RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 ATP6V0E1O15342 81 aa6.26□□□□□ -1.41
GPC3-204ENST00000631057 ZNF138P52744 262 aa6.26□□□□□ -1.41
GPC3-204ENST00000631057 LMO4P61968 165 aa6.26□□□□□ -1.41
GPC3-204ENST00000631057 LINC01545Q5VT33 79 aa6.26□□□□□ -1.41
GPC3-204ENST00000631057 C8orf86Q6ZUL3 223 aa6.26□□□□□ -1.41
GPC3-204ENST00000631057 ORMDL3Q8N138 153 aa6.26□□□□□ -1.41
GPC3-204ENST00000631057 STPG4Q8N801 248 aa6.26□□□□□ -1.41
GPC3-204ENST00000631057 FER1L6-AS1Q8NA97 138 aa6.26□□□□□ -1.41
GPC3-204ENST00000631057 EEF1AKMT3Q96AZ1 226 aa6.26□□□□□ -1.41
GPC3-204ENST00000631057 PRELID3AQ96N28 172 aa6.26□□□□□ -1.41
GPC3-204ENST00000631057 MS4A6AQ9H2W1 248 aa6.26□□□□□ -1.41
GPC3-204ENST00000631057 GOLT1BQ9Y3E0 138 aa6.26□□□□□ -1.41
GPC3-204ENST00000631057 TRBV7-1A0A0A6YYK4 115 aa6.25□□□□□ -1.41
GPC3-204ENST00000631057 CENPVL3A0A0U1RRI6 287 aa6.25□□□□□ -1.41
GPC3-204ENST00000631057 TMEM213A2RRL7 107 aa6.25□□□□□ -1.41
GPC3-204ENST00000631057 RBAKDNA6NC62 111 aa6.25□□□□□ -1.41
GPC3-204ENST00000631057 D6R8Y8 96 aa6.25□□□□□ -1.41
GPC3-204ENST00000631057 TNFRSF6BO95407 300 aa6.25□□□□□ -1.41
GPC3-204ENST00000631057 IGHG4P01861 327 aa6.25□□□□□ -1.41
GPC3-204ENST00000631057 IGLC6P0CF74 106 aa6.25□□□□□ -1.41
GPC3-204ENST00000631057 PRB4P10163 310 aaPredicted RBP6.25□□□□□ -1.41
GPC3-204ENST00000631057 TFPI2P48307 235 aa6.25□□□□□ -1.41
GPC3-204ENST00000631057 KHDC1LQ5JSQ8 128 aa6.25□□□□□ -1.41
GPC3-204ENST00000631057 Q8TAT8 98 aa6.25□□□□□ -1.41
GPC3-204ENST00000631057 VGLL1Q99990 258 aa6.25□□□□□ -1.41
GPC3-204ENST00000631057 ZNF747Q9BV97 191 aa6.25□□□□□ -1.41
GPC3-204ENST00000631057 ABCA2Q9BZC7 2435 aa6.24□□□□□ -1.41
GPC3-204ENST00000631057 FABP5P3A8MUU1 101 aa6.24□□□□□ -1.41
GPC3-204ENST00000631057 BUB3O43684 328 aa6.24□□□□□ -1.41
GPC3-204ENST00000631057 CLEC3BP05452 202 aa6.24□□□□□ -1.41
GPC3-204ENST00000631057 HINT1P49773 126 aaPredicted RBP6.24□□□□□ -1.41
GPC3-204ENST00000631057 MRPL51Q4U2R6 128 aaKnown RBP6.24□□□□□ -1.41
GPC3-204ENST00000631057 SLC25A34Q6PIV7 304 aa6.24□□□□□ -1.41
GPC3-204ENST00000631057 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.24□□□□□ -1.41
GPC3-204ENST00000631057 ITLN2Q8WWU7 325 aaPredicted RBP6.24□□□□□ -1.41
GPC3-204ENST00000631057 MRPL53Q96EL3 112 aaKnown RBP6.24□□□□□ -1.41
GPC3-204ENST00000631057 METTL26Q96S19 204 aa6.24□□□□□ -1.41
GPC3-204ENST00000631057 ATP6V0BQ99437 205 aa6.24□□□□□ -1.41
GPC3-204ENST00000631057 BPESC1Q9GZL8 116 aa6.24□□□□□ -1.41
GPC3-204ENST00000631057 SIGLEC8Q9NYZ4 499 aa6.24□□□□□ -1.41
GPC3-204ENST00000631057 IGHV3-35A0A0C4DH35 117 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 hDV102S1A0JD36 115 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 ORM1P02763 201 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 HLA-DMBP28068 263 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 CKS2P33552 79 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 IFI27P40305 119 aaPredicted RBP6.23□□□□□ -1.41
GPC3-204ENST00000631057 ZNF80P51504 273 aaPredicted RBP6.23□□□□□ -1.41
GPC3-204ENST00000631057 TWIST1Q15672 202 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 IGFL4Q6B9Z1 124 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 CLEC19AQ6UXS0 136 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 AMN1Q8IY45 258 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 C5orf56Q8N8D9 126 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 ORAOV1Q8WV07 137 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 PMCHL2Q9BQD1 86 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 MOB4Q9Y3A3 225 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 IGHV3OR16-8A0A075B7F1 116 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 CLPSL1A2RUU4 121 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 FAM223BA6NKX1 122 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 G3V318 75 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 HBDP02042 147 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 PPBPP02775 128 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 NPSP0C0P6 89 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 HIST1H1AQ02539 215 aaPredicted RBP6.23□□□□□ -1.41
GPC3-204ENST00000631057 ATP5G2Q06055 141 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 FAM223AQ8IWN6 122 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 CNFNQ9BYD5 112 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 SCRT2Q9NQ03 307 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 HIF1ANQ9NWT6 349 aa6.23□□□□□ -1.41
GPC3-204ENST00000631057 TIMM8BQ9Y5J9 83 aaPredicted RBP6.23□□□□□ -1.41
GPC3-204ENST00000631057 LOC389332A0A1B0GUA5 103 aa6.22□□□□□ -1.41
GPC3-204ENST00000631057 H0Y8G0 127 aa6.22□□□□□ -1.41
GPC3-204ENST00000631057 FOSL1P15407 271 aa6.22□□□□□ -1.41
GPC3-204ENST00000631057 CRIP2P52943 208 aaPredicted RBP6.22□□□□□ -1.41
GPC3-204ENST00000631057 PAX8Q06710 450 aa6.22□□□□□ -1.41
GPC3-204ENST00000631057 ERCC8Q13216 396 aa6.22□□□□□ -1.41
GPC3-204ENST00000631057 TMEM78Q5T7P6 136 aa6.22□□□□□ -1.41
GPC3-204ENST00000631057 DPF1Q92782 380 aa6.22□□□□□ -1.41
GPC3-204ENST00000631057 NPFFR1Q9GZQ6 430 aa6.22□□□□□ -1.41
GPC3-204ENST00000631057 COX11Q9Y6N1 276 aa6.22□□□□□ -1.41
GPC3-204ENST00000631057 U3KQE9 123 aa6.22□□□□□ -1.41
GPC3-204ENST00000631057 CHD8Q9HCK8 2581 aa6.21□□□□□ -1.41
GPC3-204ENST00000631057 A0A096LNJ9 63 aa6.21□□□□□ -1.42
GPC3-204ENST00000631057 TRAV41A0A0B4J266 112 aa6.21□□□□□ -1.42
GPC3-204ENST00000631057 IGHV1-69DA0A0B4J2H0 117 aa6.21□□□□□ -1.42
GPC3-204ENST00000631057 MUC21A0A0G2JKD1 596 aa6.21□□□□□ -1.42
GPC3-204ENST00000631057 MUC21A0A140T8X8 626 aa6.21□□□□□ -1.42
GPC3-204ENST00000631057 PRAC2D3DTV9 90 aa6.21□□□□□ -1.42
GPC3-204ENST00000631057 NPYP01303 97 aa6.21□□□□□ -1.42
GPC3-204ENST00000631057 IGHV1-69P01742 117 aa6.21□□□□□ -1.42
GPC3-204ENST00000631057 IGHV4-39P01824 125 aa6.21□□□□□ -1.42
GPC3-204ENST00000631057 LGALS9BQ3B8N2 356 aa6.21□□□□□ -1.42
GPC3-204ENST00000631057 C19orf54Q5BKX5 351 aa6.21□□□□□ -1.42
GPC3-204ENST00000631057 MUC21Q5SSG8 566 aa6.21□□□□□ -1.42
GPC3-204ENST00000631057 LGALS9CQ6DKI2 356 aa6.21□□□□□ -1.42
GPC3-204ENST00000631057 C12orf54Q6X4T0 127 aa6.21□□□□□ -1.42
GPC3-204ENST00000631057 RNF182Q8N6D2 247 aa6.21□□□□□ -1.42
GPC3-204ENST00000631057 ZNF738Q8NE65 137 aa6.21□□□□□ -1.42
GPC3-204ENST00000631057 OR8A1Q8NGG7 326 aa6.21□□□□□ -1.42
GPC3-204ENST00000631057 PIMREGQ9BSJ6 248 aa6.21□□□□□ -1.42
GPC3-204ENST00000631057 MAP1LC3AQ9H492 121 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms