RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 ZNF124Q15973 351 aa11.47□□□□□ -0.57
SCARB2-216ENST00000639300 OR2K2Q8NGT1 345 aa11.47□□□□□ -0.57
SCARB2-216ENST00000639300 RITA1Q96K30 269 aa11.47□□□□□ -0.57
SCARB2-216ENST00000639300 ZNF815PA8K554 130 aa11.46□□□□□ -0.57
SCARB2-216ENST00000639300 DLEU1O43261 78 aa11.46□□□□□ -0.57
SCARB2-216ENST00000639300 LINC00477Q96M19 166 aa11.46□□□□□ -0.57
SCARB2-216ENST00000639300 RCHY1Q96PM5 261 aa11.46□□□□□ -0.57
SCARB2-216ENST00000639300 ZNF492Q9P255 531 aa11.46□□□□□ -0.57
SCARB2-216ENST00000639300 A0A0U1RRA0 63 aa11.46□□□□□ -0.58
SCARB2-216ENST00000639300 FAM231DQ6ZW35 169 aa11.46□□□□□ -0.58
SCARB2-216ENST00000639300 ZNF491Q8N8L2 437 aa11.46□□□□□ -0.58
SCARB2-216ENST00000639300 PROP1O75360 226 aa11.45□□□□□ -0.58
SCARB2-216ENST00000639300 LCNL1Q6ZST4 164 aa11.45□□□□□ -0.58
SCARB2-216ENST00000639300 STHQ8IWL8 128 aa11.45□□□□□ -0.58
SCARB2-216ENST00000639300 FAM110DQ8TAY7 271 aaPredicted RBP11.45□□□□□ -0.58
SCARB2-216ENST00000639300 TANC2Q9HCD6 1990 aa11.45□□□□□ -0.58
SCARB2-216ENST00000639300 NBL1P41271 181 aa11.45□□□□□ -0.58
SCARB2-216ENST00000639300 BCL6BQ8N143 479 aaPredicted RBP11.45□□□□□ -0.58
SCARB2-216ENST00000639300 PRR25Q96S07 402 aa11.45□□□□□ -0.58
SCARB2-216ENST00000639300 MEGF9Q9H1U4 602 aa11.45□□□□□ -0.58
SCARB2-216ENST00000639300 A0A087WWL8 130 aa11.45□□□□□ -0.58
SCARB2-216ENST00000639300 SYNJ2BPP57105 145 aa11.45□□□□□ -0.58
SCARB2-216ENST00000639300 THAP8Q8NA92 274 aa11.45□□□□□ -0.58
SCARB2-216ENST00000639300 ZNF876PQ49A33 203 aa11.45□□□□□ -0.58
SCARB2-216ENST00000639300 ZC2HC1AQ96GY0 325 aa11.45□□□□□ -0.58
SCARB2-216ENST00000639300 USMG5Q96IX5 58 aa11.45□□□□□ -0.58
SCARB2-216ENST00000639300 GFRA4Q9GZZ7 299 aa11.45□□□□□ -0.58
SCARB2-216ENST00000639300 HLA-DMBP28068 263 aa11.44□□□□□ -0.58
SCARB2-216ENST00000639300 IL17RELQ6ZVW7 336 aa11.44□□□□□ -0.58
SCARB2-216ENST00000639300 TMEM75Q8N9X5 138 aa11.44□□□□□ -0.58
SCARB2-216ENST00000639300 C20orf144Q9BQM9 153 aa11.44□□□□□ -0.58
SCARB2-216ENST00000639300 IGHV2-70DA0A0C4DH43 119 aa11.44□□□□□ -0.58
SCARB2-216ENST00000639300 SMIM27A0A1W2PRY6 76 aa11.44□□□□□ -0.58
SCARB2-216ENST00000639300 TNFRSF6BO95407 300 aa11.44□□□□□ -0.58
SCARB2-216ENST00000639300 IGKV1OR2-108A0A075B7D4 117 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 MSMBP08118 114 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 HSD52Q0P140 79 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 CT83Q5H943 113 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 FAM104BQ5XKR9 115 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 PRSS57Q6UWY2 283 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 DPH3P1Q9H4G8 78 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 MKI67P46013 3256 aaKnown RBP11.43□□□□□ -0.58
SCARB2-216ENST00000639300 FAM231BA6NCW3 169 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 UTF1Q5T230 341 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 OR13C6PQ8NH95 151 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 DAZ1Q9NQZ3 744 aaKnown RBP11.43□□□□□ -0.58
SCARB2-216ENST00000639300 ZFYVE26Q68DK2 2539 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 IGHV1-69DA0A0B4J2H0 117 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 E7EUB6 86 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 IGHV1-69P01742 117 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 VGLL1Q99990 258 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 TDGF1P3P51864 188 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 SEC11AP67812 179 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 FAM120AOSQ5T036 256 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 PYGO2Q9BRQ0 406 aa11.43□□□□□ -0.58
SCARB2-216ENST00000639300 RNF223E7ERA6 249 aa11.42□□□□□ -0.58
SCARB2-216ENST00000639300 H3BRN7 92 aa11.42□□□□□ -0.58
SCARB2-216ENST00000639300 NUPR1O60356 82 aa11.42□□□□□ -0.58
SCARB2-216ENST00000639300 CSTL1Q9H114 145 aa11.42□□□□□ -0.58
SCARB2-216ENST00000639300 JMJD1CQ15652 2540 aa11.42□□□□□ -0.58
SCARB2-216ENST00000639300 RNASE1P07998 156 aaKnown RBP11.42□□□□□ -0.58
SCARB2-216ENST00000639300 PATE2Q6UY27 113 aa11.42□□□□□ -0.58
SCARB2-216ENST00000639300 IGLC2P0DOY2 106 aa11.42□□□□□ -0.58
SCARB2-216ENST00000639300 IGLC3P0DOY3 106 aa11.42□□□□□ -0.58
SCARB2-216ENST00000639300 HTN3P15516 51 aa11.42□□□□□ -0.58
SCARB2-216ENST00000639300 C11orf1Q9H5F2 150 aa11.42□□□□□ -0.58
SCARB2-216ENST00000639300 CD28P10747 220 aa11.42□□□□□ -0.58
SCARB2-216ENST00000639300 DSCR9P59020 149 aa11.42□□□□□ -0.58
SCARB2-216ENST00000639300 TRAV2A0A0B4J234 112 aa11.41□□□□□ -0.58
SCARB2-216ENST00000639300 FAM223BA6NKX1 122 aa11.41□□□□□ -0.58
SCARB2-216ENST00000639300 FAM223AQ8IWN6 122 aa11.41□□□□□ -0.58
SCARB2-216ENST00000639300 OR9G4Q8NGQ1 327 aa11.41□□□□□ -0.58
SCARB2-216ENST00000639300 TMEM190Q8WZ59 177 aa11.41□□□□□ -0.58
SCARB2-216ENST00000639300 IGKV1-17P01599 117 aa11.41□□□□□ -0.58
SCARB2-216ENST00000639300 IGLL1P15814 213 aa11.41□□□□□ -0.58
SCARB2-216ENST00000639300 C8orf86Q6ZUL3 223 aa11.41□□□□□ -0.58
SCARB2-216ENST00000639300 TMEM101Q96IK0 257 aa11.41□□□□□ -0.58
SCARB2-216ENST00000639300 ZNF479Q96JC4 524 aa11.41□□□□□ -0.58
SCARB2-216ENST00000639300 TMEM14CQ9P0S9 112 aa11.41□□□□□ -0.58
SCARB2-216ENST00000639300 KMT2EQ8IZD2 1858 aa11.41□□□□□ -0.58
SCARB2-216ENST00000639300 MRPL36Q9P0J6 103 aaKnown RBP11.4□□□□□ -0.58
SCARB2-216ENST00000639300 TRGV11A0A075B6L2 103 aa11.4□□□□□ -0.58
SCARB2-216ENST00000639300 BRWD1-AS2P59051 145 aa11.4□□□□□ -0.58
SCARB2-216ENST00000639300 MRPL51Q4U2R6 128 aaKnown RBP11.4□□□□□ -0.58
SCARB2-216ENST00000639300 SMPXQ9UHP9 88 aa11.4□□□□□ -0.58
SCARB2-216ENST00000639300 ARHGAP32A7KAX9 2087 aa11.4□□□□□ -0.58
SCARB2-216ENST00000639300 BRCA2P51587 3418 aa11.4□□□□□ -0.58
SCARB2-216ENST00000639300 C22orf34Q6ZV56 151 aa11.4□□□□□ -0.58
SCARB2-216ENST00000639300 UBE2E2Q96LR5 201 aa11.4□□□□□ -0.59
SCARB2-216ENST00000639300 ABCA12Q86UK0 2595 aa11.39□□□□□ -0.59
SCARB2-216ENST00000639300 ODF3L1Q8IXM7 274 aa11.39□□□□□ -0.59
SCARB2-216ENST00000639300 SAMD5Q5TGI4 173 aa11.39□□□□□ -0.59
SCARB2-216ENST00000639300 NCKAP5O14513 1909 aa11.39□□□□□ -0.59
SCARB2-216ENST00000639300 IGHV1-24A0A0C4DH33 117 aa11.39□□□□□ -0.59
SCARB2-216ENST00000639300 FRMD6-AS1P0C7T7 363 aa11.39□□□□□ -0.59
SCARB2-216ENST00000639300 PRSS46E5RG02 174 aa11.38□□□□□ -0.59
SCARB2-216ENST00000639300 DOPEY1Q5JWR5 2465 aa11.38□□□□□ -0.59
SCARB2-216ENST00000639300 KNCNA6PVL3 124 aa11.38□□□□□ -0.59
SCARB2-216ENST00000639300 H3BRM9 83 aa11.38□□□□□ -0.59
SCARB2-216ENST00000639300 DEFB131AP59861 70 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms