RNA–Protein interactions for RNA: ENST00000610535.4

TNIP1-220, Transcript of TNFAIP3 interacting protein 1, humanhuman

TSL 5 BASIC

Gene TNIP1, Length 2,726 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-220ENST00000610535 K7ERJ3 54 aa13.22□□□□□ -0.29
TNIP1-220ENST00000610535 COL25A1Q9BXS0 654 aaPredicted RBP13.22□□□□□ -0.29
TNIP1-220ENST00000610535 PRRG2O14669 202 aa13.21□□□□□ -0.29
TNIP1-220ENST00000610535 PDE6HQ13956 83 aa13.21□□□□□ -0.29
TNIP1-220ENST00000610535 ONECUT1Q9UBC0 465 aa13.21□□□□□ -0.29
TNIP1-220ENST00000610535 EVI2AP22794 236 aa13.21□□□□□ -0.29
TNIP1-220ENST00000610535 NEGR1Q7Z3B1 354 aa13.21□□□□□ -0.29
TNIP1-220ENST00000610535 FANCD2OSQ96PS1 177 aa13.21□□□□□ -0.29
TNIP1-220ENST00000610535 F8W735 103 aaPredicted RBP13.2□□□□□ -0.3
TNIP1-220ENST00000610535 ORM1P02763 201 aa13.2□□□□□ -0.3
TNIP1-220ENST00000610535 GATA1P15976 413 aaPredicted RBP13.2□□□□□ -0.3
TNIP1-220ENST00000610535 PPIFP30405 207 aaKnown RBP13.2□□□□□ -0.3
TNIP1-220ENST00000610535 LEPP41159 167 aa13.2□□□□□ -0.3
TNIP1-220ENST00000610535 FXYD2P54710 66 aa13.2□□□□□ -0.3
TNIP1-220ENST00000610535 RNF185Q96GF1 192 aa13.2□□□□□ -0.3
TNIP1-220ENST00000610535 FBLL1A6NHQ2 334 aaKnown RBP13.2□□□□□ -0.3
TNIP1-220ENST00000610535 RPL24P83731 157 aaKnown RBP13.2□□□□□ -0.3
TNIP1-220ENST00000610535 NPFFR1Q9GZQ6 430 aa13.2□□□□□ -0.3
TNIP1-220ENST00000610535 HHLA3Q9XRX5 114 aa13.2□□□□□ -0.3
TNIP1-220ENST00000610535 IGHV3-35A0A0C4DH35 117 aa13.19□□□□□ -0.3
TNIP1-220ENST00000610535 NBR2O15453 112 aa13.19□□□□□ -0.3
TNIP1-220ENST00000610535 IGLC6P0CF74 106 aa13.19□□□□□ -0.3
TNIP1-220ENST00000610535 RNF5Q99942 180 aa13.19□□□□□ -0.3
TNIP1-220ENST00000610535 SRSF8Q9BRL6 282 aaKnown RBP13.19□□□□□ -0.3
TNIP1-220ENST00000610535 IGHG4P01861 327 aa13.19□□□□□ -0.3
TNIP1-220ENST00000610535 FABP2P12104 132 aa13.19□□□□□ -0.3
TNIP1-220ENST00000610535 SAMD5Q5TGI4 173 aa13.19□□□□□ -0.3
TNIP1-220ENST00000610535 PRSS1P07477 247 aa13.19□□□□□ -0.3
TNIP1-220ENST00000610535 MFAP4P55083 255 aa13.19□□□□□ -0.3
TNIP1-220ENST00000610535 HES1Q14469 280 aa13.19□□□□□ -0.3
TNIP1-220ENST00000610535 SMAD5-AS1Q9Y6J3 95 aa13.19□□□□□ -0.3
TNIP1-220ENST00000610535 GOSR1O95249 250 aa13.18□□□□□ -0.3
TNIP1-220ENST00000610535 ODF1Q14990 250 aa13.18□□□□□ -0.3
TNIP1-220ENST00000610535 ZNF562Q6V9R5 426 aa13.18□□□□□ -0.3
TNIP1-220ENST00000610535 TMEM190Q8WZ59 177 aa13.18□□□□□ -0.3
TNIP1-220ENST00000610535 RAB1BQ9H0U4 201 aa13.18□□□□□ -0.3
TNIP1-220ENST00000610535 SMIM13P0DJ93 91 aa13.18□□□□□ -0.3
TNIP1-220ENST00000610535 MAP1LC3AQ9H492 121 aa13.18□□□□□ -0.3
TNIP1-220ENST00000610535 ERCC8Q13216 396 aa13.17□□□□□ -0.3
TNIP1-220ENST00000610535 IGF2-ASQ6U949 168 aa13.17□□□□□ -0.3
TNIP1-220ENST00000610535 IGLV11-55A0A075B6I3 123 aa13.17□□□□□ -0.3
TNIP1-220ENST00000610535 TNFRSF6BO95407 300 aa13.17□□□□□ -0.3
TNIP1-220ENST00000610535 KLRD1Q13241 179 aa13.17□□□□□ -0.3
TNIP1-220ENST00000610535 COX8CQ7Z4L0 72 aa13.17□□□□□ -0.3
TNIP1-220ENST00000610535 GTSCR1Q86UQ5 136 aa13.17□□□□□ -0.3
TNIP1-220ENST00000610535 BMI1P35226 326 aa13.16□□□□□ -0.3
TNIP1-220ENST00000610535 Q8NA96 180 aa13.16□□□□□ -0.3
TNIP1-220ENST00000610535 OR5A1Q8NGJ0 315 aa13.16□□□□□ -0.3
TNIP1-220ENST00000610535 C21orf62Q9NYP8 219 aa13.16□□□□□ -0.3
TNIP1-220ENST00000610535 CACNA1BQ00975 2339 aa13.16□□□□□ -0.3
TNIP1-220ENST00000610535 SPTBN1Q01082 2364 aaKnown RBP13.16□□□□□ -0.3
TNIP1-220ENST00000610535 RPL7P18124 248 aaKnown RBP13.16□□□□□ -0.3
TNIP1-220ENST00000610535 FCER1GP30273 86 aa13.16□□□□□ -0.3
TNIP1-220ENST00000610535 NBL1P41271 181 aa13.16□□□□□ -0.3
TNIP1-220ENST00000610535 NDPQ00604 133 aa13.16□□□□□ -0.3
TNIP1-220ENST00000610535 CFHR4Q92496 578 aa13.16□□□□□ -0.3
TNIP1-220ENST00000610535 AKAP6Q13023 2319 aa13.15□□□□□ -0.3
TNIP1-220ENST00000610535 TEX48A0A1B0GUV7 120 aa13.15□□□□□ -0.3
TNIP1-220ENST00000610535 LY6HO94772 140 aa13.15□□□□□ -0.3
TNIP1-220ENST00000610535 CHAC1Q9BUX1 264 aa13.15□□□□□ -0.3
TNIP1-220ENST00000610535 ZMAT4Q9H898 229 aa13.15□□□□□ -0.3
TNIP1-220ENST00000610535 DPM3Q9P2X0 92 aa13.15□□□□□ -0.3
TNIP1-220ENST00000610535 SPTAN1Q13813 2472 aaKnown RBP13.15□□□□□ -0.3
TNIP1-220ENST00000610535 S100A7AQ86SG5 101 aa13.15□□□□□ -0.3
TNIP1-220ENST00000610535 FOXC2Q99958 501 aa13.15□□□□□ -0.3
TNIP1-220ENST00000610535 NHP2Q9NX24 153 aaKnown RBP13.15□□□□□ -0.3
TNIP1-220ENST00000610535 MAP1AP78559 2803 aaPredicted RBP13.14□□□□□ -0.31
TNIP1-220ENST00000610535 PRAC2D3DTV9 90 aa13.14□□□□□ -0.31
TNIP1-220ENST00000610535 ZNF207O43670 478 aaKnown RBP13.14□□□□□ -0.31
TNIP1-220ENST00000610535 C5orf64Q2M2E5 130 aa13.14□□□□□ -0.31
TNIP1-220ENST00000610535 TMEM158Q8WZ71 300 aa13.14□□□□□ -0.31
TNIP1-220ENST00000610535 PSMG3-AS1Q96PY0 264 aa13.14□□□□□ -0.31
TNIP1-220ENST00000610535 MED13LQ71F56 2210 aa13.14□□□□□ -0.31
TNIP1-220ENST00000610535 DYNAPQ8N1N2 210 aa13.14□□□□□ -0.31
TNIP1-220ENST00000610535 TRBV25-1A0A075B6N4 114 aa13.13□□□□□ -0.31
TNIP1-220ENST00000610535 IGKCP01834 107 aa13.13□□□□□ -0.31
TNIP1-220ENST00000610535 CTSGP08311 255 aa13.13□□□□□ -0.31
TNIP1-220ENST00000610535 NPBQ8NG41 125 aa13.13□□□□□ -0.31
TNIP1-220ENST00000610535 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.13□□□□□ -0.31
TNIP1-220ENST00000610535 NCBP2LA6PVI3 153 aaKnown RBP13.13□□□□□ -0.31
TNIP1-220ENST00000610535 FABP5P3A8MUU1 101 aa13.13□□□□□ -0.31
TNIP1-220ENST00000610535 B9A039 149 aa13.13□□□□□ -0.31
TNIP1-220ENST00000610535 NDUFA3O95167 84 aa13.13□□□□□ -0.31
TNIP1-220ENST00000610535 ZC2HC1BQ5TFG8 222 aa13.13□□□□□ -0.31
TNIP1-220ENST00000610535 TMEM8BA6NDV4 472 aa13.12□□□□□ -0.31
TNIP1-220ENST00000610535 RNF182Q8N6D2 247 aa13.12□□□□□ -0.31
TNIP1-220ENST00000610535 DTX2Q86UW9 622 aa13.12□□□□□ -0.31
TNIP1-220ENST00000610535 PIFOQ8TCI5 191 aa13.12□□□□□ -0.31
TNIP1-220ENST00000610535 ARPC1AQ92747 370 aa13.12□□□□□ -0.31
TNIP1-220ENST00000610535 TMEM160Q9NX00 188 aa13.12□□□□□ -0.31
TNIP1-220ENST00000610535 ANKHD1Q8IWZ3 2542 aaKnown RBP13.12□□□□□ -0.31
TNIP1-220ENST00000610535 AGRNO00468 2067 aa13.12□□□□□ -0.31
TNIP1-220ENST00000610535 PHLDA1Q8WV24 401 aaPredicted RBP13.12□□□□□ -0.31
TNIP1-220ENST00000610535 NXT2Q9NPJ8 142 aaKnown RBP13.12□□□□□ -0.31
TNIP1-220ENST00000610535 TRAV40A0A0B4J280 105 aa13.11□□□□□ -0.31
TNIP1-220ENST00000610535 CNFNQ9BYD5 112 aa13.11□□□□□ -0.31
TNIP1-220ENST00000610535 HIGD1BQ9P298 99 aa13.11□□□□□ -0.31
TNIP1-220ENST00000610535 LINC01546A6NGU7 62 aa13.11□□□□□ -0.31
TNIP1-220ENST00000610535 CD3EP07766 207 aa13.11□□□□□ -0.31
TNIP1-220ENST00000610535 IL17RELQ6ZVW7 336 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms