RNA–Protein interactions for RNA: ENST00000216840.10

RABGGTA-201, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-201ENST00000216840 SYNJ2BPP57105 145 aa13.02□□□□□ -0.33
RABGGTA-201ENST00000216840 HIST1H1AQ02539 215 aaPredicted RBP13.02□□□□□ -0.33
RABGGTA-201ENST00000216840 Q6ZSV7 163 aa13.02□□□□□ -0.33
RABGGTA-201ENST00000216840 C18orf65Q6ZTR6 163 aa13.02□□□□□ -0.33
RABGGTA-201ENST00000216840 BORCS7Q96B45 105 aa13.02□□□□□ -0.33
RABGGTA-201ENST00000216840 LINC00477Q96M19 166 aa13.02□□□□□ -0.33
RABGGTA-201ENST00000216840 ESM1Q9NQ30 184 aa13.02□□□□□ -0.33
RABGGTA-201ENST00000216840 IGLC6P0CF74 106 aa13.01□□□□□ -0.33
RABGGTA-201ENST00000216840 DEFB1P60022 68 aa13.01□□□□□ -0.33
RABGGTA-201ENST00000216840 DNLZQ5SXM8 178 aa13.01□□□□□ -0.33
RABGGTA-201ENST00000216840 OR10J6PQ8NGY7 276 aa13.01□□□□□ -0.33
RABGGTA-201ENST00000216840 LENEPQ9Y5L5 61 aa13.01□□□□□ -0.33
RABGGTA-201ENST00000216840 LOC102724200A0A096LPH7 203 aaPredicted RBP13.01□□□□□ -0.33
RABGGTA-201ENST00000216840 CTRLP40313 264 aa13.01□□□□□ -0.33
RABGGTA-201ENST00000216840 FER1L6-AS1Q8NA97 138 aa13.01□□□□□ -0.33
RABGGTA-201ENST00000216840 DCANP1Q8TF63 244 aa13.01□□□□□ -0.33
RABGGTA-201ENST00000216840 KCNS1Q96KK3 526 aa13.01□□□□□ -0.33
RABGGTA-201ENST00000216840 ACANP16112 2415 aa13.01□□□□□ -0.33
RABGGTA-201ENST00000216840 TCTEX1D4Q5JR98 221 aa13□□□□□ -0.33
RABGGTA-201ENST00000216840 C11orf21Q9P2W6 132 aa13□□□□□ -0.33
RABGGTA-201ENST00000216840 MYO9AB2RTY4 2548 aa13□□□□□ -0.33
RABGGTA-201ENST00000216840 OR8A1Q8NGG7 326 aa13□□□□□ -0.33
RABGGTA-201ENST00000216840 IGKV3D-20A0A0C4DH25 116 aa12.99□□□□□ -0.33
RABGGTA-201ENST00000216840 PRR9Q5T870 116 aa12.99□□□□□ -0.33
RABGGTA-201ENST00000216840 SAMD13Q5VXD3 122 aa12.99□□□□□ -0.33
RABGGTA-201ENST00000216840 ZNF493Q6ZR52 646 aa12.99□□□□□ -0.33
RABGGTA-201ENST00000216840 SAMD10Q9BYL1 202 aa12.99□□□□□ -0.33
RABGGTA-201ENST00000216840 GSN-AS1Q9NRJ2 163 aa12.99□□□□□ -0.33
RABGGTA-201ENST00000216840 F6UB75 175 aa12.98□□□□□ -0.33
RABGGTA-201ENST00000216840 GPX1P07203 203 aa12.98□□□□□ -0.33
RABGGTA-201ENST00000216840 ID1P41134 155 aa12.98□□□□□ -0.33
RABGGTA-201ENST00000216840 DEFB136Q30KP8 78 aa12.98□□□□□ -0.33
RABGGTA-201ENST00000216840 MS4A6AQ9H2W1 248 aa12.98□□□□□ -0.33
RABGGTA-201ENST00000216840 MUC21A0A0G2JKD1 596 aa12.98□□□□□ -0.33
RABGGTA-201ENST00000216840 MUC21A0A140T8X8 626 aa12.98□□□□□ -0.33
RABGGTA-201ENST00000216840 MUC21Q5SSG8 566 aa12.98□□□□□ -0.33
RABGGTA-201ENST00000216840 Q6ZQT7 251 aa12.98□□□□□ -0.33
RABGGTA-201ENST00000216840 WFDC3Q8IUB2 231 aa12.98□□□□□ -0.33
RABGGTA-201ENST00000216840 ZFAND2AQ8N6M9 145 aa12.98□□□□□ -0.33
RABGGTA-201ENST00000216840 FAM19A4Q96LR4 140 aa12.98□□□□□ -0.33
RABGGTA-201ENST00000216840 C2orf70A6NJV1 201 aa12.97□□□□□ -0.33
RABGGTA-201ENST00000216840 SSTP61278 116 aa12.97□□□□□ -0.33
RABGGTA-201ENST00000216840 S100A12P80511 92 aa12.97□□□□□ -0.33
RABGGTA-201ENST00000216840 Q6ZWC4 215 aa12.97□□□□□ -0.33
RABGGTA-201ENST00000216840 FASNP49327 2511 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-201ENST00000216840 SLURP1P55000 103 aa12.97□□□□□ -0.33
RABGGTA-201ENST00000216840 C4orf3Q8WVX3 66 aa12.97□□□□□ -0.33
RABGGTA-201ENST00000216840 ANK3Q12955 4377 aaKnown RBP12.96□□□□□ -0.33
RABGGTA-201ENST00000216840 ZNF324O75467 553 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-201ENST00000216840 CNFNQ9BYD5 112 aa12.96□□□□□ -0.33
RABGGTA-201ENST00000216840 LINC01619G3V211 115 aa12.95□□□□□ -0.34
RABGGTA-201ENST00000216840 PMCHP20382 165 aa12.95□□□□□ -0.34
RABGGTA-201ENST00000216840 AMTP48728 403 aa12.95□□□□□ -0.34
RABGGTA-201ENST00000216840 URB1-AS1Q96HZ7 61 aa12.95□□□□□ -0.34
RABGGTA-201ENST00000216840 NTF3P20783 257 aa12.95□□□□□ -0.34
RABGGTA-201ENST00000216840 TFPI2P48307 235 aa12.95□□□□□ -0.34
RABGGTA-201ENST00000216840 TWIST1Q15672 202 aa12.95□□□□□ -0.34
RABGGTA-201ENST00000216840 ADAMTSL5Q6ZMM2 481 aa12.95□□□□□ -0.34
RABGGTA-201ENST00000216840 NIT1Q86X76 327 aa12.95□□□□□ -0.34
RABGGTA-201ENST00000216840 OR11H1Q8NG94 326 aa12.95□□□□□ -0.34
RABGGTA-201ENST00000216840 J3KRW8 73 aa12.94□□□□□ -0.34
RABGGTA-201ENST00000216840 K7EQG2 157 aa12.94□□□□□ -0.34
RABGGTA-201ENST00000216840 CD33P20138 364 aa12.94□□□□□ -0.34
RABGGTA-201ENST00000216840 KHDC1LQ5JSQ8 128 aa12.94□□□□□ -0.34
RABGGTA-201ENST00000216840 FAM19A2Q8N3H0 131 aa12.94□□□□□ -0.34
RABGGTA-201ENST00000216840 TRBV7-9A0A0J9YWB2 115 aa12.93□□□□□ -0.34
RABGGTA-201ENST00000216840 FAM104BQ5XKR9 115 aa12.93□□□□□ -0.34
RABGGTA-201ENST00000216840 RNASEKQ6P5S7 137 aaKnown RBP12.93□□□□□ -0.34
RABGGTA-201ENST00000216840 APRG1Q8IVJ8 170 aa12.93□□□□□ -0.34
RABGGTA-201ENST00000216840 OR1N2Q8NGR9 330 aa12.93□□□□□ -0.34
RABGGTA-201ENST00000216840 HECTD1Q9ULT8 2610 aa12.93□□□□□ -0.34
RABGGTA-201ENST00000216840 HIST2H2BDQ6DRA6 164 aa12.93□□□□□ -0.34
RABGGTA-201ENST00000216840 DPF1Q92782 380 aa12.93□□□□□ -0.34
RABGGTA-201ENST00000216840 MSRB1Q9NZV6 116 aa12.93□□□□□ -0.34
RABGGTA-201ENST00000216840 M0QZ24 198 aa12.92□□□□□ -0.34
RABGGTA-201ENST00000216840 SCGB1D1O95968 90 aa12.92□□□□□ -0.34
RABGGTA-201ENST00000216840 RNASE1P07998 156 aaKnown RBP12.92□□□□□ -0.34
RABGGTA-201ENST00000216840 ZNF688P0C7X2 276 aa12.92□□□□□ -0.34
RABGGTA-201ENST00000216840 AMN1Q8IY45 258 aa12.92□□□□□ -0.34
RABGGTA-201ENST00000216840 KLHL30-AS1Q8NEE0 82 aa12.92□□□□□ -0.34
RABGGTA-201ENST00000216840 DUX3Q96PT4 197 aa12.92□□□□□ -0.34
RABGGTA-201ENST00000216840 TMEM160Q9NX00 188 aa12.92□□□□□ -0.34
RABGGTA-201ENST00000216840 RNF114Q9Y508 228 aa12.92□□□□□ -0.34
RABGGTA-201ENST00000216840 TRAV21A0A0B4J279 112 aa12.92□□□□□ -0.34
RABGGTA-201ENST00000216840 HSBP1O75506 76 aa12.92□□□□□ -0.34
RABGGTA-201ENST00000216840 SCGB2A2Q13296 93 aa12.92□□□□□ -0.34
RABGGTA-201ENST00000216840 PSMG4Q5JS54 123 aa12.92□□□□□ -0.34
RABGGTA-201ENST00000216840 RNASE4P34096 147 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-201ENST00000216840 SNRPD3P62318 126 aaKnown RBP12.91□□□□□ -0.34
RABGGTA-201ENST00000216840 KIR3DS1Q14943 382 aa12.91□□□□□ -0.34
RABGGTA-201ENST00000216840 SMR3AQ99954 134 aa12.91□□□□□ -0.34
RABGGTA-201ENST00000216840 NAGKQ9UJ70 344 aa12.91□□□□□ -0.34
RABGGTA-201ENST00000216840 U3KQK5 164 aa12.91□□□□□ -0.34
RABGGTA-201ENST00000216840 TMEM191AQ9H0A3 160 aa12.9□□□□□ -0.34
RABGGTA-201ENST00000216840 MRPL51Q4U2R6 128 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-201ENST00000216840 WFDC12Q8WWY7 111 aa12.9□□□□□ -0.34
RABGGTA-201ENST00000216840 CHCHD1Q96BP2 118 aaKnown RBP12.9□□□□□ -0.34
RABGGTA-201ENST00000216840 D6R8Y8 96 aa12.89□□□□□ -0.35
RABGGTA-201ENST00000216840 DMRTA1Q5VZB9 504 aa12.89□□□□□ -0.35
RABGGTA-201ENST00000216840 OR9G4Q8NGQ1 327 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms