RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 M6PRP20645 277 aa12.52□□□□□ -0.41
PTPN11-207ENST00000639857 ACOT6Q3I5F7 207 aaPredicted RBP12.52□□□□□ -0.41
PTPN11-207ENST00000639857 TMEM78Q5T7P6 136 aa12.52□□□□□ -0.41
PTPN11-207ENST00000639857 ZNF503Q96F45 646 aa12.52□□□□□ -0.41
PTPN11-207ENST00000639857 LINC00467Q9BRT7 94 aa12.52□□□□□ -0.41
PTPN11-207ENST00000639857 AGPAT4-IT1Q9H0P7 198 aa12.52□□□□□ -0.41
PTPN11-207ENST00000639857 WFDC1Q9HC57 220 aa12.52□□□□□ -0.41
PTPN11-207ENST00000639857 DNAH6Q9C0G6 4158 aa12.51□□□□□ -0.41
PTPN11-207ENST00000639857 TRAV12-3A0A0B4J271 114 aa12.51□□□□□ -0.41
PTPN11-207ENST00000639857 RBAKDNA6NC62 111 aa12.51□□□□□ -0.41
PTPN11-207ENST00000639857 ATP5G1P05496 136 aa12.51□□□□□ -0.41
PTPN11-207ENST00000639857 DEFB130BP0DP73 79 aa12.51□□□□□ -0.41
PTPN11-207ENST00000639857 DEFB130AP0DP74 79 aa12.51□□□□□ -0.41
PTPN11-207ENST00000639857 CSN1S1P47710 185 aa12.51□□□□□ -0.41
PTPN11-207ENST00000639857 ATP5G3P48201 142 aa12.51□□□□□ -0.41
PTPN11-207ENST00000639857 FAM122CQ6P4D5 195 aa12.51□□□□□ -0.41
PTPN11-207ENST00000639857 PQLC2Q6ZP29 291 aa12.51□□□□□ -0.41
PTPN11-207ENST00000639857 PHYHIPLQ96FC7 376 aa12.51□□□□□ -0.41
PTPN11-207ENST00000639857 ERCC8Q13216 396 aa12.5□□□□□ -0.41
PTPN11-207ENST00000639857 TMEM88Q6PEY1 159 aa12.5□□□□□ -0.41
PTPN11-207ENST00000639857 LINC00612Q8N6U2 182 aa12.5□□□□□ -0.41
PTPN11-207ENST00000639857 ZNF680Q8NEM1 530 aa12.5□□□□□ -0.41
PTPN11-207ENST00000639857 OR2G3Q8NGZ4 309 aa12.5□□□□□ -0.41
PTPN11-207ENST00000639857 NOP10Q9NPE3 64 aaKnown RBP12.5□□□□□ -0.41
PTPN11-207ENST00000639857 IGKV2-40A0A087WW87 121 aaPredicted RBP12.49□□□□□ -0.41
PTPN11-207ENST00000639857 A0A1W2PPV4 95 aa12.49□□□□□ -0.41
PTPN11-207ENST00000639857 SNURFLB1AK76 121 aa12.49□□□□□ -0.41
PTPN11-207ENST00000639857 J3KRW8 73 aa12.49□□□□□ -0.41
PTPN11-207ENST00000639857 IGKV2D-40P01614 121 aaPredicted RBP12.49□□□□□ -0.41
PTPN11-207ENST00000639857 RGS21Q2M5E4 152 aa12.49□□□□□ -0.41
PTPN11-207ENST00000639857 RNF212Q495C1 297 aa12.49□□□□□ -0.41
PTPN11-207ENST00000639857 RXFP4Q8TDU9 374 aa12.49□□□□□ -0.41
PTPN11-207ENST00000639857 PSMG3Q9BT73 122 aaPredicted RBP12.49□□□□□ -0.41
PTPN11-207ENST00000639857 Q9H3A6 140 aa12.49□□□□□ -0.41
PTPN11-207ENST00000639857 ZNF492Q9P255 531 aa12.49□□□□□ -0.41
PTPN11-207ENST00000639857 ZNF324O75467 553 aaPredicted RBP12.48□□□□□ -0.41
PTPN11-207ENST00000639857 GPX1P07203 203 aa12.48□□□□□ -0.41
PTPN11-207ENST00000639857 ZNF138P52744 262 aa12.48□□□□□ -0.41
PTPN11-207ENST00000639857 RANP62826 216 aaKnown RBP12.48□□□□□ -0.41
PTPN11-207ENST00000639857 DAZ2Q13117 558 aaKnown RBP12.48□□□□□ -0.41
PTPN11-207ENST00000639857 ZFAND2AQ8N6M9 145 aa12.48□□□□□ -0.41
PTPN11-207ENST00000639857 ARL6IP6Q8N6S5 226 aa12.48□□□□□ -0.41
PTPN11-207ENST00000639857 NACAE9PAV3 2078 aa12.47□□□□□ -0.41
PTPN11-207ENST00000639857 FAM3BP58499 235 aaPredicted RBP12.47□□□□□ -0.41
PTPN11-207ENST00000639857 ANXA2RQ3ZCQ2 193 aa12.47□□□□□ -0.41
PTPN11-207ENST00000639857 FAM74A1Q5RGS3 127 aa12.47□□□□□ -0.41
PTPN11-207ENST00000639857 VGLL1Q99990 258 aa12.47□□□□□ -0.41
PTPN11-207ENST00000639857 OTORQ9NRC9 128 aa12.47□□□□□ -0.41
PTPN11-207ENST00000639857 LENEPQ9Y5L5 61 aa12.47□□□□□ -0.41
PTPN11-207ENST00000639857 F5H768 121 aa12.46□□□□□ -0.41
PTPN11-207ENST00000639857 MBP02144 154 aa12.46□□□□□ -0.41
PTPN11-207ENST00000639857 RAB2AP61019 212 aa12.46□□□□□ -0.41
PTPN11-207ENST00000639857 SERF2P84101 59 aa12.46□□□□□ -0.41
PTPN11-207ENST00000639857 CD300CQ08708 224 aa12.46□□□□□ -0.41
PTPN11-207ENST00000639857 BTN1A1Q13410 526 aa12.46□□□□□ -0.41
PTPN11-207ENST00000639857 UBE2DNLQ8IWF7 75 aa12.46□□□□□ -0.41
PTPN11-207ENST00000639857 EIF4E3Q8N5X7 224 aaKnown RBP12.46□□□□□ -0.41
PTPN11-207ENST00000639857 INO80EQ8NBZ0 244 aaPredicted RBP12.46□□□□□ -0.41
PTPN11-207ENST00000639857 OR10G4Q8NGN3 311 aa12.46□□□□□ -0.41
PTPN11-207ENST00000639857 OR10G9Q8NGN4 311 aa12.46□□□□□ -0.41
PTPN11-207ENST00000639857 OR10G7Q8NGN6 311 aa12.46□□□□□ -0.41
PTPN11-207ENST00000639857 TMED6Q8WW62 240 aa12.46□□□□□ -0.41
PTPN11-207ENST00000639857 BIRC6Q9NR09 4857 aa12.45□□□□□ -0.42
PTPN11-207ENST00000639857 DIRC3C9JPN6 131 aa12.45□□□□□ -0.42
PTPN11-207ENST00000639857 IBA57Q5T440 356 aaKnown RBP12.45□□□□□ -0.42
PTPN11-207ENST00000639857 C18orf15Q96N68 181 aa12.45□□□□□ -0.42
PTPN11-207ENST00000639857 RNASE4P34096 147 aaKnown RBP12.44□□□□□ -0.42
PTPN11-207ENST00000639857 CDC34P49427 236 aaPredicted RBP12.44□□□□□ -0.42
PTPN11-207ENST00000639857 HSD17B11Q8NBQ5 300 aa12.44□□□□□ -0.42
PTPN11-207ENST00000639857 C11orf72Q8NBR9 251 aa12.44□□□□□ -0.42
PTPN11-207ENST00000639857 FRAS1Q86XX4 4008 aa12.43□□□□□ -0.42
PTPN11-207ENST00000639857 ATP6V0CP27449 155 aa12.43□□□□□ -0.42
PTPN11-207ENST00000639857 LGALS9BQ3B8N2 356 aa12.43□□□□□ -0.42
PTPN11-207ENST00000639857 Q5BKY6 102 aa12.43□□□□□ -0.42
PTPN11-207ENST00000639857 OR2T35Q8NGX2 323 aa12.43□□□□□ -0.42
PTPN11-207ENST00000639857 CMTM2Q8TAZ6 248 aa12.43□□□□□ -0.42
PTPN11-207ENST00000639857 GNPNAT1Q96EK6 184 aaPredicted RBP12.43□□□□□ -0.42
PTPN11-207ENST00000639857 TNFSF18Q9UNG2 199 aa12.43□□□□□ -0.42
PTPN11-207ENST00000639857 BORCS7-ASMTA0A0B4J1R7 106 aa12.42□□□□□ -0.42
PTPN11-207ENST00000639857 RNF222A6NCQ9 220 aa12.42□□□□□ -0.42
PTPN11-207ENST00000639857 RGS13O14921 159 aa12.42□□□□□ -0.42
PTPN11-207ENST00000639857 STAG3L2P0CL84 134 aa12.42□□□□□ -0.42
PTPN11-207ENST00000639857 STAG3L3P0CL85 134 aa12.42□□□□□ -0.42
PTPN11-207ENST00000639857 TCL1AP56279 114 aa12.42□□□□□ -0.42
PTPN11-207ENST00000639857 PRR9Q5T870 116 aa12.42□□□□□ -0.42
PTPN11-207ENST00000639857 LINC00336Q6ZUF6 198 aa12.42□□□□□ -0.42
PTPN11-207ENST00000639857 Q8TAT8 98 aa12.42□□□□□ -0.42
PTPN11-207ENST00000639857 IGHV1OR15-1A0A075B7D0 117 aa12.41□□□□□ -0.42
PTPN11-207ENST00000639857 FXYD6-FXYD2A0A087WZ82 144 aa12.41□□□□□ -0.42
PTPN11-207ENST00000639857 SERTM2A0A1B0GWG4 89 aa12.41□□□□□ -0.42
PTPN11-207ENST00000639857 GAGE12BA1L429 117 aa12.41□□□□□ -0.42
PTPN11-207ENST00000639857 PGPA6NDG6 321 aa12.41□□□□□ -0.42
PTPN11-207ENST00000639857 H3BNG1 76 aa12.41□□□□□ -0.42
PTPN11-207ENST00000639857 GAGE7O76087 117 aa12.41□□□□□ -0.42
PTPN11-207ENST00000639857 GAGE12FP0CL80 117 aa12.41□□□□□ -0.42
PTPN11-207ENST00000639857 GAGE12GP0CL81 117 aa12.41□□□□□ -0.42
PTPN11-207ENST00000639857 GAGE12IP0CL82 117 aa12.41□□□□□ -0.42
PTPN11-207ENST00000639857 ARL14EPLP0DKL9 152 aa12.41□□□□□ -0.42
PTPN11-207ENST00000639857 Q6AWC8 147 aa12.41□□□□□ -0.42
PTPN11-207ENST00000639857 SUN5Q8TC36 379 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms