 TRGV9Q99603 122 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 DPH3P1Q9H4G8 78 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 TMEM178BH3BS89 294 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 GAGE12JA6NER3 117 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 GAGE4Q13068 117 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 GAGE5Q13069 117 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 NTN5Q8WTR8 489 aaPredicted RBP6.01□□□□□ -1.45
RIF1-201ENST00000243326 IGKV3D-7A0A0C4DH55 119 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 TRAV25A0A0B4J276 109 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 OVOL1O14753 267 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 DEFB130BP0DP73 79 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 DEFB130AP0DP74 79 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 GAGE6Q13070 117 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 RASL10AQ92737 203 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 IFITM1P13164 125 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 SPACA3Q8IXA5 215 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 KLHL30-AS1Q8NEE0 82 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 TMEM126AQ9H061 195 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 NLRC5Q86WI3 1866 aa6.01□□□□□ -1.45
RIF1-201ENST00000243326 A0A0G2JNJ9 132 aa6□□□□□ -1.45
RIF1-201ENST00000243326 C2orf66Q6UXQ4 117 aa6□□□□□ -1.45
RIF1-201ENST00000243326 Q9UFV3 132 aa6□□□□□ -1.45
RIF1-201ENST00000243326 FOXE3Q13461 319 aa6□□□□□ -1.45
RIF1-201ENST00000243326 PTH2Q96A98 100 aa6□□□□□ -1.45
RIF1-201ENST00000243326 CARD19Q96LW7 228 aa6□□□□□ -1.45
RIF1-201ENST00000243326 C12orf74Q32Q52 190 aa6□□□□□ -1.45
RIF1-201ENST00000243326 SHANK2-AS3Q9BTD1 123 aa6□□□□□ -1.45
RIF1-201ENST00000243326 FAM57AQ8TBR7 257 aa6□□□□□ -1.45
RIF1-201ENST00000243326 SLC50A1Q9BRV3 221 aa6□□□□□ -1.45
RIF1-201ENST00000243326 LEPROTO15243 131 aa6□□□□□ -1.45
RIF1-201ENST00000243326 SLC25A20O43772 301 aa6□□□□□ -1.45
RIF1-201ENST00000243326 RNASE6Q93091 150 aaKnown RBP6□□□□□ -1.45
RIF1-201ENST00000243326 TAX1BP3O14907 124 aa6□□□□□ -1.45
RIF1-201ENST00000243326 PLEKHB2Q96CS7 222 aa6□□□□□ -1.45
RIF1-201ENST00000243326 WT1-ASQ06250 92 aa6□□□□□ -1.45
RIF1-201ENST00000243326 H3BUX3 64 aa6□□□□□ -1.45
RIF1-201ENST00000243326 HOXB4P17483 251 aaPredicted RBP6□□□□□ -1.45
RIF1-201ENST00000243326 MSRB1Q9NZV6 116 aa6□□□□□ -1.45
RIF1-201ENST00000243326 C6orf226Q5I0X4 101 aa5.99□□□□□ -1.45
RIF1-201ENST00000243326 Q71RC1 249 aaPredicted RBP5.99□□□□□ -1.45
RIF1-201ENST00000243326 FGF23Q9GZV9 251 aaPredicted RBP5.99□□□□□ -1.45
RIF1-201ENST00000243326 IGLV3-12A0A075B6K2 115 aa5.99□□□□□ -1.45
RIF1-201ENST00000243326 PPBPP02775 128 aa5.99□□□□□ -1.45
RIF1-201ENST00000243326 PMVKQ15126 192 aa5.99□□□□□ -1.45
RIF1-201ENST00000243326 PPDPFLQ8WWR9 84 aa5.99□□□□□ -1.45
RIF1-201ENST00000243326 C17orf58Q2M2W7 97 aa5.99□□□□□ -1.45
RIF1-201ENST00000243326 C1QTNF4Q9BXJ3 329 aa5.99□□□□□ -1.45
RIF1-201ENST00000243326 PRSS29PA6NIE9 313 aa5.99□□□□□ -1.45
RIF1-201ENST00000243326 VCYO14598 125 aa5.99□□□□□ -1.45
RIF1-201ENST00000243326 CDKN1BP46527 198 aa5.99□□□□□ -1.45
RIF1-201ENST00000243326 ATP5IP56385 69 aaPredicted RBP5.99□□□□□ -1.45
RIF1-201ENST00000243326 DEFB105AQ8NG35 78 aa5.99□□□□□ -1.45
RIF1-201ENST00000243326 FAM104BQ5XKR9 115 aa5.99□□□□□ -1.45
RIF1-201ENST00000243326 DAD1P61803 113 aa5.99□□□□□ -1.45
RIF1-201ENST00000243326 TRPT1Q86TN4 253 aaKnown RBP5.99□□□□□ -1.45
RIF1-201ENST00000243326 RHPN1-AS1Q9BWJ2 59 aa5.99□□□□□ -1.45
RIF1-201ENST00000243326 HIST2H2BDQ6DRA6 164 aa5.99□□□□□ -1.45
RIF1-201ENST00000243326 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.99□□□□□ -1.45
RIF1-201ENST00000243326 FAM90A9PA6NNJ1 464 aa5.99□□□□□ -1.45
RIF1-201ENST00000243326 SMIM27A0A1W2PRY6 76 aa5.99□□□□□ -1.45
RIF1-201ENST00000243326 FXYD5Q96DB9 178 aa5.99□□□□□ -1.45
RIF1-201ENST00000243326 LGALS1P09382 135 aaKnown RBP5.98□□□□□ -1.45
RIF1-201ENST00000243326 C5orf64Q2M2E5 130 aa5.98□□□□□ -1.45
RIF1-201ENST00000243326 EXPH5Q8NEV8 1989 aa5.98□□□□□ -1.45
RIF1-201ENST00000243326 Q8N8P6 123 aa5.98□□□□□ -1.45
RIF1-201ENST00000243326 SAA4P35542 130 aa5.98□□□□□ -1.45
RIF1-201ENST00000243326 CFHR4Q92496 578 aa5.98□□□□□ -1.45
RIF1-201ENST00000243326 PLXNB3Q9ULL4 1909 aa5.98□□□□□ -1.45
RIF1-201ENST00000243326 PIP4P2Q8N4L2 257 aa5.98□□□□□ -1.45
RIF1-201ENST00000243326 M0R1W7 72 aa5.98□□□□□ -1.45
RIF1-201ENST00000243326 FXYD2P54710 66 aa5.98□□□□□ -1.45
RIF1-201ENST00000243326 SMPXQ9UHP9 88 aa5.98□□□□□ -1.45
RIF1-201ENST00000243326 TNRC6BQ9UPQ9 1833 aaKnown RBP5.98□□□□□ -1.45
RIF1-201ENST00000243326 NDUFA4L2Q9NRX3 87 aa5.98□□□□□ -1.45
RIF1-201ENST00000243326 DTX1Q86Y01 620 aa5.98□□□□□ -1.45
RIF1-201ENST00000243326 OR11H6Q8NGC7 330 aa5.98□□□□□ -1.45
RIF1-201ENST00000243326 DENND4CQ5VZ89 1909 aa5.98□□□□□ -1.45
RIF1-201ENST00000243326 DTX2Q86UW9 622 aa5.97□□□□□ -1.45
RIF1-201ENST00000243326 PRSS46E5RG02 174 aa5.97□□□□□ -1.45
RIF1-201ENST00000243326 LTAP01374 205 aa5.97□□□□□ -1.45
RIF1-201ENST00000243326 HAMPP81172 84 aa5.97□□□□□ -1.45
RIF1-201ENST00000243326 ZNF492Q9P255 531 aa5.97□□□□□ -1.45
RIF1-201ENST00000243326 TRACP01848 142 aa5.97□□□□□ -1.45
RIF1-201ENST00000243326 C1orf162Q8NEQ5 155 aaPredicted RBP5.97□□□□□ -1.45
RIF1-201ENST00000243326 DEFB131AP59861 70 aa5.97□□□□□ -1.45
RIF1-201ENST00000243326 YPEL3P61236 119 aaPredicted RBP5.97□□□□□ -1.45
RIF1-201ENST00000243326 TMEM30BQ3MIR4 351 aa5.97□□□□□ -1.45
RIF1-201ENST00000243326 RNF166Q96A37 237 aaPredicted RBP5.97□□□□□ -1.45
RIF1-201ENST00000243326 RASL11AQ6T310 242 aa5.97□□□□□ -1.45
RIF1-201ENST00000243326 TRGV11A0A075B6L2 103 aa5.97□□□□□ -1.45
RIF1-201ENST00000243326 ATP6V0E1O15342 81 aa5.97□□□□□ -1.45
RIF1-201ENST00000243326 TMEM86BQ8N661 226 aa5.97□□□□□ -1.45
RIF1-201ENST00000243326 IGHV4-28A0A0C4DH34 117 aa5.97□□□□□ -1.45
RIF1-201ENST00000243326 CRYBA4P53673 196 aa5.96□□□□□ -1.45
RIF1-201ENST00000243326 ANAPC10Q9UM13 185 aa5.96□□□□□ -1.45
RIF1-201ENST00000243326 TRBV19A0A075B6N1 114 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms