RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 RSPO3Q9BXY4 272 aaPredicted RBP9.16□□□□□ -0.94
LAMA4-201ENST00000230538 MRPL35Q9NZE8 188 aaKnown RBP9.16□□□□□ -0.94
LAMA4-201ENST00000230538 TRAV13-2A0A0B4J235 113 aa9.16□□□□□ -0.94
LAMA4-201ENST00000230538 PPDPFLQ8WWR9 84 aa9.16□□□□□ -0.94
LAMA4-201ENST00000230538 IGLV1-44P01699 117 aa9.16□□□□□ -0.94
LAMA4-201ENST00000230538 SRSF2Q01130 221 aaKnown RBP9.15□□□□□ -0.94
LAMA4-201ENST00000230538 C10orf91Q5T1B1 145 aa9.15□□□□□ -0.94
LAMA4-201ENST00000230538 TAL2Q16559 108 aa9.15□□□□□ -0.94
LAMA4-201ENST00000230538 RNASE13Q5GAN3 156 aaKnown RBP9.15□□□□□ -0.94
LAMA4-201ENST00000230538 F8W1H4 67 aa9.15□□□□□ -0.94
LAMA4-201ENST00000230538 K7EM74 188 aa9.15□□□□□ -0.94
LAMA4-201ENST00000230538 PRO1854Q9UHT4 67 aa9.15□□□□□ -0.94
LAMA4-201ENST00000230538 IGLC1P0CG04 106 aa9.15□□□□□ -0.95
LAMA4-201ENST00000230538 PYGO2Q9BRQ0 406 aa9.15□□□□□ -0.95
LAMA4-201ENST00000230538 KIAA2026Q5HYC2 2103 aa9.15□□□□□ -0.95
LAMA4-201ENST00000230538 WIPF3A6NGB9 483 aa9.14□□□□□ -0.95
LAMA4-201ENST00000230538 IGLC2P0DOY2 106 aa9.14□□□□□ -0.95
LAMA4-201ENST00000230538 IGLC3P0DOY3 106 aa9.14□□□□□ -0.95
LAMA4-201ENST00000230538 MRPL53Q96EL3 112 aaKnown RBP9.14□□□□□ -0.95
LAMA4-201ENST00000230538 PLXND1Q9Y4D7 1925 aa9.14□□□□□ -0.95
LAMA4-201ENST00000230538 F8VRH5 84 aa9.14□□□□□ -0.95
LAMA4-201ENST00000230538 MYO7BQ6PIF6 2116 aa9.14□□□□□ -0.95
LAMA4-201ENST00000230538 ELANEP08246 267 aa9.14□□□□□ -0.95
LAMA4-201ENST00000230538 HOXB4P17483 251 aaPredicted RBP9.14□□□□□ -0.95
LAMA4-201ENST00000230538 C20orf78Q9BR46 151 aa9.14□□□□□ -0.95
LAMA4-201ENST00000230538 TSSC4Q9Y5U2 329 aaPredicted RBP9.14□□□□□ -0.95
LAMA4-201ENST00000230538 ATP6V0BQ99437 205 aa9.14□□□□□ -0.95
LAMA4-201ENST00000230538 K7EP34 96 aa9.14□□□□□ -0.95
LAMA4-201ENST00000230538 CARD19Q96LW7 228 aa9.14□□□□□ -0.95
LAMA4-201ENST00000230538 J3QQQ9 107 aa9.13□□□□□ -0.95
LAMA4-201ENST00000230538 IGLL1P15814 213 aa9.13□□□□□ -0.95
LAMA4-201ENST00000230538 K7EN84 100 aa9.13□□□□□ -0.95
LAMA4-201ENST00000230538 SPANXA1Q9NS26 97 aa9.13□□□□□ -0.95
LAMA4-201ENST00000230538 TRAV12-1A0A0B4J245 112 aa9.13□□□□□ -0.95
LAMA4-201ENST00000230538 H3BUA1 57 aa9.13□□□□□ -0.95
LAMA4-201ENST00000230538 LTAP01374 205 aa9.13□□□□□ -0.95
LAMA4-201ENST00000230538 IGHG4P01861 327 aa9.13□□□□□ -0.95
LAMA4-201ENST00000230538 FOXI2Q6ZQN5 318 aa9.13□□□□□ -0.95
LAMA4-201ENST00000230538 INTS1Q8N201 2190 aaKnown RBP9.13□□□□□ -0.95
LAMA4-201ENST00000230538 MED12Q93074 2177 aa9.13□□□□□ -0.95
LAMA4-201ENST00000230538 BVES-AS1Q5T3Y7 98 aa9.13□□□□□ -0.95
LAMA4-201ENST00000230538 NOP10Q9NPE3 64 aaKnown RBP9.13□□□□□ -0.95
LAMA4-201ENST00000230538 K7ERJ3 54 aa9.12□□□□□ -0.95
LAMA4-201ENST00000230538 ZMAT4Q9H898 229 aa9.12□□□□□ -0.95
LAMA4-201ENST00000230538 J3QKU1 62 aa9.12□□□□□ -0.95
LAMA4-201ENST00000230538 RSPO1Q2MKA7 263 aaPredicted RBP9.12□□□□□ -0.95
LAMA4-201ENST00000230538 NDUFS7O75251 213 aa9.12□□□□□ -0.95
LAMA4-201ENST00000230538 RHOHQ15669 191 aa9.12□□□□□ -0.95
LAMA4-201ENST00000230538 KIAA1671Q9BY89 1806 aa9.12□□□□□ -0.95
LAMA4-201ENST00000230538 A0A1W2PPM0 123 aa9.12□□□□□ -0.95
LAMA4-201ENST00000230538 C22orf46C9J442 243 aa9.12□□□□□ -0.95
LAMA4-201ENST00000230538 C17orf77Q96MU5 243 aa9.12□□□□□ -0.95
LAMA4-201ENST00000230538 FAM215AQ9Y5M1 114 aa9.12□□□□□ -0.95
LAMA4-201ENST00000230538 KMT2EQ8IZD2 1858 aa9.12□□□□□ -0.95
LAMA4-201ENST00000230538 FRMPD3Q5JV73 1810 aa9.12□□□□□ -0.95
LAMA4-201ENST00000230538 GNRH2O43555 120 aa9.12□□□□□ -0.95
LAMA4-201ENST00000230538 LHBP01229 141 aa9.12□□□□□ -0.95
LAMA4-201ENST00000230538 MRAPQ8TCY5 172 aa9.12□□□□□ -0.95
LAMA4-201ENST00000230538 CFHR4Q92496 578 aa9.12□□□□□ -0.95
LAMA4-201ENST00000230538 NPSP0C0P6 89 aa9.11□□□□□ -0.95
LAMA4-201ENST00000230538 ZNF491Q8N8L2 437 aa9.11□□□□□ -0.95
LAMA4-201ENST00000230538 A0A0J9YY99 117 aa9.11□□□□□ -0.95
LAMA4-201ENST00000230538 IGHV2-70P01814 119 aa9.11□□□□□ -0.95
LAMA4-201ENST00000230538 HLA-DMBP28068 263 aa9.11□□□□□ -0.95
LAMA4-201ENST00000230538 XCL1P47992 114 aa9.11□□□□□ -0.95
LAMA4-201ENST00000230538 CACNA1EQ15878 2313 aa9.11□□□□□ -0.95
LAMA4-201ENST00000230538 TINCRA0A1B0GVN0 87 aa9.11□□□□□ -0.95
LAMA4-201ENST00000230538 IFITM1P13164 125 aa9.11□□□□□ -0.95
LAMA4-201ENST00000230538 DYNAPQ8N1N2 210 aa9.11□□□□□ -0.95
LAMA4-201ENST00000230538 ZDBF2Q9HCK1 2354 aa9.11□□□□□ -0.95
LAMA4-201ENST00000230538 C11orf52Q96A22 123 aa9.11□□□□□ -0.95
LAMA4-201ENST00000230538 DKK2Q9UBU2 259 aa9.11□□□□□ -0.95
LAMA4-201ENST00000230538 U3KQE9 123 aa9.11□□□□□ -0.95
LAMA4-201ENST00000230538 IGKV2D-24A0A075B6R9 120 aa9.11□□□□□ -0.95
LAMA4-201ENST00000230538 hADV29S1A0JD25 119 aa9.11□□□□□ -0.95
LAMA4-201ENST00000230538 ETDBQ3ZM63 59 aa9.11□□□□□ -0.95
LAMA4-201ENST00000230538 IGKV1OR2-108A0A075B7D4 117 aa9.1□□□□□ -0.95
LAMA4-201ENST00000230538 F6UB75 175 aa9.1□□□□□ -0.95
LAMA4-201ENST00000230538 KAAG1Q9UBP8 84 aa9.1□□□□□ -0.95
LAMA4-201ENST00000230538 CRYGCP07315 174 aa9.1□□□□□ -0.95
LAMA4-201ENST00000230538 IGHV2-5P01817 119 aa9.1□□□□□ -0.95
LAMA4-201ENST00000230538 K7EP13 123 aa9.1□□□□□ -0.95
LAMA4-201ENST00000230538 FOXE3Q13461 319 aa9.1□□□□□ -0.95
LAMA4-201ENST00000230538 IGFBPL1Q8WX77 278 aa9.1□□□□□ -0.95
LAMA4-201ENST00000230538 DEFB112Q30KQ8 113 aa9.1□□□□□ -0.95
LAMA4-201ENST00000230538 VPREB3Q9UKI3 123 aa9.1□□□□□ -0.95
LAMA4-201ENST00000230538 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.09□□□□□ -0.95
LAMA4-201ENST00000230538 IGKV2-29A2NJV5 120 aaPredicted RBP9.09□□□□□ -0.95
LAMA4-201ENST00000230538 UBE2BP63146 152 aa9.09□□□□□ -0.95
LAMA4-201ENST00000230538 PLA2G2CQ5R387 149 aa9.09□□□□□ -0.95
LAMA4-201ENST00000230538 Q6ZQT7 251 aa9.09□□□□□ -0.95
LAMA4-201ENST00000230538 SPANXDQ9BXN6 97 aa9.09□□□□□ -0.95
LAMA4-201ENST00000230538 TRACP01848 142 aa9.09□□□□□ -0.95
LAMA4-201ENST00000230538 AKAP6Q13023 2319 aa9.09□□□□□ -0.95
LAMA4-201ENST00000230538 SIVA1O15304 175 aa9.09□□□□□ -0.95
LAMA4-201ENST00000230538 IGHV4-59P01825 116 aa9.09□□□□□ -0.95
LAMA4-201ENST00000230538 PRR20EP86478 221 aa9.09□□□□□ -0.95
LAMA4-201ENST00000230538 PRR20CP86479 221 aa9.09□□□□□ -0.95
LAMA4-201ENST00000230538 PRR20DP86480 221 aa9.09□□□□□ -0.95
LAMA4-201ENST00000230538 PRR20BP86481 221 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms