RNA–Protein interactions for RNA: ENST00000585163.5

CDK5RAP3-237, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,519 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-237ENST00000585163 FER1L6-AS1Q8NA97 138 aa11.04□□□□□ -0.64
CDK5RAP3-237ENST00000585163 CD5LO43866 347 aa11.03□□□□□ -0.64
CDK5RAP3-237ENST00000585163 MINOS1Q5TGZ0 78 aa11.03□□□□□ -0.64
CDK5RAP3-237ENST00000585163 MINOS1-NBL1R4GNA1 71 aa11.03□□□□□ -0.64
CDK5RAP3-237ENST00000585163 PTPRQQ9UMZ3 2332 aa11.03□□□□□ -0.64
CDK5RAP3-237ENST00000585163 IGHV7-81A0A0B4J1V7 117 aa11.03□□□□□ -0.64
CDK5RAP3-237ENST00000585163 HBDP02042 147 aa11.03□□□□□ -0.64
CDK5RAP3-237ENST00000585163 TWIST1Q15672 202 aa11.03□□□□□ -0.64
CDK5RAP3-237ENST00000585163 IGFL4Q6B9Z1 124 aa11.03□□□□□ -0.64
CDK5RAP3-237ENST00000585163 FGF6P10767 208 aa11.02□□□□□ -0.64
CDK5RAP3-237ENST00000585163 CKS2P33552 79 aa11.02□□□□□ -0.64
CDK5RAP3-237ENST00000585163 SRSF2Q01130 221 aaKnown RBP11.02□□□□□ -0.64
CDK5RAP3-237ENST00000585163 FOXE3Q13461 319 aa11.02□□□□□ -0.64
CDK5RAP3-237ENST00000585163 ERASQ7Z444 233 aa11.02□□□□□ -0.64
CDK5RAP3-237ENST00000585163 CEP295Q9C0D2 2601 aa11.02□□□□□ -0.64
CDK5RAP3-237ENST00000585163 NPYP01303 97 aa11.02□□□□□ -0.65
CDK5RAP3-237ENST00000585163 HLA-DMBP28068 263 aa11.02□□□□□ -0.65
CDK5RAP3-237ENST00000585163 PSMG3-AS1Q96PY0 264 aa11.02□□□□□ -0.65
CDK5RAP3-237ENST00000585163 MSRB2Q9Y3D2 182 aa11.02□□□□□ -0.65
CDK5RAP3-237ENST00000585163 ADORA2A-AS1P86434 159 aa11.01□□□□□ -0.65
CDK5RAP3-237ENST00000585163 OR1N2Q8NGR9 330 aa11.01□□□□□ -0.65
CDK5RAP3-237ENST00000585163 CNFNQ9BYD5 112 aa11.01□□□□□ -0.65
CDK5RAP3-237ENST00000585163 MUC6Q6W4X9 2439 aa11.01□□□□□ -0.65
CDK5RAP3-237ENST00000585163 HRNRQ86YZ3 2850 aaPredicted RBP11.01□□□□□ -0.65
CDK5RAP3-237ENST00000585163 SNAI2O43623 268 aa11.01□□□□□ -0.65
CDK5RAP3-237ENST00000585163 Q8N9W7 124 aa11.01□□□□□ -0.65
CDK5RAP3-237ENST00000585163 IGHV3OR16-8A0A075B7F1 116 aa11□□□□□ -0.65
CDK5RAP3-237ENST00000585163 SMKR1H3BMG3 65 aa11□□□□□ -0.65
CDK5RAP3-237ENST00000585163 FXYD7P58549 80 aa11□□□□□ -0.65
CDK5RAP3-237ENST00000585163 CACNG7P62955 275 aa11□□□□□ -0.65
CDK5RAP3-237ENST00000585163 NPFFR1Q9GZQ6 430 aa11□□□□□ -0.65
CDK5RAP3-237ENST00000585163 PTPRZ1P23471 2315 aaPredicted RBP11□□□□□ -0.65
CDK5RAP3-237ENST00000585163 PF4V1P10720 104 aa11□□□□□ -0.65
CDK5RAP3-237ENST00000585163 ZFP36P26651 326 aaKnown RBP11□□□□□ -0.65
CDK5RAP3-237ENST00000585163 IGHV3-35A0A0C4DH35 117 aa10.99□□□□□ -0.65
CDK5RAP3-237ENST00000585163 FABP5P3A8MUU1 101 aa10.99□□□□□ -0.65
CDK5RAP3-237ENST00000585163 ORM1P02763 201 aa10.99□□□□□ -0.65
CDK5RAP3-237ENST00000585163 TMEM97Q5BJF2 176 aa10.99□□□□□ -0.65
CDK5RAP3-237ENST00000585163 SHISA2Q6UWI4 295 aa10.99□□□□□ -0.65
CDK5RAP3-237ENST00000585163 ZNF502Q8TBZ5 544 aa10.99□□□□□ -0.65
CDK5RAP3-237ENST00000585163 IFI27L1Q96BM0 104 aa10.99□□□□□ -0.65
CDK5RAP3-237ENST00000585163 BUB3O43684 328 aa10.99□□□□□ -0.65
CDK5RAP3-237ENST00000585163 SEC11AP67812 179 aa10.99□□□□□ -0.65
CDK5RAP3-237ENST00000585163 C15orf32Q32M92 178 aa10.99□□□□□ -0.65
CDK5RAP3-237ENST00000585163 AMMECR1LQ6DCA0 310 aa10.99□□□□□ -0.65
CDK5RAP3-237ENST00000585163 BOD1L2Q8IYS8 172 aa10.99□□□□□ -0.65
CDK5RAP3-237ENST00000585163 FAM110DQ8TAY7 271 aaPredicted RBP10.99□□□□□ -0.65
CDK5RAP3-237ENST00000585163 RNF185Q96GF1 192 aa10.99□□□□□ -0.65
CDK5RAP3-237ENST00000585163 ZFAND3Q9H8U3 227 aa10.99□□□□□ -0.65
CDK5RAP3-237ENST00000585163 MSRB1Q9NZV6 116 aa10.99□□□□□ -0.65
CDK5RAP3-237ENST00000585163 SMPXQ9UHP9 88 aa10.99□□□□□ -0.65
CDK5RAP3-237ENST00000585163 RAB9AP51151 201 aa10.98□□□□□ -0.65
CDK5RAP3-237ENST00000585163 KLK9Q2XQG4 91 aa10.98□□□□□ -0.65
CDK5RAP3-237ENST00000585163 SIRPDQ9H106 197 aa10.98□□□□□ -0.65
CDK5RAP3-237ENST00000585163 KLK9Q9UKQ9 250 aa10.98□□□□□ -0.65
CDK5RAP3-237ENST00000585163 SPTA1P02549 2419 aa10.98□□□□□ -0.65
CDK5RAP3-237ENST00000585163 ATP6V0BQ99437 205 aa10.98□□□□□ -0.65
CDK5RAP3-237ENST00000585163 RBAKDNA6NC62 111 aa10.97□□□□□ -0.65
CDK5RAP3-237ENST00000585163 LINC01546A6NGU7 62 aa10.97□□□□□ -0.65
CDK5RAP3-237ENST00000585163 PRAC2D3DTV9 90 aa10.97□□□□□ -0.65
CDK5RAP3-237ENST00000585163 NDUFS7O75251 213 aa10.97□□□□□ -0.65
CDK5RAP3-237ENST00000585163 CLEC3BP05452 202 aa10.97□□□□□ -0.65
CDK5RAP3-237ENST00000585163 ERCC8Q13216 396 aa10.97□□□□□ -0.65
CDK5RAP3-237ENST00000585163 LINC01559Q495D7 138 aa10.97□□□□□ -0.65
CDK5RAP3-237ENST00000585163 PEF1Q9UBV8 284 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-237ENST00000585163 C7orf71A4D174 169 aa10.97□□□□□ -0.65
CDK5RAP3-237ENST00000585163 DTX2Q86UW9 622 aa10.97□□□□□ -0.65
CDK5RAP3-237ENST00000585163 MAP1LC3AQ9H492 121 aa10.97□□□□□ -0.65
CDK5RAP3-237ENST00000585163 TRAV8-6A0A0B4J262 113 aa10.96□□□□□ -0.65
CDK5RAP3-237ENST00000585163 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.96□□□□□ -0.65
CDK5RAP3-237ENST00000585163 WNK2Q9Y3S1 2297 aa10.96□□□□□ -0.66
CDK5RAP3-237ENST00000585163 A0A1B0GV72 72 aa10.96□□□□□ -0.66
CDK5RAP3-237ENST00000585163 SMAD7O15105 426 aaKnown RBP10.96□□□□□ -0.66
CDK5RAP3-237ENST00000585163 ECSCRQ19T08 205 aa10.96□□□□□ -0.66
CDK5RAP3-237ENST00000585163 OR9G4Q8NGQ1 327 aa10.96□□□□□ -0.66
CDK5RAP3-237ENST00000585163 AJUBAQ96IF1 538 aa10.96□□□□□ -0.66
CDK5RAP3-237ENST00000585163 CLPSL1A2RUU4 121 aa10.95□□□□□ -0.66
CDK5RAP3-237ENST00000585163 SIVA1O15304 175 aa10.95□□□□□ -0.66
CDK5RAP3-237ENST00000585163 ATP6V0E1O15342 81 aa10.95□□□□□ -0.66
CDK5RAP3-237ENST00000585163 GAS8-AS1O95177 125 aa10.95□□□□□ -0.66
CDK5RAP3-237ENST00000585163 OCIAD2Q56VL3 154 aa10.95□□□□□ -0.66
CDK5RAP3-237ENST00000585163 RNF182Q8N6D2 247 aa10.95□□□□□ -0.66
CDK5RAP3-237ENST00000585163 SLC50A1Q9BRV3 221 aa10.95□□□□□ -0.66
CDK5RAP3-237ENST00000585163 UBE2E1P51965 193 aa10.95□□□□□ -0.66
CDK5RAP3-237ENST00000585163 IL17RELQ6ZVW7 336 aa10.95□□□□□ -0.66
CDK5RAP3-237ENST00000585163 TNFRSF6BO95407 300 aa10.94□□□□□ -0.66
CDK5RAP3-237ENST00000585163 KLRB1Q12918 225 aa10.94□□□□□ -0.66
CDK5RAP3-237ENST00000585163 CCDC140Q96MF4 163 aa10.94□□□□□ -0.66
CDK5RAP3-237ENST00000585163 NXT2Q9NPJ8 142 aaKnown RBP10.94□□□□□ -0.66
CDK5RAP3-237ENST00000585163 A1L4Q6 167 aa10.94□□□□□ -0.66
CDK5RAP3-237ENST00000585163 DKK2Q9UBU2 259 aa10.94□□□□□ -0.66
CDK5RAP3-237ENST00000585163 SVEP1Q4LDE5 3571 aa10.94□□□□□ -0.66
CDK5RAP3-237ENST00000585163 ASH1LQ9NR48 2969 aaKnown RBP10.93□□□□□ -0.66
CDK5RAP3-237ENST00000585163 FCER1GP30273 86 aa10.93□□□□□ -0.66
CDK5RAP3-237ENST00000585163 ADAMTSL5Q6ZMM2 481 aa10.93□□□□□ -0.66
CDK5RAP3-237ENST00000585163 WFDC3Q8IUB2 231 aa10.93□□□□□ -0.66
CDK5RAP3-237ENST00000585163 CST9LQ9H4G1 147 aa10.93□□□□□ -0.66
CDK5RAP3-237ENST00000585163 IGKV3D-20A0A0C4DH25 116 aa10.93□□□□□ -0.66
CDK5RAP3-237ENST00000585163 LEPP41159 167 aa10.93□□□□□ -0.66
CDK5RAP3-237ENST00000585163 TCTAP57738 103 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms